RNA–Protein interactions for RNA: ENST00000504963.5

SDHC-207, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 4

Gene SDHC, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-207ENST00000504963 NUP160Q12769 1436 aa11.12□□□□□ -0.63
SDHC-207ENST00000504963 GOLGA3Q08378 1498 aa11.1□□□□□ -0.63
SDHC-207ENST00000504963 EHMT2Q96KQ7 1210 aa11.09□□□□□ -0.63
SDHC-207ENST00000504963 CTTNBP2Q8WZ74 1663 aa11.08□□□□□ -0.64
SDHC-207ENST00000504963 CLASP1Q7Z460 1538 aa11.08□□□□□ -0.64
SDHC-207ENST00000504963 CHMP7Q8WUX9 453 aaPredicted RBP11.06□□□□□ -0.64
SDHC-207ENST00000504963 FBLN2P98095 1184 aa11.05□□□□□ -0.64
SDHC-207ENST00000504963 KIAA0586Q9BVV6 1533 aa11.04□□□□□ -0.64
SDHC-207ENST00000504963 SHROOM2Q13796 1616 aa11.03□□□□□ -0.64
SDHC-207ENST00000504963 IQGAP2Q13576 1575 aa11.03□□□□□ -0.64
SDHC-207ENST00000504963 TNIKQ9UKE5 1360 aa11.03□□□□□ -0.64
SDHC-207ENST00000504963 ERCC6L2Q5T890 1561 aa11.02□□□□□ -0.65
SDHC-207ENST00000504963 RIMBP3CA6NJZ7 1639 aa11.01□□□□□ -0.65
SDHC-207ENST00000504963 RIMBP3BA6NNM3 1639 aa11.01□□□□□ -0.65
SDHC-207ENST00000504963 RIMBP3Q9UFD9 1639 aa11.01□□□□□ -0.65
SDHC-207ENST00000504963 UGGT2Q9NYU1 1516 aa10.99□□□□□ -0.65
SDHC-207ENST00000504963 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
SDHC-207ENST00000504963 DISP1Q96F81 1524 aa10.99□□□□□ -0.65
SDHC-207ENST00000504963 SAMD9Q5K651 1589 aa10.99□□□□□ -0.65
SDHC-207ENST00000504963 UBTFP17480 764 aaKnown RBP10.98□□□□□ -0.65
SDHC-207ENST00000504963 ARHGEF11O15085 1522 aa10.98□□□□□ -0.65
SDHC-207ENST00000504963 ARHGAP35Q9NRY4 1499 aa10.97□□□□□ -0.65
SDHC-207ENST00000504963 CEP162Q5TB80 1403 aa10.95□□□□□ -0.66
SDHC-207ENST00000504963 MSH5O43196 834 aa10.94□□□□□ -0.66
SDHC-207ENST00000504963 JPH4Q96JJ6 628 aa10.94□□□□□ -0.66
SDHC-207ENST00000504963 KIAA0556O60303 1618 aa10.94□□□□□ -0.66
SDHC-207ENST00000504963 ARAP1Q96P48 1450 aa10.93□□□□□ -0.66
SDHC-207ENST00000504963 CLIP1P30622 1438 aa10.92□□□□□ -0.66
SDHC-207ENST00000504963 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
SDHC-207ENST00000504963 FHOD3Q2V2M9 1422 aa10.9□□□□□ -0.66
SDHC-207ENST00000504963 EFCAB5A4FU69 1503 aa10.89□□□□□ -0.67
SDHC-207ENST00000504963 RANGAP1P46060 587 aaPredicted RBP10.89□□□□□ -0.67
SDHC-207ENST00000504963 P3H3Q8IVL6 736 aa10.87□□□□□ -0.67
SDHC-207ENST00000504963 LRRIQ1Q96JM4 1722 aa10.85□□□□□ -0.67
SDHC-207ENST00000504963 ABCA8O94911 1581 aa10.82□□□□□ -0.68
SDHC-207ENST00000504963 PCF11O94913 1555 aaKnown RBP10.82□□□□□ -0.68
SDHC-207ENST00000504963 CARMIL2Q6F5E8 1435 aa10.82□□□□□ -0.68
SDHC-207ENST00000504963 PLB1Q6P1J6 1458 aa10.81□□□□□ -0.68
SDHC-207ENST00000504963 VPS8Q8N3P4 1428 aa10.8□□□□□ -0.68
SDHC-207ENST00000504963 PTPRGP23470 1445 aa10.79□□□□□ -0.68
SDHC-207ENST00000504963 ADCY10Q96PN6 1610 aa10.79□□□□□ -0.68
SDHC-207ENST00000504963 RAPGEF6Q8TEU7 1601 aa10.78□□□□□ -0.68
SDHC-207ENST00000504963 CYB5RLQ6IPT4 315 aa10.78□□□□□ -0.68
SDHC-207ENST00000504963 NUP153P49790 1475 aaKnown RBP10.77□□□□□ -0.69
SDHC-207ENST00000504963 CASKIN1Q8WXD9 1431 aa10.75□□□□□ -0.69
SDHC-207ENST00000504963 ABCC2Q92887 1545 aa10.75□□□□□ -0.69
SDHC-207ENST00000504963 TRHP20396 242 aaPredicted RBP10.75□□□□□ -0.69
SDHC-207ENST00000504963 TTBK1Q5TCY1 1321 aaPredicted RBP10.75□□□□□ -0.69
SDHC-207ENST00000504963 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
SDHC-207ENST00000504963 UACAQ9BZF9 1416 aa10.75□□□□□ -0.69
SDHC-207ENST00000504963 UHRF1BP1LA0JNW5 1464 aa10.74□□□□□ -0.69
SDHC-207ENST00000504963 FYCO1Q9BQS8 1478 aa10.74□□□□□ -0.69
SDHC-207ENST00000504963 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
SDHC-207ENST00000504963 MAGI3Q5TCQ9 1506 aa10.73□□□□□ -0.69
SDHC-207ENST00000504963 ATP10BO94823 1461 aa10.72□□□□□ -0.69
SDHC-207ENST00000504963 HECW1Q76N89 1606 aa10.72□□□□□ -0.69
SDHC-207ENST00000504963 EPRSP07814 1512 aaKnown RBP10.71□□□□□ -0.69
SDHC-207ENST00000504963 ZCCHC11Q5TAX3 1644 aaKnown RBP10.71□□□□□ -0.69
SDHC-207ENST00000504963 CFAP43Q8NDM7 1665 aa10.71□□□□□ -0.69
SDHC-207ENST00000504963 KDM5BQ9UGL1 1544 aa10.71□□□□□ -0.69
SDHC-207ENST00000504963 TIAM1Q13009 1591 aa10.69□□□□□ -0.7
SDHC-207ENST00000504963 ARID3CA6NKF2 412 aa10.68□□□□□ -0.7
SDHC-207ENST00000504963 MAP3K1Q13233 1512 aa10.67□□□□□ -0.7
SDHC-207ENST00000504963 KANK4Q5T7N3 995 aaPredicted RBP10.66□□□□□ -0.7
SDHC-207ENST00000504963 CCDC18Q5T9S5 1454 aa10.63□□□□□ -0.71
SDHC-207ENST00000504963 KIF14Q15058 1648 aa10.62□□□□□ -0.71
SDHC-207ENST00000504963 LRRC9Q6ZRR7 1453 aa10.62□□□□□ -0.71
SDHC-207ENST00000504963 ATP1B4Q9UN42 357 aaPredicted RBP10.61□□□□□ -0.71
SDHC-207ENST00000504963 ASXL2Q76L83 1435 aa10.6□□□□□ -0.71
SDHC-207ENST00000504963 MAPKBP1O60336 1514 aa10.6□□□□□ -0.71
SDHC-207ENST00000504963 KIF13AQ9H1H9 1805 aa10.6□□□□□ -0.71
SDHC-207ENST00000504963 TROQ12816 1431 aaPredicted RBP10.59□□□□□ -0.71
SDHC-207ENST00000504963 PPARGC1BQ86YN6 1023 aaKnown RBP10.59□□□□□ -0.71
SDHC-207ENST00000504963 ABCC10Q5T3U5 1492 aa10.59□□□□□ -0.71
SDHC-207ENST00000504963 EHBP1L1Q8N3D4 1523 aa10.58□□□□□ -0.72
SDHC-207ENST00000504963 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
SDHC-207ENST00000504963 TTC37Q6PGP7 1564 aa10.57□□□□□ -0.72
SDHC-207ENST00000504963 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.56□□□□□ -0.72
SDHC-207ENST00000504963 DIP2BQ9P265 1576 aa10.56□□□□□ -0.72
SDHC-207ENST00000504963 CDC42BPAQ5VT25 1732 aa10.55□□□□□ -0.72
SDHC-207ENST00000504963 PIAS4Q8N2W9 510 aaPredicted RBP10.55□□□□□ -0.72
SDHC-207ENST00000504963 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
SDHC-207ENST00000504963 PHLDB1Q86UU1 1377 aa10.54□□□□□ -0.72
SDHC-207ENST00000504963 SUPT6HQ7KZ85 1726 aaKnown RBP10.54□□□□□ -0.72
SDHC-207ENST00000504963 ILDR1Q86SU0 546 aaPredicted RBP10.54□□□□□ -0.72
SDHC-207ENST00000504963 ABCA9Q8IUA7 1624 aa10.54□□□□□ -0.72
SDHC-207ENST00000504963 MTUS2Q5JR59 1369 aa10.53□□□□□ -0.72
SDHC-207ENST00000504963 CDC42BPBQ9Y5S2 1711 aa10.53□□□□□ -0.72
SDHC-207ENST00000504963 PPRC1Q5VV67 1664 aaKnown RBP10.53□□□□□ -0.72
SDHC-207ENST00000504963 GLI2P10070 1586 aa10.52□□□□□ -0.72
SDHC-207ENST00000504963 PLEKHD1A6NEE1 506 aa10.52□□□□□ -0.73
SDHC-207ENST00000504963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.52□□□□□ -0.73
SDHC-207ENST00000504963 HNRNPUL2Q1KMD3 747 aaKnown RBP10.52□□□□□ -0.73
SDHC-207ENST00000504963 GPATCH8Q9UKJ3 1502 aaKnown RBP10.51□□□□□ -0.73
SDHC-207ENST00000504963 MAP3K4Q9Y6R4 1608 aa10.51□□□□□ -0.73
SDHC-207ENST00000504963 PREX2Q70Z35 1606 aa10.5□□□□□ -0.73
SDHC-207ENST00000504963 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
SDHC-207ENST00000504963 KCNH8Q96L42 1107 aa10.49□□□□□ -0.73
SDHC-207ENST00000504963 MYO5CQ9NQX4 1742 aa10.49□□□□□ -0.73
SDHC-207ENST00000504963 CDK11AQ9UQ88 783 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms