RNA–Protein interactions for RNA: ENST00000503337.1

ABCC3-205, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 1 (best)

Gene ABCC3, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-205ENST00000503337 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
ABCC3-205ENST00000503337 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
ABCC3-205ENST00000503337 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
ABCC3-205ENST00000503337 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
ABCC3-205ENST00000503337 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
ABCC3-205ENST00000503337 CENPBP07199 599 aaPredicted RBP20.52■□□□□ 0.88
ABCC3-205ENST00000503337 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
ABCC3-205ENST00000503337 TIAM1Q13009 1591 aa20.47■□□□□ 0.87
ABCC3-205ENST00000503337 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
ABCC3-205ENST00000503337 CCNB3Q8WWL7 1395 aa20.45■□□□□ 0.86
ABCC3-205ENST00000503337 DHX57Q6P158 1386 aaKnown RBP20.44■□□□□ 0.86
ABCC3-205ENST00000503337 TDRD9Q8NDG6 1382 aaKnown RBP20.44■□□□□ 0.86
ABCC3-205ENST00000503337 ABCA5Q8WWZ7 1642 aa20.44■□□□□ 0.86
ABCC3-205ENST00000503337 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
ABCC3-205ENST00000503337 CUL7Q14999 1698 aa20.43■□□□□ 0.86
ABCC3-205ENST00000503337 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
ABCC3-205ENST00000503337 CFAP43Q8NDM7 1665 aa20.39■□□□□ 0.85
ABCC3-205ENST00000503337 ZNF608Q9ULD9 1512 aaPredicted RBP20.38■□□□□ 0.85
ABCC3-205ENST00000503337 EFCAB5A4FU69 1503 aa20.37■□□□□ 0.85
ABCC3-205ENST00000503337 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
ABCC3-205ENST00000503337 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.85
ABCC3-205ENST00000503337 LRRC9Q6ZRR7 1453 aa20.35■□□□□ 0.85
ABCC3-205ENST00000503337 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
ABCC3-205ENST00000503337 CTTNBP2Q8WZ74 1663 aa20.34■□□□□ 0.85
ABCC3-205ENST00000503337 EIF4G3O43432 1585 aaKnown RBP20.32■□□□□ 0.84
ABCC3-205ENST00000503337 PCF11O94913 1555 aaKnown RBP20.32■□□□□ 0.84
ABCC3-205ENST00000503337 FYCO1Q9BQS8 1478 aa20.29■□□□□ 0.84
ABCC3-205ENST00000503337 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
ABCC3-205ENST00000503337 CASKIN1Q8WXD9 1431 aa20.24■□□□□ 0.83
ABCC3-205ENST00000503337 FHOD3Q2V2M9 1422 aa20.21■□□□□ 0.83
ABCC3-205ENST00000503337 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
ABCC3-205ENST00000503337 MIER1Q8N108 512 aa20.2■□□□□ 0.82
ABCC3-205ENST00000503337 RAB3GAP2Q9H2M9 1393 aa20.2■□□□□ 0.82
ABCC3-205ENST00000503337 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
ABCC3-205ENST00000503337 SETD5Q9C0A6 1442 aa20.2■□□□□ 0.82
ABCC3-205ENST00000503337 PHLDB1Q86UU1 1377 aa20.19■□□□□ 0.82
ABCC3-205ENST00000503337 ITGAEP38570 1179 aa20.19■□□□□ 0.82
ABCC3-205ENST00000503337 SNAPC4Q5SXM2 1469 aa20.18■□□□□ 0.82
ABCC3-205ENST00000503337 GTF3C3Q9Y5Q9 886 aa20.17■□□□□ 0.82
ABCC3-205ENST00000503337 P3H3Q8IVL6 736 aa20.16■□□□□ 0.82
ABCC3-205ENST00000503337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.15■□□□□ 0.82
ABCC3-205ENST00000503337 SAMD9Q5K651 1589 aa20.13■□□□□ 0.81
ABCC3-205ENST00000503337 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
ABCC3-205ENST00000503337 MAGI1Q96QZ7 1491 aaPredicted RBP20.12■□□□□ 0.81
ABCC3-205ENST00000503337 MAPKBP1O60336 1514 aa20.11■□□□□ 0.81
ABCC3-205ENST00000503337 FAM50AQ14320 339 aaKnown RBP20.11■□□□□ 0.81
ABCC3-205ENST00000503337 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
ABCC3-205ENST00000503337 SYNJ2O15056 1496 aa20.05■□□□□ 0.8
ABCC3-205ENST00000503337 GRIN2AQ12879 1464 aa20.03■□□□□ 0.8
ABCC3-205ENST00000503337 FGD6Q6ZV73 1430 aa20.02■□□□□ 0.8
ABCC3-205ENST00000503337 MTUS2Q5JR59 1369 aa20.01■□□□□ 0.79
ABCC3-205ENST00000503337 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
ABCC3-205ENST00000503337 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
ABCC3-205ENST00000503337 FBLN2P98095 1184 aa19.99■□□□□ 0.79
ABCC3-205ENST00000503337 EHBP1L1Q8N3D4 1523 aa19.98■□□□□ 0.79
ABCC3-205ENST00000503337 SUPT6HQ7KZ85 1726 aaKnown RBP19.98■□□□□ 0.79
ABCC3-205ENST00000503337 LRRIQ1Q96JM4 1722 aa19.96■□□□□ 0.79
ABCC3-205ENST00000503337 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
ABCC3-205ENST00000503337 CHD1O14646 1710 aa19.94■□□□□ 0.78
ABCC3-205ENST00000503337 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
ABCC3-205ENST00000503337 MYOM3Q5VTT5 1437 aa19.92■□□□□ 0.78
ABCC3-205ENST00000503337 IQGAP2Q13576 1575 aa19.92■□□□□ 0.78
ABCC3-205ENST00000503337 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
ABCC3-205ENST00000503337 HECW1Q76N89 1606 aa19.92■□□□□ 0.78
ABCC3-205ENST00000503337 HFM1A2PYH4 1435 aa19.89■□□□□ 0.77
ABCC3-205ENST00000503337 NUP160Q12769 1436 aa19.88■□□□□ 0.77
ABCC3-205ENST00000503337 KIAA0586Q9BVV6 1533 aa19.88■□□□□ 0.77
ABCC3-205ENST00000503337 UGGT2Q9NYU1 1516 aa19.87■□□□□ 0.77
ABCC3-205ENST00000503337 PTPN23Q9H3S7 1636 aa19.87■□□□□ 0.77
ABCC3-205ENST00000503337 ARHGEF11O15085 1522 aa19.85■□□□□ 0.77
ABCC3-205ENST00000503337 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
ABCC3-205ENST00000503337 SIN3AQ96ST3 1273 aa19.83■□□□□ 0.77
ABCC3-205ENST00000503337 TCOF1Q13428 1488 aaKnown RBP19.8■□□□□ 0.76
ABCC3-205ENST00000503337 NAIPQ13075 1403 aa19.78■□□□□ 0.76
ABCC3-205ENST00000503337 PTPRKQ15262 1439 aa19.78■□□□□ 0.76
ABCC3-205ENST00000503337 MAGI3Q5TCQ9 1506 aa19.77■□□□□ 0.76
ABCC3-205ENST00000503337 EPRSP07814 1512 aaKnown RBP19.77■□□□□ 0.76
ABCC3-205ENST00000503337 PPP1R15AO75807 674 aaPredicted RBP19.77■□□□□ 0.75
ABCC3-205ENST00000503337 GCC2Q8IWJ2 1684 aa19.76■□□□□ 0.75
ABCC3-205ENST00000503337 TONSLQ96HA7 1378 aa19.76■□□□□ 0.75
ABCC3-205ENST00000503337 AKNAQ7Z591 1439 aa19.75■□□□□ 0.75
ABCC3-205ENST00000503337 MIA2Q96PC5 1412 aa19.73■□□□□ 0.75
ABCC3-205ENST00000503337 KIAA0556O60303 1618 aa19.73■□□□□ 0.75
ABCC3-205ENST00000503337 DISP1Q96F81 1524 aa19.72■□□□□ 0.75
ABCC3-205ENST00000503337 JPH4Q96JJ6 628 aa19.7■□□□□ 0.74
ABCC3-205ENST00000503337 CLASP1Q7Z460 1538 aa19.68■□□□□ 0.74
ABCC3-205ENST00000503337 CDK13Q14004 1512 aaKnown RBP19.68■□□□□ 0.74
ABCC3-205ENST00000503337 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
ABCC3-205ENST00000503337 DDX10Q13206 875 aaKnown RBP19.64■□□□□ 0.74
ABCC3-205ENST00000503337 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.73
ABCC3-205ENST00000503337 PRG4Q92954 1404 aaPredicted RBP19.63■□□□□ 0.73
ABCC3-205ENST00000503337 RAPGEF6Q8TEU7 1601 aa19.61■□□□□ 0.73
ABCC3-205ENST00000503337 RRP7BPQ9NSQ0 103 aa19.58■□□□□ 0.73
ABCC3-205ENST00000503337 CCER2I3L3R5 266 aa19.58■□□□□ 0.72
ABCC3-205ENST00000503337 ROCK1Q13464 1354 aa19.57■□□□□ 0.72
ABCC3-205ENST00000503337 ANP32CO43423 234 aa19.56■□□□□ 0.72
ABCC3-205ENST00000503337 CDK11AQ9UQ88 783 aaPredicted RBP19.56■□□□□ 0.72
ABCC3-205ENST00000503337 DNMT1P26358 1616 aaKnown RBP19.55■□□□□ 0.72
ABCC3-205ENST00000503337 CHIC2Q9UKJ5 165 aa19.55■□□□□ 0.72
ABCC3-205ENST00000503337 ERCC6L2Q5T890 1561 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms