RNA–Protein interactions for RNA: ENST00000506143.5

COL6A6-202, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 4,353 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-202ENST00000506143 SYNJ1O43426 1573 aa14.43□□□□□ -0.1
COL6A6-202ENST00000506143 FAM9BQ8IZU0 186 aa14.43□□□□□ -0.1
COL6A6-202ENST00000506143 ARID3CA6NKF2 412 aa14.43□□□□□ -0.1
COL6A6-202ENST00000506143 MTUS2Q5JR59 1369 aa14.43□□□□□ -0.1
COL6A6-202ENST00000506143 CARMIL1Q5VZK9 1371 aa14.41□□□□□ -0.1
COL6A6-202ENST00000506143 CCER2I3L3R5 266 aa14.41□□□□□ -0.1
COL6A6-202ENST00000506143 CUX2O14529 1486 aa14.4□□□□□ -0.1
COL6A6-202ENST00000506143 ZNF326Q5BKZ1 582 aaKnown RBP14.4□□□□□ -0.1
COL6A6-202ENST00000506143 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
COL6A6-202ENST00000506143 PPP1R15AO75807 674 aaPredicted RBP14.38□□□□□ -0.11
COL6A6-202ENST00000506143 RRP7BPQ9NSQ0 103 aa14.37□□□□□ -0.11
COL6A6-202ENST00000506143 FHAD1B1AJZ9 1412 aa14.36□□□□□ -0.11
COL6A6-202ENST00000506143 MYT1LQ9UL68 1186 aa14.36□□□□□ -0.11
COL6A6-202ENST00000506143 EIF4G2P78344 907 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL6A6-202ENST00000506143 MRS2Q9HD23 443 aa14.35□□□□□ -0.11
COL6A6-202ENST00000506143 ARAP1Q96P48 1450 aa14.33□□□□□ -0.12
COL6A6-202ENST00000506143 RTL5Q5HYW3 569 aaPredicted RBP14.33□□□□□ -0.12
COL6A6-202ENST00000506143 RRBP1Q9P2E9 1410 aaKnown RBP14.31□□□□□ -0.12
COL6A6-202ENST00000506143 MSH5O43196 834 aa14.3□□□□□ -0.12
COL6A6-202ENST00000506143 PRXQ9BXM0 1461 aa14.28□□□□□ -0.12
COL6A6-202ENST00000506143 NBR1Q14596 966 aa14.28□□□□□ -0.12
COL6A6-202ENST00000506143 DEKP35659 375 aaKnown RBP14.28□□□□□ -0.12
COL6A6-202ENST00000506143 FANCIQ9NVI1 1328 aa14.27□□□□□ -0.12
COL6A6-202ENST00000506143 ARHGAP35Q9NRY4 1499 aa14.27□□□□□ -0.13
COL6A6-202ENST00000506143 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
COL6A6-202ENST00000506143 ANP32AP39687 249 aaKnown RBP14.24□□□□□ -0.13
COL6A6-202ENST00000506143 IGF1RP08069 1367 aa14.24□□□□□ -0.13
COL6A6-202ENST00000506143 PPP4R2Q9NY27 417 aa14.23□□□□□ -0.13
COL6A6-202ENST00000506143 HSPA5P11021 654 aaKnown RBP14.22□□□□□ -0.13
COL6A6-202ENST00000506143 PHLDB1Q86UU1 1377 aa14.22□□□□□ -0.13
COL6A6-202ENST00000506143 CCDC136Q96JN2 1154 aa14.22□□□□□ -0.13
COL6A6-202ENST00000506143 ZNF777Q9ULD5 760 aaPredicted RBP14.22□□□□□ -0.13
COL6A6-202ENST00000506143 DAXXQ9UER7 740 aaPredicted RBP14.21□□□□□ -0.13
COL6A6-202ENST00000506143 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
COL6A6-202ENST00000506143 FHOD3Q2V2M9 1422 aa14.2□□□□□ -0.14
COL6A6-202ENST00000506143 B4GALNT3Q6L9W6 998 aa14.2□□□□□ -0.14
COL6A6-202ENST00000506143 SLC4A1APQ9BWU0 796 aaKnown RBP14.19□□□□□ -0.14
COL6A6-202ENST00000506143 TMC1Q8TDI8 760 aa14.18□□□□□ -0.14
COL6A6-202ENST00000506143 SENP3-EIF4A1A0A087X0R7 540 aa14.17□□□□□ -0.14
COL6A6-202ENST00000506143 NPM2Q86SE8 214 aaKnown RBP14.16□□□□□ -0.14
COL6A6-202ENST00000506143 NOP58Q9Y2X3 529 aaKnown RBP14.16□□□□□ -0.14
COL6A6-202ENST00000506143 LRRC9Q6ZRR7 1453 aa14.16□□□□□ -0.14
COL6A6-202ENST00000506143 CADPSQ9ULU8 1353 aa14.14□□□□□ -0.15
COL6A6-202ENST00000506143 SALL2Q9Y467 1007 aaPredicted RBP14.14□□□□□ -0.15
COL6A6-202ENST00000506143 FOXD1Q16676 465 aa14.13□□□□□ -0.15
COL6A6-202ENST00000506143 FMN1Q68DA7 1419 aa14.12□□□□□ -0.15
COL6A6-202ENST00000506143 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
COL6A6-202ENST00000506143 ERICH6BQ5W0A0 696 aa14.12□□□□□ -0.15
COL6A6-202ENST00000506143 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
COL6A6-202ENST00000506143 CUX1P39880 1505 aa14.11□□□□□ -0.15
COL6A6-202ENST00000506143 NCAPD3P42695 1498 aa14.1□□□□□ -0.15
COL6A6-202ENST00000506143 FBLN2P98095 1184 aa14.1□□□□□ -0.15
COL6A6-202ENST00000506143 MPHOSPH9Q99550 1183 aa14.1□□□□□ -0.15
COL6A6-202ENST00000506143 PEG3Q9GZU2 1588 aa14.1□□□□□ -0.15
COL6A6-202ENST00000506143 L3MBTL2Q969R5 705 aa14.09□□□□□ -0.15
COL6A6-202ENST00000506143 WDR97A6NE52 1622 aa14.09□□□□□ -0.15
COL6A6-202ENST00000506143 PRKCSHP14314 528 aaPredicted RBP14.08□□□□□ -0.16
COL6A6-202ENST00000506143 KDM2AQ9Y2K7 1162 aa14.08□□□□□ -0.16
COL6A6-202ENST00000506143 CCDC18Q5T9S5 1454 aa14.07□□□□□ -0.16
COL6A6-202ENST00000506143 CFTRP13569 1480 aa14.05□□□□□ -0.16
COL6A6-202ENST00000506143 FGD5Q6ZNL6 1462 aa14.05□□□□□ -0.16
COL6A6-202ENST00000506143 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
COL6A6-202ENST00000506143 FGD6Q6ZV73 1430 aa14.04□□□□□ -0.16
COL6A6-202ENST00000506143 TIAM1Q13009 1591 aa14.03□□□□□ -0.16
COL6A6-202ENST00000506143 PRKRIP1Q9H875 184 aaPredicted RBP14.03□□□□□ -0.16
COL6A6-202ENST00000506143 UACAQ9BZF9 1416 aa14.02□□□□□ -0.17
COL6A6-202ENST00000506143 UNC13AQ9UPW8 1703 aa14.01□□□□□ -0.17
COL6A6-202ENST00000506143 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
COL6A6-202ENST00000506143 CFDP1Q9UEE9 299 aaPredicted RBP14□□□□□ -0.17
COL6A6-202ENST00000506143 WASHC2AQ641Q2 1341 aa14□□□□□ -0.17
COL6A6-202ENST00000506143 MAPKBP1O60336 1514 aa14□□□□□ -0.17
COL6A6-202ENST00000506143 CARD11Q9BXL7 1154 aa13.99□□□□□ -0.17
COL6A6-202ENST00000506143 CASKIN1Q8WXD9 1431 aa13.98□□□□□ -0.17
COL6A6-202ENST00000506143 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
COL6A6-202ENST00000506143 TSPY4P0CV99 314 aa13.97□□□□□ -0.17
COL6A6-202ENST00000506143 TSPY10P0CW01 314 aa13.97□□□□□ -0.17
COL6A6-202ENST00000506143 ANO8Q9HCE9 1232 aaPredicted RBP13.97□□□□□ -0.17
COL6A6-202ENST00000506143 RAD54L2Q9Y4B4 1467 aa13.97□□□□□ -0.17
COL6A6-202ENST00000506143 IPO9Q96P70 1041 aaKnown RBP13.96□□□□□ -0.18
COL6A6-202ENST00000506143 FANCD2Q9BXW9 1451 aa13.96□□□□□ -0.18
COL6A6-202ENST00000506143 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
COL6A6-202ENST00000506143 BIVM-ERCC5R4GMW8 1640 aa13.94□□□□□ -0.18
COL6A6-202ENST00000506143 MYOM3Q5VTT5 1437 aa13.93□□□□□ -0.18
COL6A6-202ENST00000506143 MAP3K1Q13233 1512 aa13.93□□□□□ -0.18
COL6A6-202ENST00000506143 NUDCQ9Y266 331 aa13.93□□□□□ -0.18
COL6A6-202ENST00000506143 FYCO1Q9BQS8 1478 aa13.93□□□□□ -0.18
COL6A6-202ENST00000506143 CCDC184Q52MB2 194 aa13.92□□□□□ -0.18
COL6A6-202ENST00000506143 HMGXB3Q12766 1538 aa13.92□□□□□ -0.18
COL6A6-202ENST00000506143 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL6A6-202ENST00000506143 HFM1A2PYH4 1435 aa13.91□□□□□ -0.18
COL6A6-202ENST00000506143 PKD2Q13563 968 aa13.91□□□□□ -0.18
COL6A6-202ENST00000506143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL6A6-202ENST00000506143 CCDC7Q96M83 1385 aa13.9□□□□□ -0.18
COL6A6-202ENST00000506143 RGL3Q3MIN7 710 aa13.9□□□□□ -0.18
COL6A6-202ENST00000506143 LAS1LQ9Y4W2 734 aaKnown RBP13.9□□□□□ -0.18
COL6A6-202ENST00000506143 NCOA2Q15596 1464 aa13.9□□□□□ -0.19
COL6A6-202ENST00000506143 NEFMP07197 916 aa13.9□□□□□ -0.19
COL6A6-202ENST00000506143 CNTLNQ9NXG0 1405 aa13.88□□□□□ -0.19
COL6A6-202ENST00000506143 EIF5BO60841 1220 aaKnown RBP13.88□□□□□ -0.19
COL6A6-202ENST00000506143 CHMP7Q8WUX9 453 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms