RNA–Protein interactions for RNA: ENST00000503823.5

SLIT2-202, Transcript of slit guidance ligand 2, humanhuman

TSL 1 (best) BASIC

Gene SLIT2, Length 5,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-202ENST00000503823 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
SLIT2-202ENST00000503823 MLECQ14165 292 aa17.1■□□□□ 0.33
SLIT2-202ENST00000503823 CARMIL2Q6F5E8 1435 aa17.1■□□□□ 0.33
SLIT2-202ENST00000503823 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
SLIT2-202ENST00000503823 C14orf37Q86TY3 774 aa17.07■□□□□ 0.32
SLIT2-202ENST00000503823 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
SLIT2-202ENST00000503823 RRP7BPQ9NSQ0 103 aa17.03■□□□□ 0.32
SLIT2-202ENST00000503823 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.31
SLIT2-202ENST00000503823 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
SLIT2-202ENST00000503823 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
SLIT2-202ENST00000503823 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
SLIT2-202ENST00000503823 PLEKHG5O94827 1062 aa16.96■□□□□ 0.31
SLIT2-202ENST00000503823 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
SLIT2-202ENST00000503823 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
SLIT2-202ENST00000503823 CCNB3Q8WWL7 1395 aa16.92■□□□□ 0.3
SLIT2-202ENST00000503823 NEFMP07197 916 aa16.92■□□□□ 0.3
SLIT2-202ENST00000503823 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
SLIT2-202ENST00000503823 DIEXFQ68CQ4 756 aaKnown RBP16.91■□□□□ 0.3
SLIT2-202ENST00000503823 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
SLIT2-202ENST00000503823 TONSLQ96HA7 1378 aa16.87■□□□□ 0.29
SLIT2-202ENST00000503823 NESP48681 1621 aa16.86■□□□□ 0.29
SLIT2-202ENST00000503823 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
SLIT2-202ENST00000503823 TNIKQ9UKE5 1360 aa16.85■□□□□ 0.29
SLIT2-202ENST00000503823 GGT6Q6P531 493 aa16.84■□□□□ 0.29
SLIT2-202ENST00000503823 FHAD1B1AJZ9 1412 aa16.84■□□□□ 0.29
SLIT2-202ENST00000503823 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.29
SLIT2-202ENST00000503823 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.29
SLIT2-202ENST00000503823 RGL3Q3MIN7 710 aa16.83■□□□□ 0.28
SLIT2-202ENST00000503823 A0A0G2JS52 829 aa16.82■□□□□ 0.28
SLIT2-202ENST00000503823 RTL5Q5HYW3 569 aaPredicted RBP16.82■□□□□ 0.28
SLIT2-202ENST00000503823 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
SLIT2-202ENST00000503823 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.28
SLIT2-202ENST00000503823 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
SLIT2-202ENST00000503823 PTPRGP23470 1445 aa16.77■□□□□ 0.28
SLIT2-202ENST00000503823 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.27
SLIT2-202ENST00000503823 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
SLIT2-202ENST00000503823 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
SLIT2-202ENST00000503823 RAPGEF2Q9Y4G8 1499 aa16.76■□□□□ 0.27
SLIT2-202ENST00000503823 FAM69CQ0P6D2 419 aa16.75■□□□□ 0.27
SLIT2-202ENST00000503823 KANK1Q14678 1352 aa16.74■□□□□ 0.27
SLIT2-202ENST00000503823 ANP32CO43423 234 aa16.73■□□□□ 0.27
SLIT2-202ENST00000503823 HDGFP51858 240 aaKnown RBP16.7■□□□□ 0.26
SLIT2-202ENST00000503823 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
SLIT2-202ENST00000503823 FMN1Q68DA7 1419 aa16.68■□□□□ 0.26
SLIT2-202ENST00000503823 BCL11AQ9H165 835 aa16.65■□□□□ 0.26
SLIT2-202ENST00000503823 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
SLIT2-202ENST00000503823 FHOD3Q2V2M9 1422 aa16.65■□□□□ 0.26
SLIT2-202ENST00000503823 POGKQ9P215 609 aa16.64■□□□□ 0.25
SLIT2-202ENST00000503823 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
SLIT2-202ENST00000503823 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
SLIT2-202ENST00000503823 HNRNPMP52272 730 aaKnown RBP eCLIP16.62■□□□□ 0.25
SLIT2-202ENST00000503823 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
SLIT2-202ENST00000503823 ACIN1Q9UKV3 1341 aaKnown RBP16.61■□□□□ 0.25
SLIT2-202ENST00000503823 CFTRP13569 1480 aa16.61■□□□□ 0.25
SLIT2-202ENST00000503823 KIF3BO15066 747 aa16.6■□□□□ 0.25
SLIT2-202ENST00000503823 SPAG9O60271 1321 aaKnown RBP16.6■□□□□ 0.25
SLIT2-202ENST00000503823 GRIN2BQ13224 1484 aa16.6■□□□□ 0.25
SLIT2-202ENST00000503823 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
SLIT2-202ENST00000503823 CANXP27824 592 aaKnown RBP16.57■□□□□ 0.24
SLIT2-202ENST00000503823 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
SLIT2-202ENST00000503823 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
SLIT2-202ENST00000503823 IGF1RP08069 1367 aa16.53■□□□□ 0.24
SLIT2-202ENST00000503823 ARHGAP35Q9NRY4 1499 aa16.53■□□□□ 0.24
SLIT2-202ENST00000503823 EID1Q9Y6B2 187 aa16.5■□□□□ 0.23
SLIT2-202ENST00000503823 PRG4Q92954 1404 aaPredicted RBP16.5■□□□□ 0.23
SLIT2-202ENST00000503823 NPM2Q86SE8 214 aaKnown RBP16.49■□□□□ 0.23
SLIT2-202ENST00000503823 KANK4Q5T7N3 995 aaPredicted RBP16.49■□□□□ 0.23
SLIT2-202ENST00000503823 TOPBP1Q92547 1522 aa16.48■□□□□ 0.23
SLIT2-202ENST00000503823 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
SLIT2-202ENST00000503823 RUSC2Q8N2Y8 1516 aa16.46■□□□□ 0.23
SLIT2-202ENST00000503823 SAFB2Q14151 953 aaKnown RBP eCLIP16.46■□□□□ 0.23
SLIT2-202ENST00000503823 STK26Q9P289 416 aa16.46■□□□□ 0.23
SLIT2-202ENST00000503823 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
SLIT2-202ENST00000503823 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
SLIT2-202ENST00000503823 RSPH4AQ5TD94 716 aa16.45■□□□□ 0.22
SLIT2-202ENST00000503823 ANKRD30AQ9BXX3 1397 aa16.45■□□□□ 0.22
SLIT2-202ENST00000503823 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
SLIT2-202ENST00000503823 PPM1GO15355 546 aaPredicted RBP16.44■□□□□ 0.22
SLIT2-202ENST00000503823 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
SLIT2-202ENST00000503823 DCAF11Q8TEB1 546 aa16.42■□□□□ 0.22
SLIT2-202ENST00000503823 HIRIP3Q9BW71 556 aaPredicted RBP16.42■□□□□ 0.22
SLIT2-202ENST00000503823 EIF4G2P78344 907 aaKnown RBP eCLIP16.42■□□□□ 0.22
SLIT2-202ENST00000503823 PKD2Q13563 968 aa16.42■□□□□ 0.22
SLIT2-202ENST00000503823 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
SLIT2-202ENST00000503823 CDCA8Q53HL2 280 aa16.4■□□□□ 0.22
SLIT2-202ENST00000503823 NUTM2DQ5VT03 806 aaPredicted RBP16.4■□□□□ 0.22
SLIT2-202ENST00000503823 NUP155O75694 1391 aa16.4■□□□□ 0.22
SLIT2-202ENST00000503823 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
SLIT2-202ENST00000503823 WDR43Q15061 677 aaKnown RBP eCLIP16.39■□□□□ 0.21
SLIT2-202ENST00000503823 SRPK2P78362 688 aaKnown RBP16.37■□□□□ 0.21
SLIT2-202ENST00000503823 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
SLIT2-202ENST00000503823 SOX12O15370 315 aa16.36■□□□□ 0.21
SLIT2-202ENST00000503823 FOXD1Q16676 465 aa16.34■□□□□ 0.21
SLIT2-202ENST00000503823 ARXQ96QS3 562 aa16.34■□□□□ 0.21
SLIT2-202ENST00000503823 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.21
SLIT2-202ENST00000503823 PAK3O75914 559 aaPredicted RBP16.33■□□□□ 0.2
SLIT2-202ENST00000503823 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
SLIT2-202ENST00000503823 FAM9BQ8IZU0 186 aa16.31■□□□□ 0.2
SLIT2-202ENST00000503823 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
SLIT2-202ENST00000503823 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms