RNA–Protein interactions for RNA: ENST00000502727.5

PRDM2-212, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-212ENST00000502727 RIMBP3BA6NNM3 1639 aa17.49■□□□□ 0.39
PRDM2-212ENST00000502727 RIMBP3Q9UFD9 1639 aa17.49■□□□□ 0.39
PRDM2-212ENST00000502727 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
PRDM2-212ENST00000502727 SYNJ2O15056 1496 aa17.47■□□□□ 0.39
PRDM2-212ENST00000502727 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
PRDM2-212ENST00000502727 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
PRDM2-212ENST00000502727 CLASP1Q7Z460 1538 aa17.39■□□□□ 0.37
PRDM2-212ENST00000502727 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
PRDM2-212ENST00000502727 ADAMTS12P58397 1594 aa17.36■□□□□ 0.37
PRDM2-212ENST00000502727 GRIN2AQ12879 1464 aa17.32■□□□□ 0.36
PRDM2-212ENST00000502727 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
PRDM2-212ENST00000502727 CYB5RLQ6IPT4 315 aa17.3■□□□□ 0.36
PRDM2-212ENST00000502727 ARAP1Q96P48 1450 aa17.29■□□□□ 0.36
PRDM2-212ENST00000502727 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.36
PRDM2-212ENST00000502727 NUP160Q12769 1436 aa17.26■□□□□ 0.35
PRDM2-212ENST00000502727 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
PRDM2-212ENST00000502727 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
PRDM2-212ENST00000502727 IGF1RP08069 1367 aa17.19■□□□□ 0.34
PRDM2-212ENST00000502727 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
PRDM2-212ENST00000502727 CUL7Q14999 1698 aa17.18■□□□□ 0.34
PRDM2-212ENST00000502727 ERCC6L2Q5T890 1561 aa17.12■□□□□ 0.33
PRDM2-212ENST00000502727 JPH4Q96JJ6 628 aa17.09■□□□□ 0.33
PRDM2-212ENST00000502727 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
PRDM2-212ENST00000502727 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.32
PRDM2-212ENST00000502727 PRG4Q92954 1404 aaPredicted RBP17.06■□□□□ 0.32
PRDM2-212ENST00000502727 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
PRDM2-212ENST00000502727 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
PRDM2-212ENST00000502727 RAPGEF2Q9Y4G8 1499 aa16.96■□□□□ 0.31
PRDM2-212ENST00000502727 IQGAP2Q13576 1575 aa16.93■□□□□ 0.3
PRDM2-212ENST00000502727 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
PRDM2-212ENST00000502727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRDM2-212ENST00000502727 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
PRDM2-212ENST00000502727 CTTNBP2Q8WZ74 1663 aa16.86■□□□□ 0.29
PRDM2-212ENST00000502727 FOXD4L1Q9NU39 408 aa16.85■□□□□ 0.29
PRDM2-212ENST00000502727 PRXQ9BXM0 1461 aa16.85■□□□□ 0.29
PRDM2-212ENST00000502727 ADCY10Q96PN6 1610 aa16.85■□□□□ 0.29
PRDM2-212ENST00000502727 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
PRDM2-212ENST00000502727 PTPRGP23470 1445 aa16.84■□□□□ 0.29
PRDM2-212ENST00000502727 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRDM2-212ENST00000502727 UGGT2Q9NYU1 1516 aa16.83■□□□□ 0.28
PRDM2-212ENST00000502727 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.28
PRDM2-212ENST00000502727 KIF13AQ9H1H9 1805 aa16.82■□□□□ 0.28
PRDM2-212ENST00000502727 DISP1Q96F81 1524 aa16.8■□□□□ 0.28
PRDM2-212ENST00000502727 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
PRDM2-212ENST00000502727 EEA1Q15075 1411 aa16.79■□□□□ 0.28
PRDM2-212ENST00000502727 MAPKBP1O60336 1514 aa16.78■□□□□ 0.28
PRDM2-212ENST00000502727 KIAA0556O60303 1618 aa16.77■□□□□ 0.27
PRDM2-212ENST00000502727 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
PRDM2-212ENST00000502727 ZBTB22O15209 634 aa16.76■□□□□ 0.27
PRDM2-212ENST00000502727 UHRF1BP1LA0JNW5 1464 aa16.73■□□□□ 0.27
PRDM2-212ENST00000502727 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
PRDM2-212ENST00000502727 UACAQ9BZF9 1416 aa16.72■□□□□ 0.27
PRDM2-212ENST00000502727 ABCC10Q5T3U5 1492 aa16.72■□□□□ 0.27
PRDM2-212ENST00000502727 ABCC2Q92887 1545 aa16.71■□□□□ 0.27
PRDM2-212ENST00000502727 FAM69CQ0P6D2 419 aa16.69■□□□□ 0.26
PRDM2-212ENST00000502727 DIP2BQ9P265 1576 aa16.68■□□□□ 0.26
PRDM2-212ENST00000502727 FAM9AQ8IZU1 332 aaPredicted RBP16.66■□□□□ 0.26
PRDM2-212ENST00000502727 RNF39Q9H2S5 420 aa16.66■□□□□ 0.26
PRDM2-212ENST00000502727 MYCNP04198 464 aaPredicted RBP16.64■□□□□ 0.25
PRDM2-212ENST00000502727 KDM5BQ9UGL1 1544 aa16.64■□□□□ 0.25
PRDM2-212ENST00000502727 KIF21BO75037 1637 aa16.63■□□□□ 0.25
PRDM2-212ENST00000502727 TSPOAP1O95153 1857 aa16.63■□□□□ 0.25
PRDM2-212ENST00000502727 PLB1Q6P1J6 1458 aa16.63■□□□□ 0.25
PRDM2-212ENST00000502727 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
PRDM2-212ENST00000502727 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
PRDM2-212ENST00000502727 ZCCHC11Q5TAX3 1644 aaKnown RBP16.62■□□□□ 0.25
PRDM2-212ENST00000502727 ABCA8O94911 1581 aa16.6■□□□□ 0.25
PRDM2-212ENST00000502727 SAMD9Q5K651 1589 aa16.6■□□□□ 0.25
PRDM2-212ENST00000502727 GLI2P10070 1586 aa16.58■□□□□ 0.24
PRDM2-212ENST00000502727 P3H3Q8IVL6 736 aa16.56■□□□□ 0.24
PRDM2-212ENST00000502727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
PRDM2-212ENST00000502727 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
PRDM2-212ENST00000502727 EPRSP07814 1512 aaKnown RBP16.53■□□□□ 0.24
PRDM2-212ENST00000502727 WDR7Q9Y4E6 1490 aa16.51■□□□□ 0.23
PRDM2-212ENST00000502727 C1QBPQ07021 282 aaKnown RBP16.51■□□□□ 0.23
PRDM2-212ENST00000502727 PPRC1Q5VV67 1664 aaKnown RBP16.5■□□□□ 0.23
PRDM2-212ENST00000502727 MAP3K4Q9Y6R4 1608 aa16.49■□□□□ 0.23
PRDM2-212ENST00000502727 RANGAP1P46060 587 aaPredicted RBP16.49■□□□□ 0.23
PRDM2-212ENST00000502727 RAPGEF6Q8TEU7 1601 aa16.48■□□□□ 0.23
PRDM2-212ENST00000502727 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
PRDM2-212ENST00000502727 EFCAB5A4FU69 1503 aa16.48■□□□□ 0.23
PRDM2-212ENST00000502727 KDM6BO15054 1643 aa16.48■□□□□ 0.23
PRDM2-212ENST00000502727 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
PRDM2-212ENST00000502727 ATP10BO94823 1461 aa16.46■□□□□ 0.23
PRDM2-212ENST00000502727 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
PRDM2-212ENST00000502727 CFAP43Q8NDM7 1665 aa16.44■□□□□ 0.22
PRDM2-212ENST00000502727 KCNH8Q96L42 1107 aa16.43■□□□□ 0.22
PRDM2-212ENST00000502727 TEX14Q8IWB6 1497 aa16.42■□□□□ 0.22
PRDM2-212ENST00000502727 ARID3CA6NKF2 412 aa16.41■□□□□ 0.22
PRDM2-212ENST00000502727 APLP2Q06481 763 aa16.4■□□□□ 0.22
PRDM2-212ENST00000502727 NUP153P49790 1475 aaKnown RBP16.39■□□□□ 0.21
PRDM2-212ENST00000502727 CD109Q6YHK3 1445 aa16.37■□□□□ 0.21
PRDM2-212ENST00000502727 MAGI3Q5TCQ9 1506 aa16.37■□□□□ 0.21
PRDM2-212ENST00000502727 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
PRDM2-212ENST00000502727 ATXN8OSP0DMR3 200 aa16.35■□□□□ 0.21
PRDM2-212ENST00000502727 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
PRDM2-212ENST00000502727 FMN1Q68DA7 1419 aa16.33■□□□□ 0.2
PRDM2-212ENST00000502727 COL17A1Q9UMD9 1497 aaPredicted RBP16.33■□□□□ 0.2
PRDM2-212ENST00000502727 PLEKHD1A6NEE1 506 aa16.32■□□□□ 0.2
PRDM2-212ENST00000502727 HECW1Q76N89 1606 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms