RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 PDS5BQ9NTI5 1447 aa5.75□□□□□ -1.49
ALYREF-201ENST00000504015 WDR97A6NE52 1622 aa5.75□□□□□ -1.49
ALYREF-201ENST00000504015 CCNB3Q8WWL7 1395 aa5.75□□□□□ -1.49
ALYREF-201ENST00000504015 POLA1P09884 1462 aaPredicted RBP5.75□□□□□ -1.49
ALYREF-201ENST00000504015 CENPBP07199 599 aaPredicted RBP5.74□□□□□ -1.49
ALYREF-201ENST00000504015 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.74□□□□□ -1.49
ALYREF-201ENST00000504015 FYCO1Q9BQS8 1478 aa5.74□□□□□ -1.49
ALYREF-201ENST00000504015 LRRC9Q6ZRR7 1453 aa5.73□□□□□ -1.49
ALYREF-201ENST00000504015 KANK4Q5T7N3 995 aaPredicted RBP5.73□□□□□ -1.49
ALYREF-201ENST00000504015 ABCA5Q8WWZ7 1642 aa5.73□□□□□ -1.49
ALYREF-201ENST00000504015 DHX57Q6P158 1386 aaKnown RBP5.72□□□□□ -1.49
ALYREF-201ENST00000504015 RANGAP1P46060 587 aaPredicted RBP5.72□□□□□ -1.49
ALYREF-201ENST00000504015 FMN1Q68DA7 1419 aa5.72□□□□□ -1.49
ALYREF-201ENST00000504015 CASKIN1Q8WXD9 1431 aa5.72□□□□□ -1.49
ALYREF-201ENST00000504015 THOC2Q8NI27 1593 aaKnown RBP5.72□□□□□ -1.49
ALYREF-201ENST00000504015 URB2Q14146 1524 aaKnown RBP5.71□□□□□ -1.5
ALYREF-201ENST00000504015 ILDR2Q71H61 639 aa5.71□□□□□ -1.5
ALYREF-201ENST00000504015 KIF21AQ7Z4S6 1674 aa5.71□□□□□ -1.5
ALYREF-201ENST00000504015 ACIN1Q9UKV3 1341 aaKnown RBP5.71□□□□□ -1.5
ALYREF-201ENST00000504015 RAD54L2Q9Y4B4 1467 aa5.71□□□□□ -1.5
ALYREF-201ENST00000504015 PELP1Q8IZL8 1130 aaKnown RBP5.7□□□□□ -1.5
ALYREF-201ENST00000504015 TIMELESSQ9UNS1 1208 aa5.7□□□□□ -1.5
ALYREF-201ENST00000504015 PCF11O94913 1555 aaKnown RBP5.7□□□□□ -1.5
ALYREF-201ENST00000504015 SAMD9Q5K651 1589 aa5.7□□□□□ -1.5
ALYREF-201ENST00000504015 GAPVD1Q14C86 1478 aa5.7□□□□□ -1.5
ALYREF-201ENST00000504015 NESP48681 1621 aa5.7□□□□□ -1.5
ALYREF-201ENST00000504015 SETD5Q9C0A6 1442 aa5.69□□□□□ -1.5
ALYREF-201ENST00000504015 TARBP1Q13395 1621 aaKnown RBP5.68□□□□□ -1.5
ALYREF-201ENST00000504015 SCAF1Q9H7N4 1312 aaKnown RBP5.67□□□□□ -1.5
ALYREF-201ENST00000504015 SNAPC4Q5SXM2 1469 aa5.66□□□□□ -1.5
ALYREF-201ENST00000504015 RAB3GAP2Q9H2M9 1393 aa5.66□□□□□ -1.5
ALYREF-201ENST00000504015 CCDC18Q5T9S5 1454 aa5.65□□□□□ -1.5
ALYREF-201ENST00000504015 PBRM1Q86U86 1689 aa5.65□□□□□ -1.51
ALYREF-201ENST00000504015 PHLDB1Q86UU1 1377 aa5.65□□□□□ -1.51
ALYREF-201ENST00000504015 SUPT6HQ7KZ85 1726 aaKnown RBP5.65□□□□□ -1.51
ALYREF-201ENST00000504015 FHOD3Q2V2M9 1422 aa5.65□□□□□ -1.51
ALYREF-201ENST00000504015 GRIN2BQ13224 1484 aa5.64□□□□□ -1.51
ALYREF-201ENST00000504015 EHBP1L1Q8N3D4 1523 aa5.64□□□□□ -1.51
ALYREF-201ENST00000504015 NEUROD1Q13562 356 aa5.64□□□□□ -1.51
ALYREF-201ENST00000504015 FGD6Q6ZV73 1430 aa5.64□□□□□ -1.51
ALYREF-201ENST00000504015 MRC2Q9UBG0 1479 aa5.64□□□□□ -1.51
ALYREF-201ENST00000504015 MAPKBP1O60336 1514 aa5.64□□□□□ -1.51
ALYREF-201ENST00000504015 MTUS2Q5JR59 1369 aa5.63□□□□□ -1.51
ALYREF-201ENST00000504015 TDRD9Q8NDG6 1382 aaKnown RBP5.63□□□□□ -1.51
ALYREF-201ENST00000504015 ADAMTS12P58397 1594 aa5.63□□□□□ -1.51
ALYREF-201ENST00000504015 IQGAP2Q13576 1575 aa5.63□□□□□ -1.51
ALYREF-201ENST00000504015 HECW1Q76N89 1606 aa5.63□□□□□ -1.51
ALYREF-201ENST00000504015 MIER1Q8N108 512 aa5.62□□□□□ -1.51
ALYREF-201ENST00000504015 MYOM3Q5VTT5 1437 aa5.62□□□□□ -1.51
ALYREF-201ENST00000504015 IFT140Q96RY7 1462 aa5.62□□□□□ -1.51
ALYREF-201ENST00000504015 ARHGEF11O15085 1522 aa5.62□□□□□ -1.51
ALYREF-201ENST00000504015 LRRIQ1Q96JM4 1722 aa5.62□□□□□ -1.51
ALYREF-201ENST00000504015 HFM1A2PYH4 1435 aa5.61□□□□□ -1.51
ALYREF-201ENST00000504015 RIMBP3CA6NJZ7 1639 aa5.61□□□□□ -1.51
ALYREF-201ENST00000504015 RIMBP3BA6NNM3 1639 aa5.61□□□□□ -1.51
ALYREF-201ENST00000504015 WDR62O43379 1518 aa5.61□□□□□ -1.51
ALYREF-201ENST00000504015 FAM50AQ14320 339 aaKnown RBP5.61□□□□□ -1.51
ALYREF-201ENST00000504015 AKNAQ7Z591 1439 aa5.61□□□□□ -1.51
ALYREF-201ENST00000504015 P3H3Q8IVL6 736 aa5.61□□□□□ -1.51
ALYREF-201ENST00000504015 UGGT2Q9NYU1 1516 aa5.61□□□□□ -1.51
ALYREF-201ENST00000504015 RIMBP3Q9UFD9 1639 aa5.61□□□□□ -1.51
ALYREF-201ENST00000504015 ERCC6L2Q5T890 1561 aa5.6□□□□□ -1.51
ALYREF-201ENST00000504015 TCOF1Q13428 1488 aaKnown RBP5.6□□□□□ -1.51
ALYREF-201ENST00000504015 NCOA2Q15596 1464 aa5.6□□□□□ -1.51
ALYREF-201ENST00000504015 MIA2Q96PC5 1412 aa5.6□□□□□ -1.51
ALYREF-201ENST00000504015 ITGAEP38570 1179 aa5.6□□□□□ -1.51
ALYREF-201ENST00000504015 ATP1B4Q9UN42 357 aaPredicted RBP5.6□□□□□ -1.51
ALYREF-201ENST00000504015 UACAQ9BZF9 1416 aa5.59□□□□□ -1.51
ALYREF-201ENST00000504015 FBXO41Q8TF61 875 aa5.59□□□□□ -1.51
ALYREF-201ENST00000504015 GTF3C3Q9Y5Q9 886 aa5.59□□□□□ -1.51
ALYREF-201ENST00000504015 PTPN23Q9H3S7 1636 aa5.59□□□□□ -1.52
ALYREF-201ENST00000504015 KIAA0586Q9BVV6 1533 aa5.58□□□□□ -1.52
ALYREF-201ENST00000504015 ERCC6Q03468 1493 aa5.58□□□□□ -1.52
ALYREF-201ENST00000504015 EPRSP07814 1512 aaKnown RBP5.58□□□□□ -1.52
ALYREF-201ENST00000504015 GCC2Q8IWJ2 1684 aa5.57□□□□□ -1.52
ALYREF-201ENST00000504015 PPP1R15AO75807 674 aaPredicted RBP5.57□□□□□ -1.52
ALYREF-201ENST00000504015 TRHP20396 242 aaPredicted RBP5.57□□□□□ -1.52
ALYREF-201ENST00000504015 MAGI1Q96QZ7 1491 aaPredicted RBP5.57□□□□□ -1.52
ALYREF-201ENST00000504015 NAIPQ13075 1403 aa5.57□□□□□ -1.52
ALYREF-201ENST00000504015 KIAA0556O60303 1618 aa5.56□□□□□ -1.52
ALYREF-201ENST00000504015 MAGI3Q5TCQ9 1506 aa5.55□□□□□ -1.52
ALYREF-201ENST00000504015 CDK11AQ9UQ88 783 aaPredicted RBP5.55□□□□□ -1.52
ALYREF-201ENST00000504015 GRIN2AQ12879 1464 aa5.55□□□□□ -1.52
ALYREF-201ENST00000504015 EIF4G3O43432 1585 aaKnown RBP5.55□□□□□ -1.52
ALYREF-201ENST00000504015 ROCK1Q13464 1354 aa5.55□□□□□ -1.52
ALYREF-201ENST00000504015 TONSLQ96HA7 1378 aa5.55□□□□□ -1.52
ALYREF-201ENST00000504015 DISP3Q9P2K9 1392 aa5.55□□□□□ -1.52
ALYREF-201ENST00000504015 RAPGEF6Q8TEU7 1601 aa5.54□□□□□ -1.52
ALYREF-201ENST00000504015 PTPRKQ15262 1439 aa5.54□□□□□ -1.52
ALYREF-201ENST00000504015 DISP1Q96F81 1524 aa5.53□□□□□ -1.52
ALYREF-201ENST00000504015 SYNJ2O15056 1496 aa5.53□□□□□ -1.52
ALYREF-201ENST00000504015 SIN3AQ96ST3 1273 aa5.53□□□□□ -1.52
ALYREF-201ENST00000504015 ITSN2Q9NZM3 1697 aa5.53□□□□□ -1.52
ALYREF-201ENST00000504015 DNMT1P26358 1616 aaKnown RBP5.52□□□□□ -1.53
ALYREF-201ENST00000504015 ADCY10Q96PN6 1610 aa5.52□□□□□ -1.53
ALYREF-201ENST00000504015 CARMIL2Q6F5E8 1435 aa5.52□□□□□ -1.53
ALYREF-201ENST00000504015 CCER2I3L3R5 266 aa5.52□□□□□ -1.53
ALYREF-201ENST00000504015 YTHDC1Q96MU7 727 aaKnown RBP5.52□□□□□ -1.53
ALYREF-201ENST00000504015 ZNF608Q9ULD9 1512 aaPredicted RBP5.52□□□□□ -1.53
ALYREF-201ENST00000504015 SPATA31D1Q6ZQQ2 1576 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms