RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 MAGI1Q96QZ7 1491 aaPredicted RBP24.24■■□□□ 1.47
SGCA-204ENST00000504073 TNIKQ9UKE5 1360 aa24.21■■□□□ 1.47
SGCA-204ENST00000504073 CHD1O14646 1710 aa24.19■■□□□ 1.46
SGCA-204ENST00000504073 ADAMTS12P58397 1594 aa24.19■■□□□ 1.46
SGCA-204ENST00000504073 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
SGCA-204ENST00000504073 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
SGCA-204ENST00000504073 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
SGCA-204ENST00000504073 FBLN2P98095 1184 aa24.07■■□□□ 1.44
SGCA-204ENST00000504073 GRIN2AQ12879 1464 aa24.03■■□□□ 1.44
SGCA-204ENST00000504073 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
SGCA-204ENST00000504073 CEP162Q5TB80 1403 aa24■■□□□ 1.43
SGCA-204ENST00000504073 CLIP1P30622 1438 aa23.94■■□□□ 1.42
SGCA-204ENST00000504073 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.41
SGCA-204ENST00000504073 IQGAP2Q13576 1575 aa23.87■■□□□ 1.41
SGCA-204ENST00000504073 CLASP1Q7Z460 1538 aa23.87■■□□□ 1.41
SGCA-204ENST00000504073 NUP160Q12769 1436 aa23.86■■□□□ 1.41
SGCA-204ENST00000504073 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
SGCA-204ENST00000504073 EFCAB5A4FU69 1503 aa23.84■■□□□ 1.41
SGCA-204ENST00000504073 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
SGCA-204ENST00000504073 UGGT2Q9NYU1 1516 aa23.74■■□□□ 1.39
SGCA-204ENST00000504073 ARHGAP35Q9NRY4 1499 aa23.74■■□□□ 1.39
SGCA-204ENST00000504073 CARMIL2Q6F5E8 1435 aa23.71■■□□□ 1.39
SGCA-204ENST00000504073 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
SGCA-204ENST00000504073 VPS8Q8N3P4 1428 aa23.68■■□□□ 1.38
SGCA-204ENST00000504073 JPH4Q96JJ6 628 aa23.68■■□□□ 1.38
SGCA-204ENST00000504073 FMN1Q68DA7 1419 aa23.65■■□□□ 1.38
SGCA-204ENST00000504073 APLP2Q06481 763 aa23.63■■□□□ 1.37
SGCA-204ENST00000504073 P3H3Q8IVL6 736 aa23.61■■□□□ 1.37
SGCA-204ENST00000504073 KIAA0556O60303 1618 aa23.6■■□□□ 1.37
SGCA-204ENST00000504073 FHOD3Q2V2M9 1422 aa23.59■■□□□ 1.37
SGCA-204ENST00000504073 SHROOM2Q13796 1616 aa23.57■■□□□ 1.36
SGCA-204ENST00000504073 DISP1Q96F81 1524 aa23.55■■□□□ 1.36
SGCA-204ENST00000504073 PRG4Q92954 1404 aaPredicted RBP23.55■■□□□ 1.36
SGCA-204ENST00000504073 ERCC6L2Q5T890 1561 aa23.5■■□□□ 1.35
SGCA-204ENST00000504073 FYCO1Q9BQS8 1478 aa23.49■■□□□ 1.35
SGCA-204ENST00000504073 CASKIN1Q8WXD9 1431 aa23.48■■□□□ 1.35
SGCA-204ENST00000504073 ILDR1Q86SU0 546 aaPredicted RBP23.46■■□□□ 1.35
SGCA-204ENST00000504073 ATP1B4Q9UN42 357 aaPredicted RBP23.44■■□□□ 1.34
SGCA-204ENST00000504073 PCF11O94913 1555 aaKnown RBP23.42■■□□□ 1.34
SGCA-204ENST00000504073 PTPRGP23470 1445 aa23.42■■□□□ 1.34
SGCA-204ENST00000504073 HECW1Q76N89 1606 aa23.41■■□□□ 1.34
SGCA-204ENST00000504073 KIF13AQ9H1H9 1805 aa23.41■■□□□ 1.34
SGCA-204ENST00000504073 TTBK1Q5TCY1 1321 aaPredicted RBP23.39■■□□□ 1.34
SGCA-204ENST00000504073 MAP3K1Q13233 1512 aa23.38■■□□□ 1.33
SGCA-204ENST00000504073 CCDC18Q5T9S5 1454 aa23.37■■□□□ 1.33
SGCA-204ENST00000504073 RAPGEF6Q8TEU7 1601 aa23.36■■□□□ 1.33
SGCA-204ENST00000504073 TIAM1Q13009 1591 aa23.3■■□□□ 1.32
SGCA-204ENST00000504073 CFAP43Q8NDM7 1665 aa23.28■■□□□ 1.32
SGCA-204ENST00000504073 KDM4FA0A1W2PPD8 638 aa23.28■■□□□ 1.32
SGCA-204ENST00000504073 CDK11AQ9UQ88 783 aaPredicted RBP23.28■■□□□ 1.32
SGCA-204ENST00000504073 ABCA8O94911 1581 aa23.27■■□□□ 1.32
SGCA-204ENST00000504073 UACAQ9BZF9 1416 aa23.27■■□□□ 1.32
SGCA-204ENST00000504073 PLB1Q6P1J6 1458 aa23.25■■□□□ 1.31
SGCA-204ENST00000504073 EPRSP07814 1512 aaKnown RBP23.25■■□□□ 1.31
SGCA-204ENST00000504073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.23■■□□□ 1.31
SGCA-204ENST00000504073 HNRNPUL2Q1KMD3 747 aaKnown RBP23.23■■□□□ 1.31
SGCA-204ENST00000504073 NUP153P49790 1475 aaKnown RBP23.22■■□□□ 1.31
SGCA-204ENST00000504073 ABCC2Q92887 1545 aa23.2■■□□□ 1.3
SGCA-204ENST00000504073 MTUS2Q5JR59 1369 aa23.2■■□□□ 1.3
SGCA-204ENST00000504073 UHRF1BP1LA0JNW5 1464 aa23.19■■□□□ 1.3
SGCA-204ENST00000504073 LRRC9Q6ZRR7 1453 aa23.19■■□□□ 1.3
SGCA-204ENST00000504073 FAM69CQ0P6D2 419 aa23.18■■□□□ 1.3
SGCA-204ENST00000504073 PPARGC1BQ86YN6 1023 aaKnown RBP23.17■■□□□ 1.3
SGCA-204ENST00000504073 EHBP1L1Q8N3D4 1523 aa23.16■■□□□ 1.3
SGCA-204ENST00000504073 LRRIQ1Q96JM4 1722 aa23.14■■□□□ 1.3
SGCA-204ENST00000504073 ABCC10Q5T3U5 1492 aa23.14■■□□□ 1.29
SGCA-204ENST00000504073 CDK13Q14004 1512 aaKnown RBP23.13■■□□□ 1.29
SGCA-204ENST00000504073 TRIM26Q12899 539 aaPredicted RBP23.12■■□□□ 1.29
SGCA-204ENST00000504073 KANK4Q5T7N3 995 aaPredicted RBP23.12■■□□□ 1.29
SGCA-204ENST00000504073 PLEKHD1A6NEE1 506 aa23.11■■□□□ 1.29
SGCA-204ENST00000504073 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
SGCA-204ENST00000504073 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
SGCA-204ENST00000504073 KDM6BO15054 1643 aa23.1■■□□□ 1.29
SGCA-204ENST00000504073 ATP10BO94823 1461 aa23.09■■□□□ 1.29
SGCA-204ENST00000504073 DIP2BQ9P265 1576 aa23.08■■□□□ 1.29
SGCA-204ENST00000504073 SUPT6HQ7KZ85 1726 aaKnown RBP23.08■■□□□ 1.28
SGCA-204ENST00000504073 KDM5BQ9UGL1 1544 aa23.05■■□□□ 1.28
SGCA-204ENST00000504073 TROQ12816 1431 aaPredicted RBP23.05■■□□□ 1.28
SGCA-204ENST00000504073 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
SGCA-204ENST00000504073 ADCY10Q96PN6 1610 aa23.01■■□□□ 1.27
SGCA-204ENST00000504073 TSPOAP1O95153 1857 aa23■■□□□ 1.27
SGCA-204ENST00000504073 ZCCHC11Q5TAX3 1644 aaKnown RBP23■■□□□ 1.27
SGCA-204ENST00000504073 NCOA2Q15596 1464 aa22.98■■□□□ 1.27
SGCA-204ENST00000504073 KIF14Q15058 1648 aa22.97■■□□□ 1.27
SGCA-204ENST00000504073 MAGI3Q5TCQ9 1506 aa22.96■■□□□ 1.27
SGCA-204ENST00000504073 CCNB3Q8WWL7 1395 aa22.91■■□□□ 1.26
SGCA-204ENST00000504073 MYOM3Q5VTT5 1437 aa22.9■■□□□ 1.26
SGCA-204ENST00000504073 PCGF6Q9BYE7 350 aa22.89■■□□□ 1.25
SGCA-204ENST00000504073 RRBP1Q9P2E9 1410 aaKnown RBP22.89■■□□□ 1.25
SGCA-204ENST00000504073 ADGRL1O94910 1474 aa22.88■■□□□ 1.25
SGCA-204ENST00000504073 PHLDB1Q86UU1 1377 aa22.88■■□□□ 1.25
SGCA-204ENST00000504073 ITSN2Q9NZM3 1697 aa22.87■■□□□ 1.25
SGCA-204ENST00000504073 WDR7Q9Y4E6 1490 aa22.87■■□□□ 1.25
SGCA-204ENST00000504073 HECW2Q9P2P5 1572 aa22.85■■□□□ 1.25
SGCA-204ENST00000504073 MIA2Q96PC5 1412 aa22.85■■□□□ 1.25
SGCA-204ENST00000504073 FGD6Q6ZV73 1430 aa22.83■■□□□ 1.25
SGCA-204ENST00000504073 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
SGCA-204ENST00000504073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.82■■□□□ 1.24
SGCA-204ENST00000504073 KCNH8Q96L42 1107 aa22.81■■□□□ 1.24
SGCA-204ENST00000504073 FAM50AQ14320 339 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms