RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 RIMBP3BA6NNM3 1639 aa27.41■■□□□ 1.98
SCLT1-205ENST00000503401 RIMBP3Q9UFD9 1639 aa27.41■■□□□ 1.98
SCLT1-205ENST00000503401 KIAA0586Q9BVV6 1533 aa27.35■■□□□ 1.97
SCLT1-205ENST00000503401 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
SCLT1-205ENST00000503401 JPH4Q96JJ6 628 aa27.3■■□□□ 1.96
SCLT1-205ENST00000503401 ERCC6L2Q5T890 1561 aa27.3■■□□□ 1.96
SCLT1-205ENST00000503401 EHMT2Q96KQ7 1210 aa27.27■■□□□ 1.96
SCLT1-205ENST00000503401 CTTNBP2Q8WZ74 1663 aa27.26■■□□□ 1.96
SCLT1-205ENST00000503401 IQGAP2Q13576 1575 aa27.26■■□□□ 1.95
SCLT1-205ENST00000503401 KIF21BO75037 1637 aa27.26■■□□□ 1.95
SCLT1-205ENST00000503401 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
SCLT1-205ENST00000503401 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
SCLT1-205ENST00000503401 CYB5RLQ6IPT4 315 aa27.18■■□□□ 1.94
SCLT1-205ENST00000503401 GOLGA3Q08378 1498 aa27.12■■□□□ 1.93
SCLT1-205ENST00000503401 UGGT2Q9NYU1 1516 aa27.1■■□□□ 1.93
SCLT1-205ENST00000503401 UBTFP17480 764 aaKnown RBP27.08■■□□□ 1.93
SCLT1-205ENST00000503401 DISP1Q96F81 1524 aa27.06■■□□□ 1.92
SCLT1-205ENST00000503401 CARMIL2Q6F5E8 1435 aa27.04■■□□□ 1.92
SCLT1-205ENST00000503401 RANGAP1P46060 587 aaPredicted RBP27.03■■□□□ 1.92
SCLT1-205ENST00000503401 TTBK1Q5TCY1 1321 aaPredicted RBP27.02■■□□□ 1.92
SCLT1-205ENST00000503401 KIAA0556O60303 1618 aa27.01■■□□□ 1.91
SCLT1-205ENST00000503401 TNIKQ9UKE5 1360 aa26.95■■□□□ 1.9
SCLT1-205ENST00000503401 P3H3Q8IVL6 736 aa26.93■■□□□ 1.9
SCLT1-205ENST00000503401 PTPRGP23470 1445 aa26.92■■□□□ 1.9
SCLT1-205ENST00000503401 SAMD9Q5K651 1589 aa26.9■■□□□ 1.9
SCLT1-205ENST00000503401 LOC105371045A0A1W2PR82 267 aa26.84■■□□□ 1.89
SCLT1-205ENST00000503401 ADCY10Q96PN6 1610 aa26.82■■□□□ 1.88
SCLT1-205ENST00000503401 FHOD3Q2V2M9 1422 aa26.8■■□□□ 1.88
SCLT1-205ENST00000503401 EFCAB5A4FU69 1503 aa26.79■■□□□ 1.88
SCLT1-205ENST00000503401 UACAQ9BZF9 1416 aa26.75■■□□□ 1.87
SCLT1-205ENST00000503401 PLB1Q6P1J6 1458 aa26.75■■□□□ 1.87
SCLT1-205ENST00000503401 ARHGAP35Q9NRY4 1499 aa26.75■■□□□ 1.87
SCLT1-205ENST00000503401 ABCC2Q92887 1545 aa26.71■■□□□ 1.87
SCLT1-205ENST00000503401 ABCA8O94911 1581 aa26.68■■□□□ 1.86
SCLT1-205ENST00000503401 UHRF1BP1LA0JNW5 1464 aa26.68■■□□□ 1.86
SCLT1-205ENST00000503401 CLIP1P30622 1438 aa26.66■■□□□ 1.86
SCLT1-205ENST00000503401 NPM1P06748 294 aaKnown RBP eCLIP26.65■■□□□ 1.86
SCLT1-205ENST00000503401 RAPGEF6Q8TEU7 1601 aa26.61■■□□□ 1.85
SCLT1-205ENST00000503401 CEP162Q5TB80 1403 aa26.61■■□□□ 1.85
SCLT1-205ENST00000503401 ARID3CA6NKF2 412 aa26.59■■□□□ 1.85
SCLT1-205ENST00000503401 ZCCHC11Q5TAX3 1644 aaKnown RBP26.58■■□□□ 1.85
SCLT1-205ENST00000503401 KDM5BQ9UGL1 1544 aa26.57■■□□□ 1.84
SCLT1-205ENST00000503401 TRHP20396 242 aaPredicted RBP26.55■■□□□ 1.84
SCLT1-205ENST00000503401 MAPKBP1O60336 1514 aa26.54■■□□□ 1.84
SCLT1-205ENST00000503401 FMN1Q68DA7 1419 aa26.54■■□□□ 1.84
SCLT1-205ENST00000503401 NUP153P49790 1475 aaKnown RBP26.51■■□□□ 1.83
SCLT1-205ENST00000503401 ASXL2Q76L83 1435 aa26.48■■□□□ 1.83
SCLT1-205ENST00000503401 ATP10BO94823 1461 aa26.48■■□□□ 1.83
SCLT1-205ENST00000503401 ATP1B4Q9UN42 357 aaPredicted RBP26.47■■□□□ 1.83
SCLT1-205ENST00000503401 PCF11O94913 1555 aaKnown RBP26.44■■□□□ 1.82
SCLT1-205ENST00000503401 KIF13AQ9H1H9 1805 aa26.43■■□□□ 1.82
SCLT1-205ENST00000503401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.43■■□□□ 1.82
SCLT1-205ENST00000503401 HNRNPUL2Q1KMD3 747 aaKnown RBP26.43■■□□□ 1.82
SCLT1-205ENST00000503401 HECW1Q76N89 1606 aa26.42■■□□□ 1.82
SCLT1-205ENST00000503401 ABCC10Q5T3U5 1492 aa26.4■■□□□ 1.82
SCLT1-205ENST00000503401 DIP2BQ9P265 1576 aa26.4■■□□□ 1.82
SCLT1-205ENST00000503401 CDK13Q14004 1512 aaKnown RBP26.39■■□□□ 1.82
SCLT1-205ENST00000503401 LRRIQ1Q96JM4 1722 aa26.38■■□□□ 1.81
SCLT1-205ENST00000503401 CASKIN1Q8WXD9 1431 aa26.38■■□□□ 1.81
SCLT1-205ENST00000503401 FAM69CQ0P6D2 419 aa26.37■■□□□ 1.81
SCLT1-205ENST00000503401 WDR7Q9Y4E6 1490 aa26.37■■□□□ 1.81
SCLT1-205ENST00000503401 EPRSP07814 1512 aaKnown RBP26.35■■□□□ 1.81
SCLT1-205ENST00000503401 KCNH8Q96L42 1107 aa26.32■■□□□ 1.8
SCLT1-205ENST00000503401 FYCO1Q9BQS8 1478 aa26.32■■□□□ 1.8
SCLT1-205ENST00000503401 TSPOAP1O95153 1857 aa26.27■■□□□ 1.8
SCLT1-205ENST00000503401 PLEKHD1A6NEE1 506 aa26.25■■□□□ 1.79
SCLT1-205ENST00000503401 GLI2P10070 1586 aa26.25■■□□□ 1.79
SCLT1-205ENST00000503401 VPS8Q8N3P4 1428 aa26.24■■□□□ 1.79
SCLT1-205ENST00000503401 CCDC18Q5T9S5 1454 aa26.23■■□□□ 1.79
SCLT1-205ENST00000503401 MAP3K4Q9Y6R4 1608 aa26.18■■□□□ 1.78
SCLT1-205ENST00000503401 CDK11AQ9UQ88 783 aaPredicted RBP26.17■■□□□ 1.78
SCLT1-205ENST00000503401 MAGI3Q5TCQ9 1506 aa26.15■■□□□ 1.78
SCLT1-205ENST00000503401 PPRC1Q5VV67 1664 aaKnown RBP26.14■■□□□ 1.78
SCLT1-205ENST00000503401 CFAP43Q8NDM7 1665 aa26.14■■□□□ 1.77
SCLT1-205ENST00000503401 ABCA9Q8IUA7 1624 aa26.12■■□□□ 1.77
SCLT1-205ENST00000503401 TROQ12816 1431 aaPredicted RBP26.12■■□□□ 1.77
SCLT1-205ENST00000503401 KIF14Q15058 1648 aa26.11■■□□□ 1.77
SCLT1-205ENST00000503401 CD109Q6YHK3 1445 aa26.11■■□□□ 1.77
SCLT1-205ENST00000503401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.777e-7■■□□□ 14.3
SCLT1-205ENST00000503401 TTC37Q6PGP7 1564 aa26.09■■□□□ 1.77
SCLT1-205ENST00000503401 TIAM1Q13009 1591 aa26.04■■□□□ 1.76
SCLT1-205ENST00000503401 MTUS2Q5JR59 1369 aa26.02■■□□□ 1.76
SCLT1-205ENST00000503401 TEX14Q8IWB6 1497 aa26■■□□□ 1.75
SCLT1-205ENST00000503401 EHBP1L1Q8N3D4 1523 aa25.96■■□□□ 1.75
SCLT1-205ENST00000503401 MYO5CQ9NQX4 1742 aa25.95■■□□□ 1.75
SCLT1-205ENST00000503401 MAP3K1Q13233 1512 aa25.94■■□□□ 1.74
SCLT1-205ENST00000503401 APLP2Q06481 763 aa25.93■■□□□ 1.74
SCLT1-205ENST00000503401 KANK4Q5T7N3 995 aaPredicted RBP25.93■■□□□ 1.74
SCLT1-205ENST00000503401 LRRC9Q6ZRR7 1453 aa25.92■■□□□ 1.74
SCLT1-205ENST00000503401 KDM6BO15054 1643 aa25.92■■□□□ 1.74
SCLT1-205ENST00000503401 PLCH2O75038 1416 aa25.9■■□□□ 1.74
SCLT1-205ENST00000503401 CDC42BPAQ5VT25 1732 aa25.89■■□□□ 1.73
SCLT1-205ENST00000503401 FANCAO15360 1455 aa25.88■■□□□ 1.73
SCLT1-205ENST00000503401 COL17A1Q9UMD9 1497 aaPredicted RBP25.88■■□□□ 1.73
SCLT1-205ENST00000503401 CDC42BPBQ9Y5S2 1711 aa25.88■■□□□ 1.73
SCLT1-205ENST00000503401 SUPT6HQ7KZ85 1726 aaKnown RBP25.87■■□□□ 1.73
SCLT1-205ENST00000503401 PREX2Q70Z35 1606 aa25.86■■□□□ 1.73
SCLT1-205ENST00000503401 ARHGAP5Q13017 1502 aa25.85■■□□□ 1.73
SCLT1-205ENST00000503401 NEO1Q92859 1461 aa25.85■■□□□ 1.73
SCLT1-205ENST00000503401 NCOA2Q15596 1464 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms