RNA–Protein interactions for RNA: ENST00000505187.5

SPOCK3-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 2

Gene SPOCK3, Length 1,588 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-208	ENST00000505187	CLIP1	P30622	1438 aa		33.81	■■■■□ 3
SPOCK3-208	ENST00000505187	NUP160	Q12769	1436 aa		33.79	■■■■□ 3
SPOCK3-208	ENST00000505187	CEP170	Q5SW79	1584 aa		33.76	■■■■□ 3
SPOCK3-208	ENST00000505187	IQGAP2	Q13576	1575 aa		33.76	■■■□□ 2.99
SPOCK3-208	ENST00000505187	KIAA0586	Q9BVV6	1533 aa		33.75	■■■□□ 2.99
SPOCK3-208	ENST00000505187	FBLN2	P98095	1184 aa		33.75	■■■□□ 2.99
SPOCK3-208	ENST00000505187	EFCAB5	A4FU69	1503 aa		33.68	■■■□□ 2.98
SPOCK3-208	ENST00000505187	ARHGAP35	Q9NRY4	1499 aa		33.64	■■■□□ 2.98
SPOCK3-208	ENST00000505187	UGGT2	Q9NYU1	1516 aa		33.61	■■■□□ 2.97
SPOCK3-208	ENST00000505187	SAMD9	Q5K651	1589 aa		33.61	■■■□□ 2.97
SPOCK3-208	ENST00000505187	RANGAP1	P46060	587 aa	Predicted RBP	33.57	■■■□□ 2.96
SPOCK3-208	ENST00000505187	ARAP1	Q96P48	1450 aa		33.54	■■■□□ 2.96
SPOCK3-208	ENST00000505187	CLASP1	Q7Z460	1538 aa		33.48	■■■□□ 2.95
SPOCK3-208	ENST00000505187	VPS8	Q8N3P4	1428 aa		33.47	■■■□□ 2.95
SPOCK3-208	ENST00000505187	SHROOM2	Q13796	1616 aa		33.44	■■■□□ 2.94
SPOCK3-208	ENST00000505187	KIAA0556	O60303	1618 aa		33.42	■■■□□ 2.94
SPOCK3-208	ENST00000505187	JPH4	Q96JJ6	628 aa		33.4	■■■□□ 2.94
SPOCK3-208	ENST00000505187	DISP1	Q96F81	1524 aa		33.39	■■■□□ 2.94
SPOCK3-208	ENST00000505187	FHOD3	Q2V2M9	1422 aa		33.38	■■■□□ 2.93
SPOCK3-208	ENST00000505187	CARMIL2	Q6F5E8	1435 aa		33.34	■■■□□ 2.93
SPOCK3-208	ENST00000505187	FMN1	Q68DA7	1419 aa		33.32	■■■□□ 2.92
SPOCK3-208	ENST00000505187	P3H3	Q8IVL6	736 aa		33.3	■■■□□ 2.92
SPOCK3-208	ENST00000505187	OSCAR	Q8IYS5	282 aa		33.29	■■■□□ 2.92
SPOCK3-208	ENST00000505187	PRG4	Q92954	1404 aa	Predicted RBP	33.25	■■■□□ 2.91
SPOCK3-208	ENST00000505187	PCF11	O94913	1555 aa	Known RBP	33.19	■■■□□ 2.9
SPOCK3-208	ENST00000505187	CASKIN1	Q8WXD9	1431 aa		33.18	■■■□□ 2.9
SPOCK3-208	ENST00000505187	FYCO1	Q9BQS8	1478 aa		33.18	■■■□□ 2.9
SPOCK3-208	ENST00000505187	MAP3K1	Q13233	1512 aa		33.08	■■■□□ 2.89
SPOCK3-208	ENST00000505187	ERCC6L2	Q5T890	1561 aa		33.07	■■■□□ 2.89
SPOCK3-208	ENST00000505187	HECW1	Q76N89	1606 aa		33.06	■■■□□ 2.88
SPOCK3-208	ENST00000505187	APLP2	Q06481	763 aa		33.05	■■■□□ 2.88
SPOCK3-208	ENST00000505187	RAPGEF6	Q8TEU7	1601 aa		33.04	■■■□□ 2.88
SPOCK3-208	ENST00000505187	CFAP43	Q8NDM7	1665 aa		33.02	■■■□□ 2.88
SPOCK3-208	ENST00000505187	PTPRG	P23470	1445 aa		33.01	■■■□□ 2.87
SPOCK3-208	ENST00000505187	TIAM1	Q13009	1591 aa		32.99	■■■□□ 2.87
SPOCK3-208	ENST00000505187	ABCA8	O94911	1581 aa		32.98	■■■□□ 2.87
SPOCK3-208	ENST00000505187	LRRIQ1	Q96JM4	1722 aa		32.97	■■■□□ 2.87
SPOCK3-208	ENST00000505187	CCDC18	Q5T9S5	1454 aa		32.94	■■■□□ 2.86
SPOCK3-208	ENST00000505187	PLB1	Q6P1J6	1458 aa		32.91	■■■□□ 2.86
SPOCK3-208	ENST00000505187	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.89	■■■□□ 2.86
SPOCK3-208	ENST00000505187	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.88	■■■□□ 2.85
SPOCK3-208	ENST00000505187	NUP153	P49790	1475 aa	Known RBP	32.88	■■■□□ 2.85
SPOCK3-208	ENST00000505187	EPRS	P07814	1512 aa	Known RBP	32.88	■■■□□ 2.85
SPOCK3-208	ENST00000505187	UACA	Q9BZF9	1416 aa		32.84	■■■□□ 2.85
SPOCK3-208	ENST00000505187	ABCC2	Q92887	1545 aa		32.8	■■■□□ 2.84
SPOCK3-208	ENST00000505187	LRRC9	Q6ZRR7	1453 aa		32.8	■■■□□ 2.84
SPOCK3-208	ENST00000505187	UHRF1BP1L	A0JNW5	1464 aa		32.79	■■■□□ 2.84
SPOCK3-208	ENST00000505187	ARHGEF11	O15085	1522 aa		32.78	■■■□□ 2.84
SPOCK3-208	ENST00000505187	CDK13	Q14004	1512 aa	Known RBP	32.75	■■■□□ 2.83
SPOCK3-208	ENST00000505187	KANK4	Q5T7N3	995 aa	Predicted RBP	32.75	■■■□□ 2.83
SPOCK3-208	ENST00000505187	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.75	■■■□□ 2.83
SPOCK3-208	ENST00000505187	EHBP1L1	Q8N3D4	1523 aa		32.71	■■■□□ 2.83
SPOCK3-208	ENST00000505187	RIMBP3C	A6NJZ7	1639 aa		32.68	■■■□□ 2.82
SPOCK3-208	ENST00000505187	RIMBP3B	A6NNM3	1639 aa		32.68	■■■□□ 2.82
SPOCK3-208	ENST00000505187	RIMBP3	Q9UFD9	1639 aa		32.68	■■■□□ 2.82
SPOCK3-208	ENST00000505187	ATP10B	O94823	1461 aa		32.67	■■■□□ 2.82
SPOCK3-208	ENST00000505187	MTUS2	Q5JR59	1369 aa		32.66	■■■□□ 2.82
SPOCK3-208	ENST00000505187	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.64	■■■□□ 2.82
SPOCK3-208	ENST00000505187	MAGI3	Q5TCQ9	1506 aa		32.64	■■■□□ 2.82
SPOCK3-208	ENST00000505187	ADCY10	Q96PN6	1610 aa		32.63	■■■□□ 2.81
SPOCK3-208	ENST00000505187	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.61	■■■□□ 2.81
SPOCK3-208	ENST00000505187	KDM5B	Q9UGL1	1544 aa		32.61	■■■□□ 2.81
SPOCK3-208	ENST00000505187	ARID3C	A6NKF2	412 aa		32.58	■■■□□ 2.81
SPOCK3-208	ENST00000505187	TRIM26	Q12899	539 aa	Predicted RBP	32.58	■■■□□ 2.81
SPOCK3-208	ENST00000505187	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.57	■■■□□ 2.8
SPOCK3-208	ENST00000505187	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.56	■■■□□ 2.8
SPOCK3-208	ENST00000505187	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.56	■■■□□ 2.8
SPOCK3-208	ENST00000505187	TRO	Q12816	1431 aa	Predicted RBP	32.54	■■■□□ 2.8
SPOCK3-208	ENST00000505187	NCOA2	Q15596	1464 aa		32.48	■■■□□ 2.79
SPOCK3-208	ENST00000505187	PLEKHD1	A6NEE1	506 aa		32.48	■■■□□ 2.79
SPOCK3-208	ENST00000505187	KIF14	Q15058	1648 aa		32.41	■■■□□ 2.78
SPOCK3-208	ENST00000505187	PHLDB1	Q86UU1	1377 aa		32.41	■■■□□ 2.78
SPOCK3-208	ENST00000505187	RRBP1	Q9P2E9	1410 aa	Known RBP	32.4	■■■□□ 2.78
SPOCK3-208	ENST00000505187	MYOM3	Q5VTT5	1437 aa		32.35	■■■□□ 2.77
SPOCK3-208	ENST00000505187	NPM1	P06748	294 aa	Known RBP eCLIP	32.33	■■■□□ 2.77
SPOCK3-208	ENST00000505187	CYB5RL	Q6IPT4	315 aa		32.33	■■■□□ 2.77
SPOCK3-208	ENST00000505187	ITSN2	Q9NZM3	1697 aa		32.31	■■■□□ 2.76
SPOCK3-208	ENST00000505187	ABCC10	Q5T3U5	1492 aa		32.29	■■■□□ 2.76
SPOCK3-208	ENST00000505187	WDR7	Q9Y4E6	1490 aa		32.29	■■■□□ 2.76
SPOCK3-208	ENST00000505187	PCGF6	Q9BYE7	350 aa		32.29	■■■□□ 2.76
SPOCK3-208	ENST00000505187	CCNB3	Q8WWL7	1395 aa		32.29	■■■□□ 2.76
SPOCK3-208	ENST00000505187	FGD6	Q6ZV73	1430 aa		32.28	■■■□□ 2.76
SPOCK3-208	ENST00000505187	MIA2	Q96PC5	1412 aa		32.25	■■■□□ 2.75
SPOCK3-208	ENST00000505187	ASXL2	Q76L83	1435 aa		32.24	■■■□□ 2.75
SPOCK3-208	ENST00000505187	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.23	■■■□□ 2.75
SPOCK3-208	ENST00000505187	CDC42BPA	Q5VT25	1732 aa		32.23	■■■□□ 2.75
SPOCK3-208	ENST00000505187	MAPKBP1	O60336	1514 aa		32.22	■■■□□ 2.75
SPOCK3-208	ENST00000505187	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.2	■■■□□ 2.75
SPOCK3-208	ENST00000505187	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.2	■■■□□ 2.74
SPOCK3-208	ENST00000505187	PTPN23	Q9H3S7	1636 aa		32.18	■■■□□ 2.74
SPOCK3-208	ENST00000505187	TTC37	Q6PGP7	1564 aa		32.17	■■■□□ 2.74
SPOCK3-208	ENST00000505187	TCOF1	Q13428	1488 aa	Known RBP	32.17	■■■□□ 2.74
SPOCK3-208	ENST00000505187	MYO5C	Q9NQX4	1742 aa		32.16	■■■□□ 2.74
SPOCK3-208	ENST00000505187	PREX2	Q70Z35	1606 aa		32.15	■■■□□ 2.74
SPOCK3-208	ENST00000505187	ABCA9	Q8IUA7	1624 aa		32.13	■■■□□ 2.73
SPOCK3-208	ENST00000505187	CDC42BPB	Q9Y5S2	1711 aa		32.11	■■■□□ 2.73
SPOCK3-208	ENST00000505187	KCNH8	Q96L42	1107 aa		32.1	■■■□□ 2.73
SPOCK3-208	ENST00000505187	ARAP3	Q8WWN8	1544 aa		32.06	■■■□□ 2.72
SPOCK3-208	ENST00000505187	DNAJC5	Q9H3Z4	198 aa		32.06	■■■□□ 2.72
SPOCK3-208	ENST00000505187	FAM50A	Q14320	339 aa	Known RBP	32.05	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms