RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 KIAA0586Q9BVV6 1533 aa16.37■□□□□ 0.21
NR1I3-220ENST00000505005 JPH4Q96JJ6 628 aa16.36■□□□□ 0.21
NR1I3-220ENST00000505005 CEP170Q5SW79 1584 aa16.35■□□□□ 0.21
NR1I3-220ENST00000505005 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
NR1I3-220ENST00000505005 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
NR1I3-220ENST00000505005 CYB5RLQ6IPT4 315 aa16.31■□□□□ 0.2
NR1I3-220ENST00000505005 SHROOM2Q13796 1616 aa16.3■□□□□ 0.2
NR1I3-220ENST00000505005 CARMIL2Q6F5E8 1435 aa16.29■□□□□ 0.2
NR1I3-220ENST00000505005 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.2
NR1I3-220ENST00000505005 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
NR1I3-220ENST00000505005 PRG4Q92954 1404 aaPredicted RBP16.27■□□□□ 0.19
NR1I3-220ENST00000505005 IQGAP2Q13576 1575 aa16.24■□□□□ 0.19
NR1I3-220ENST00000505005 ARAP1Q96P48 1450 aa16.23■□□□□ 0.19
NR1I3-220ENST00000505005 GOLGA3Q08378 1498 aa16.2■□□□□ 0.18
NR1I3-220ENST00000505005 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
NR1I3-220ENST00000505005 CTTNBP2Q8WZ74 1663 aa16.17■□□□□ 0.18
NR1I3-220ENST00000505005 TNIKQ9UKE5 1360 aa16.16■□□□□ 0.18
NR1I3-220ENST00000505005 UGGT2Q9NYU1 1516 aa16.15■□□□□ 0.18
NR1I3-220ENST00000505005 PTPRGP23470 1445 aa16.14■□□□□ 0.17
NR1I3-220ENST00000505005 KIF21BO75037 1637 aa16.13■□□□□ 0.17
NR1I3-220ENST00000505005 ERCC6L2Q5T890 1561 aa16.08■□□□□ 0.16
NR1I3-220ENST00000505005 UBTFP17480 764 aaKnown RBP16.07■□□□□ 0.16
NR1I3-220ENST00000505005 DISP1Q96F81 1524 aa16.04■□□□□ 0.16
NR1I3-220ENST00000505005 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
NR1I3-220ENST00000505005 KIAA0556O60303 1618 aa16.03■□□□□ 0.16
NR1I3-220ENST00000505005 UHRF1BP1LA0JNW5 1464 aa16.02■□□□□ 0.15
NR1I3-220ENST00000505005 UACAQ9BZF9 1416 aa16.02■□□□□ 0.15
NR1I3-220ENST00000505005 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
NR1I3-220ENST00000505005 ABCC2Q92887 1545 aa15.96■□□□□ 0.15
NR1I3-220ENST00000505005 MAPKBP1O60336 1514 aa15.95■□□□□ 0.14
NR1I3-220ENST00000505005 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
NR1I3-220ENST00000505005 SAMD9Q5K651 1589 aa15.94■□□□□ 0.14
NR1I3-220ENST00000505005 ADCY10Q96PN6 1610 aa15.93■□□□□ 0.14
NR1I3-220ENST00000505005 PLB1Q6P1J6 1458 aa15.92■□□□□ 0.14
NR1I3-220ENST00000505005 KDM5BQ9UGL1 1544 aa15.9■□□□□ 0.14
NR1I3-220ENST00000505005 FMN1Q68DA7 1419 aa15.89■□□□□ 0.13
NR1I3-220ENST00000505005 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
NR1I3-220ENST00000505005 ABCC10Q5T3U5 1492 aa15.86■□□□□ 0.13
NR1I3-220ENST00000505005 ABCA8O94911 1581 aa15.86■□□□□ 0.13
NR1I3-220ENST00000505005 RANGAP1P46060 587 aaPredicted RBP15.84■□□□□ 0.13
NR1I3-220ENST00000505005 FAM69CQ0P6D2 419 aa15.84■□□□□ 0.13
NR1I3-220ENST00000505005 PLPPR3Q6T4P5 718 aa15.84■□□□□ 0.13
NR1I3-220ENST00000505005 CDK11AQ9UQ88 783 aaPredicted RBP15.83■□□□□ 0.12
NR1I3-220ENST00000505005 ASXL2Q76L83 1435 aa15.82■□□□□ 0.12
NR1I3-220ENST00000505005 RAPGEF6Q8TEU7 1601 aa15.81■□□□□ 0.12
NR1I3-220ENST00000505005 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
NR1I3-220ENST00000505005 ZCCHC11Q5TAX3 1644 aaKnown RBP15.79■□□□□ 0.12
NR1I3-220ENST00000505005 FHOD3Q2V2M9 1422 aa15.79■□□□□ 0.12
NR1I3-220ENST00000505005 PLEKHD1A6NEE1 506 aa15.79■□□□□ 0.12
NR1I3-220ENST00000505005 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
NR1I3-220ENST00000505005 HNRNPUL2Q1KMD3 747 aaKnown RBP15.79■□□□□ 0.12
NR1I3-220ENST00000505005 GLI2P10070 1586 aa15.79■□□□□ 0.12
NR1I3-220ENST00000505005 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
NR1I3-220ENST00000505005 ARHGAP35Q9NRY4 1499 aa15.77■□□□□ 0.11
NR1I3-220ENST00000505005 DIP2BQ9P265 1576 aa15.76■□□□□ 0.11
NR1I3-220ENST00000505005 CLIP1P30622 1438 aa15.76■□□□□ 0.11
NR1I3-220ENST00000505005 KIF13AQ9H1H9 1805 aa15.75■□□□□ 0.11
NR1I3-220ENST00000505005 ATP10BO94823 1461 aa15.74■□□□□ 0.11
NR1I3-220ENST00000505005 TEX14Q8IWB6 1497 aa15.73■□□□□ 0.11
NR1I3-220ENST00000505005 HECW1Q76N89 1606 aa15.72■□□□□ 0.11
NR1I3-220ENST00000505005 EPRSP07814 1512 aaKnown RBP15.72■□□□□ 0.11
NR1I3-220ENST00000505005 ATP1B4Q9UN42 357 aaPredicted RBP15.7■□□□□ 0.1
NR1I3-220ENST00000505005 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
NR1I3-220ENST00000505005 NUP153P49790 1475 aaKnown RBP15.7■□□□□ 0.1
NR1I3-220ENST00000505005 CCDC18Q5T9S5 1454 aa15.68■□□□□ 0.1
NR1I3-220ENST00000505005 KCNH8Q96L42 1107 aa15.68■□□□□ 0.1
NR1I3-220ENST00000505005 CASKIN1Q8WXD9 1431 aa15.68■□□□□ 0.1
NR1I3-220ENST00000505005 CFAP43Q8NDM7 1665 aa15.67■□□□□ 0.1
NR1I3-220ENST00000505005 CEP162Q5TB80 1403 aa15.65■□□□□ 0.1
NR1I3-220ENST00000505005 CD109Q6YHK3 1445 aa15.65■□□□□ 0.1
NR1I3-220ENST00000505005 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
NR1I3-220ENST00000505005 MAP3K4Q9Y6R4 1608 aa15.64■□□□□ 0.09
NR1I3-220ENST00000505005 MAGI3Q5TCQ9 1506 aa15.63■□□□□ 0.09
NR1I3-220ENST00000505005 ARID3CA6NKF2 412 aa15.61■□□□□ 0.09
NR1I3-220ENST00000505005 TSPOAP1O95153 1857 aa15.6■□□□□ 0.09
NR1I3-220ENST00000505005 ABCA9Q8IUA7 1624 aa15.59■□□□□ 0.09
NR1I3-220ENST00000505005 LOC105371045A0A1W2PR82 267 aa15.58■□□□□ 0.08
NR1I3-220ENST00000505005 TROQ12816 1431 aaPredicted RBP15.57■□□□□ 0.08
NR1I3-220ENST00000505005 NEO1Q92859 1461 aa15.56■□□□□ 0.08
NR1I3-220ENST00000505005 KDM6BO15054 1643 aa15.56■□□□□ 0.08
NR1I3-220ENST00000505005 APLP2Q06481 763 aa15.55■□□□□ 0.08
NR1I3-220ENST00000505005 CFAP74Q9C0B2 1584 aa15.54■□□□□ 0.08
NR1I3-220ENST00000505005 KIF14Q15058 1648 aa15.53■□□□□ 0.08
NR1I3-220ENST00000505005 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
NR1I3-220ENST00000505005 CDK13Q14004 1512 aaKnown RBP15.53■□□□□ 0.08
NR1I3-220ENST00000505005 EFCAB2Q5VUJ9 269 aa15.52■□□□□ 0.08
NR1I3-220ENST00000505005 ARAP3Q8WWN8 1544 aa15.52■□□□□ 0.07
NR1I3-220ENST00000505005 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
NR1I3-220ENST00000505005 MTUS2Q5JR59 1369 aa15.5■□□□□ 0.07
NR1I3-220ENST00000505005 PPRC1Q5VV67 1664 aaKnown RBP15.5■□□□□ 0.07
NR1I3-220ENST00000505005 PLCH2O75038 1416 aa15.49■□□□□ 0.07
NR1I3-220ENST00000505005 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.48■□□□□ 0.07
NR1I3-220ENST00000505005 MAP3K1Q13233 1512 aa15.47■□□□□ 0.07
NR1I3-220ENST00000505005 FANCAO15360 1455 aa15.46■□□□□ 0.06
NR1I3-220ENST00000505005 MYO5CQ9NQX4 1742 aa15.45■□□□□ 0.06
NR1I3-220ENST00000505005 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
NR1I3-220ENST00000505005 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
NR1I3-220ENST00000505005 LRRIQ1Q96JM4 1722 aa15.42■□□□□ 0.06
NR1I3-220ENST00000505005 DENND4BO75064 1496 aaPredicted RBP15.41■□□□□ 0.06
NR1I3-220ENST00000505005 CCNB3Q8WWL7 1395 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms