RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 FHOD3Q2V2M9 1422 aa13.71□□□□□ -0.21
LINC02239-201ENST00000504339 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.21
LINC02239-201ENST00000504339 RRBP1Q9P2E9 1410 aaKnown RBP13.7□□□□□ -0.22
LINC02239-201ENST00000504339 MAP3K1Q13233 1512 aa13.7□□□□□ -0.22
LINC02239-201ENST00000504339 TIAM1Q13009 1591 aa13.69□□□□□ -0.22
LINC02239-201ENST00000504339 CTTNBP2Q8WZ74 1663 aa13.67□□□□□ -0.22
LINC02239-201ENST00000504339 PCF11O94913 1555 aaKnown RBP13.67□□□□□ -0.22
LINC02239-201ENST00000504339 FHAD1B1AJZ9 1412 aa13.67□□□□□ -0.22
LINC02239-201ENST00000504339 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
LINC02239-201ENST00000504339 WDR62O43379 1518 aa13.67□□□□□ -0.22
LINC02239-201ENST00000504339 ZNF608Q9ULD9 1512 aaPredicted RBP13.66□□□□□ -0.22
LINC02239-201ENST00000504339 LRRC9Q6ZRR7 1453 aa13.65□□□□□ -0.22
LINC02239-201ENST00000504339 CCNB3Q8WWL7 1395 aa13.63□□□□□ -0.23
LINC02239-201ENST00000504339 CASKIN1Q8WXD9 1431 aa13.62□□□□□ -0.23
LINC02239-201ENST00000504339 SAMD9Q5K651 1589 aa13.62□□□□□ -0.23
LINC02239-201ENST00000504339 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
LINC02239-201ENST00000504339 PBRM1Q86U86 1689 aa13.62□□□□□ -0.23
LINC02239-201ENST00000504339 PHLDB1Q86UU1 1377 aa13.62□□□□□ -0.23
LINC02239-201ENST00000504339 SNAPC4Q5SXM2 1469 aa13.61□□□□□ -0.23
LINC02239-201ENST00000504339 FYCO1Q9BQS8 1478 aa13.61□□□□□ -0.23
LINC02239-201ENST00000504339 GRIN2BQ13224 1484 aa13.6□□□□□ -0.23
LINC02239-201ENST00000504339 ADAMTS12P58397 1594 aa13.6□□□□□ -0.23
LINC02239-201ENST00000504339 CFAP43Q8NDM7 1665 aa13.59□□□□□ -0.23
LINC02239-201ENST00000504339 FMN1Q68DA7 1419 aa13.57□□□□□ -0.24
LINC02239-201ENST00000504339 ATP1B4Q9UN42 357 aaPredicted RBP13.57□□□□□ -0.24
LINC02239-201ENST00000504339 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
LINC02239-201ENST00000504339 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
LINC02239-201ENST00000504339 DHX57Q6P158 1386 aaKnown RBP13.54□□□□□ -0.24
LINC02239-201ENST00000504339 LRRIQ1Q96JM4 1722 aa13.52□□□□□ -0.25
LINC02239-201ENST00000504339 EIF4G3O43432 1585 aaKnown RBP13.52□□□□□ -0.25
LINC02239-201ENST00000504339 IQGAP2Q13576 1575 aa13.52□□□□□ -0.25
LINC02239-201ENST00000504339 ITGAEP38570 1179 aa13.51□□□□□ -0.25
LINC02239-201ENST00000504339 GRIN2AQ12879 1464 aa13.47□□□□□ -0.25
LINC02239-201ENST00000504339 UGGT2Q9NYU1 1516 aa13.47□□□□□ -0.25
LINC02239-201ENST00000504339 KIAA0586Q9BVV6 1533 aa13.46□□□□□ -0.25
LINC02239-201ENST00000504339 MAGI3Q5TCQ9 1506 aa13.46□□□□□ -0.26
LINC02239-201ENST00000504339 RAB3GAP2Q9H2M9 1393 aa13.45□□□□□ -0.26
LINC02239-201ENST00000504339 FAM50AQ14320 339 aaKnown RBP13.45□□□□□ -0.26
LINC02239-201ENST00000504339 DISP1Q96F81 1524 aa13.45□□□□□ -0.26
LINC02239-201ENST00000504339 CLSPNQ9HAW4 1339 aa13.44□□□□□ -0.26
LINC02239-201ENST00000504339 MTUS2Q5JR59 1369 aa13.44□□□□□ -0.26
LINC02239-201ENST00000504339 MAGI1Q96QZ7 1491 aaPredicted RBP13.43□□□□□ -0.26
LINC02239-201ENST00000504339 FGD6Q6ZV73 1430 aa13.43□□□□□ -0.26
LINC02239-201ENST00000504339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.43□□□□□ -0.26
LINC02239-201ENST00000504339 NCOA2Q15596 1464 aa13.41□□□□□ -0.26
LINC02239-201ENST00000504339 SETD5Q9C0A6 1442 aa13.41□□□□□ -0.26
LINC02239-201ENST00000504339 ARHGEF11O15085 1522 aa13.41□□□□□ -0.26
LINC02239-201ENST00000504339 SYNJ2O15056 1496 aa13.4□□□□□ -0.26
LINC02239-201ENST00000504339 PTPRKQ15262 1439 aa13.4□□□□□ -0.26
LINC02239-201ENST00000504339 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
LINC02239-201ENST00000504339 EPRSP07814 1512 aaKnown RBP13.4□□□□□ -0.26
LINC02239-201ENST00000504339 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
LINC02239-201ENST00000504339 KIAA0556O60303 1618 aa13.39□□□□□ -0.27
LINC02239-201ENST00000504339 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
LINC02239-201ENST00000504339 CDK13Q14004 1512 aaKnown RBP13.38□□□□□ -0.27
LINC02239-201ENST00000504339 MAPKBP1O60336 1514 aa13.38□□□□□ -0.27
LINC02239-201ENST00000504339 EHBP1L1Q8N3D4 1523 aa13.38□□□□□ -0.27
LINC02239-201ENST00000504339 CCDC18Q5T9S5 1454 aa13.38□□□□□ -0.27
LINC02239-201ENST00000504339 MYOM3Q5VTT5 1437 aa13.37□□□□□ -0.27
LINC02239-201ENST00000504339 DIEXFQ68CQ4 756 aaKnown RBP13.37□□□□□ -0.27
LINC02239-201ENST00000504339 HECW1Q76N89 1606 aa13.37□□□□□ -0.27
LINC02239-201ENST00000504339 NUP160Q12769 1436 aa13.36□□□□□ -0.27
LINC02239-201ENST00000504339 ARID3CA6NKF2 412 aa13.36□□□□□ -0.27
LINC02239-201ENST00000504339 FBLN2P98095 1184 aa13.34□□□□□ -0.27
LINC02239-201ENST00000504339 SUPT6HQ7KZ85 1726 aaKnown RBP13.34□□□□□ -0.27
LINC02239-201ENST00000504339 NUP153P49790 1475 aaKnown RBP13.34□□□□□ -0.27
LINC02239-201ENST00000504339 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
LINC02239-201ENST00000504339 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
LINC02239-201ENST00000504339 TCOF1Q13428 1488 aaKnown RBP13.29□□□□□ -0.28
LINC02239-201ENST00000504339 HFM1A2PYH4 1435 aa13.29□□□□□ -0.28
LINC02239-201ENST00000504339 PLB1Q6P1J6 1458 aa13.28□□□□□ -0.28
LINC02239-201ENST00000504339 RAPGEF6Q8TEU7 1601 aa13.28□□□□□ -0.28
LINC02239-201ENST00000504339 NAIPQ13075 1403 aa13.27□□□□□ -0.28
LINC02239-201ENST00000504339 SIN3AQ96ST3 1273 aa13.26□□□□□ -0.29
LINC02239-201ENST00000504339 SCAF1Q9H7N4 1312 aaKnown RBP13.25□□□□□ -0.29
LINC02239-201ENST00000504339 MIA2Q96PC5 1412 aa13.24□□□□□ -0.29
LINC02239-201ENST00000504339 PRG4Q92954 1404 aaPredicted RBP13.23□□□□□ -0.29
LINC02239-201ENST00000504339 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
LINC02239-201ENST00000504339 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
LINC02239-201ENST00000504339 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
LINC02239-201ENST00000504339 RRP7BPQ9NSQ0 103 aa13.2□□□□□ -0.3
LINC02239-201ENST00000504339 TROQ12816 1431 aaPredicted RBP13.19□□□□□ -0.3
LINC02239-201ENST00000504339 UACAQ9BZF9 1416 aa13.19□□□□□ -0.3
LINC02239-201ENST00000504339 ABCA8O94911 1581 aa13.19□□□□□ -0.3
LINC02239-201ENST00000504339 NEUROD1Q13562 356 aa13.19□□□□□ -0.3
LINC02239-201ENST00000504339 PHF23Q9BUL5 403 aaPredicted RBP13.19□□□□□ -0.3
LINC02239-201ENST00000504339 MIER1Q8N108 512 aa13.18□□□□□ -0.3
LINC02239-201ENST00000504339 DENND4BO75064 1496 aaPredicted RBP13.17□□□□□ -0.3
LINC02239-201ENST00000504339 CDK11AQ9UQ88 783 aaPredicted RBP13.17□□□□□ -0.3
LINC02239-201ENST00000504339 KDM6BO15054 1643 aa13.17□□□□□ -0.3
LINC02239-201ENST00000504339 ABCC5O15440 1437 aa13.16□□□□□ -0.3
LINC02239-201ENST00000504339 ATP10BO94823 1461 aa13.16□□□□□ -0.3
LINC02239-201ENST00000504339 AKNAQ7Z591 1439 aa13.16□□□□□ -0.3
LINC02239-201ENST00000504339 KIF14Q15058 1648 aa13.15□□□□□ -0.3
LINC02239-201ENST00000504339 GPATCH8Q9UKJ3 1502 aaKnown RBP13.15□□□□□ -0.3
LINC02239-201ENST00000504339 DAPK1P53355 1430 aa13.14□□□□□ -0.31
LINC02239-201ENST00000504339 CHD1O14646 1710 aa13.14□□□□□ -0.31
LINC02239-201ENST00000504339 GCC2Q8IWJ2 1684 aa13.12□□□□□ -0.31
LINC02239-201ENST00000504339 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
LINC02239-201ENST00000504339 PTPRGP23470 1445 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms