RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 PPARGC1BQ86YN6 1023 aaKnown RBP16■□□□□ 0.15
CDK7-203ENST00000504147 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
CDK7-203ENST00000504147 VPS8Q8N3P4 1428 aa15.98■□□□□ 0.15
CDK7-203ENST00000504147 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
CDK7-203ENST00000504147 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
CDK7-203ENST00000504147 ARAP1Q96P48 1450 aa15.94■□□□□ 0.14
CDK7-203ENST00000504147 ARHGAP35Q9NRY4 1499 aa15.93■□□□□ 0.14
CDK7-203ENST00000504147 APLP2Q06481 763 aa15.9■□□□□ 0.14
CDK7-203ENST00000504147 PBRM1Q86U86 1689 aa15.87■□□□□ 0.13
CDK7-203ENST00000504147 ADAMTS12P58397 1594 aa15.86■□□□□ 0.13
CDK7-203ENST00000504147 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
CDK7-203ENST00000504147 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
CDK7-203ENST00000504147 P3H3Q8IVL6 736 aa15.84■□□□□ 0.13
CDK7-203ENST00000504147 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
CDK7-203ENST00000504147 MAGI1Q96QZ7 1491 aaPredicted RBP15.8■□□□□ 0.12
CDK7-203ENST00000504147 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
CDK7-203ENST00000504147 EFCAB5A4FU69 1503 aa15.79■□□□□ 0.12
CDK7-203ENST00000504147 CTTNBP2Q8WZ74 1663 aa15.78■□□□□ 0.12
CDK7-203ENST00000504147 FHOD3Q2V2M9 1422 aa15.77■□□□□ 0.12
CDK7-203ENST00000504147 SYNJ2O15056 1496 aa15.76■□□□□ 0.11
CDK7-203ENST00000504147 GRIN2AQ12879 1464 aa15.76■□□□□ 0.11
CDK7-203ENST00000504147 FBLN2P98095 1184 aa15.75■□□□□ 0.11
CDK7-203ENST00000504147 KANK4Q5T7N3 995 aaPredicted RBP15.73■□□□□ 0.11
CDK7-203ENST00000504147 KIAA0586Q9BVV6 1533 aa15.73■□□□□ 0.11
CDK7-203ENST00000504147 IQGAP2Q13576 1575 aa15.7■□□□□ 0.1
CDK7-203ENST00000504147 FMN1Q68DA7 1419 aa15.7■□□□□ 0.1
CDK7-203ENST00000504147 ATP1B4Q9UN42 357 aaPredicted RBP15.7■□□□□ 0.1
CDK7-203ENST00000504147 SAMD9Q5K651 1589 aa15.7■□□□□ 0.1
CDK7-203ENST00000504147 CASKIN1Q8WXD9 1431 aa15.68■□□□□ 0.1
CDK7-203ENST00000504147 MAP3K1Q13233 1512 aa15.67■□□□□ 0.1
CDK7-203ENST00000504147 UGGT2Q9NYU1 1516 aa15.67■□□□□ 0.1
CDK7-203ENST00000504147 NUP160Q12769 1436 aa15.66■□□□□ 0.1
CDK7-203ENST00000504147 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
CDK7-203ENST00000504147 HRCP23327 699 aa15.64■□□□□ 0.09
CDK7-203ENST00000504147 PCF11O94913 1555 aaKnown RBP15.62■□□□□ 0.09
CDK7-203ENST00000504147 CEP170Q5SW79 1584 aa15.62■□□□□ 0.09
CDK7-203ENST00000504147 JPH4Q96JJ6 628 aa15.62■□□□□ 0.09
CDK7-203ENST00000504147 TIAM1Q13009 1591 aa15.62■□□□□ 0.09
CDK7-203ENST00000504147 LRRC9Q6ZRR7 1453 aa15.59■□□□□ 0.09
CDK7-203ENST00000504147 DISP1Q96F81 1524 aa15.59■□□□□ 0.09
CDK7-203ENST00000504147 CARMIL2Q6F5E8 1435 aa15.55■□□□□ 0.08
CDK7-203ENST00000504147 KIAA0556O60303 1618 aa15.54■□□□□ 0.08
CDK7-203ENST00000504147 HNRNPUL2Q1KMD3 747 aaKnown RBP15.53■□□□□ 0.08
CDK7-203ENST00000504147 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
CDK7-203ENST00000504147 RRBP1Q9P2E9 1410 aaKnown RBP15.51■□□□□ 0.07
CDK7-203ENST00000504147 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
CDK7-203ENST00000504147 CCNB3Q8WWL7 1395 aa15.49■□□□□ 0.07
CDK7-203ENST00000504147 CCDC18Q5T9S5 1454 aa15.48■□□□□ 0.07
CDK7-203ENST00000504147 PRG4Q92954 1404 aaPredicted RBP15.47■□□□□ 0.07
CDK7-203ENST00000504147 PHLDB1Q86UU1 1377 aa15.47■□□□□ 0.07
CDK7-203ENST00000504147 HECW1Q76N89 1606 aa15.46■□□□□ 0.07
CDK7-203ENST00000504147 EPRSP07814 1512 aaKnown RBP15.46■□□□□ 0.07
CDK7-203ENST00000504147 ZEB1P37275 1124 aaPredicted RBP15.45■□□□□ 0.06
CDK7-203ENST00000504147 CHD1O14646 1710 aa15.45■□□□□ 0.06
CDK7-203ENST00000504147 ARID3CA6NKF2 412 aa15.44■□□□□ 0.06
CDK7-203ENST00000504147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
CDK7-203ENST00000504147 NUP153P49790 1475 aaKnown RBP15.41■□□□□ 0.06
CDK7-203ENST00000504147 CCER1Q8TC90 406 aaPredicted RBP15.41■□□□□ 0.06
CDK7-203ENST00000504147 PTPRGP23470 1445 aa15.41■□□□□ 0.06
CDK7-203ENST00000504147 PLB1Q6P1J6 1458 aa15.4■□□□□ 0.06
CDK7-203ENST00000504147 CDK11AQ9UQ88 783 aaPredicted RBP15.4■□□□□ 0.06
CDK7-203ENST00000504147 RAPGEF6Q8TEU7 1601 aa15.39■□□□□ 0.05
CDK7-203ENST00000504147 CDK13Q14004 1512 aaKnown RBP15.39■□□□□ 0.05
CDK7-203ENST00000504147 EHBP1L1Q8N3D4 1523 aa15.39■□□□□ 0.05
CDK7-203ENST00000504147 FAM50AQ14320 339 aaKnown RBP15.39■□□□□ 0.05
CDK7-203ENST00000504147 LRRIQ1Q96JM4 1722 aa15.39■□□□□ 0.05
CDK7-203ENST00000504147 NCOA2Q15596 1464 aa15.38■□□□□ 0.05
CDK7-203ENST00000504147 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
CDK7-203ENST00000504147 ITGAEP38570 1179 aa15.37■□□□□ 0.05
CDK7-203ENST00000504147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.36■□□□□ 0.05
CDK7-203ENST00000504147 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
CDK7-203ENST00000504147 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
CDK7-203ENST00000504147 FGD6Q6ZV73 1430 aa15.34■□□□□ 0.05
CDK7-203ENST00000504147 ABCA8O94911 1581 aa15.34■□□□□ 0.05
CDK7-203ENST00000504147 MYOM3Q5VTT5 1437 aa15.34■□□□□ 0.05
CDK7-203ENST00000504147 ARHGEF11O15085 1522 aa15.33■□□□□ 0.04
CDK7-203ENST00000504147 SUPT6HQ7KZ85 1726 aaKnown RBP15.31■□□□□ 0.04
CDK7-203ENST00000504147 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
CDK7-203ENST00000504147 PLEKHD1A6NEE1 506 aa15.3■□□□□ 0.04
CDK7-203ENST00000504147 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
CDK7-203ENST00000504147 UACAQ9BZF9 1416 aa15.3■□□□□ 0.04
CDK7-203ENST00000504147 ATP10BO94823 1461 aa15.29■□□□□ 0.04
CDK7-203ENST00000504147 TROQ12816 1431 aaPredicted RBP15.29■□□□□ 0.04
CDK7-203ENST00000504147 ERCC6L2Q5T890 1561 aa15.28■□□□□ 0.04
CDK7-203ENST00000504147 MIA2Q96PC5 1412 aa15.25■□□□□ 0.03
CDK7-203ENST00000504147 TCOF1Q13428 1488 aaKnown RBP15.23■□□□□ 0.03
CDK7-203ENST00000504147 SETD5Q9C0A6 1442 aa15.23■□□□□ 0.03
CDK7-203ENST00000504147 RAB3GAP2Q9H2M9 1393 aa15.2■□□□□ 0.02
CDK7-203ENST00000504147 PTPN23Q9H3S7 1636 aa15.2■□□□□ 0.02
CDK7-203ENST00000504147 PTPRKQ15262 1439 aa15.19■□□□□ 0.02
CDK7-203ENST00000504147 ABCC2Q92887 1545 aa15.19■□□□□ 0.02
CDK7-203ENST00000504147 UHRF1BP1LA0JNW5 1464 aa15.19■□□□□ 0.02
CDK7-203ENST00000504147 CFDP1Q9UEE9 299 aaPredicted RBP15.18■□□□□ 0.02
CDK7-203ENST00000504147 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
CDK7-203ENST00000504147 GPATCH8Q9UKJ3 1502 aaKnown RBP15.17■□□□□ 0.02
CDK7-203ENST00000504147 ZNF644Q9H582 1327 aaPredicted RBP15.16■□□□□ 0.02
CDK7-203ENST00000504147 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
CDK7-203ENST00000504147 ABCC10Q5T3U5 1492 aa15.14■□□□□ 0.01
CDK7-203ENST00000504147 ADCY10Q96PN6 1610 aa15.14■□□□□ 0.01
CDK7-203ENST00000504147 KIF14Q15058 1648 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms