RNA–Protein interactions for RNA: ENST00000502660.5

CSF1R-202, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 1,388 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-202ENST00000502660 CTTNBP2Q8WZ74 1663 aa25.9■■□□□ 1.74
CSF1R-202ENST00000502660 RANGAP1P46060 587 aaPredicted RBP25.88■■□□□ 1.73
CSF1R-202ENST00000502660 GRIN2AQ12879 1464 aa25.87■■□□□ 1.73
CSF1R-202ENST00000502660 CHD1O14646 1710 aa25.81■■□□□ 1.72
CSF1R-202ENST00000502660 FBLN2P98095 1184 aa25.79■■□□□ 1.72
CSF1R-202ENST00000502660 ARHGAP35Q9NRY4 1499 aa25.79■■□□□ 1.72
CSF1R-202ENST00000502660 KIAA0586Q9BVV6 1533 aa25.75■■□□□ 1.71
CSF1R-202ENST00000502660 VPS8Q8N3P4 1428 aa25.75■■□□□ 1.71
CSF1R-202ENST00000502660 EFCAB5A4FU69 1503 aa25.75■■□□□ 1.71
CSF1R-202ENST00000502660 ARAP1Q96P48 1450 aa25.74■■□□□ 1.71
CSF1R-202ENST00000502660 IQGAP2Q13576 1575 aa25.72■■□□□ 1.71
CSF1R-202ENST00000502660 NUP160Q12769 1436 aa25.71■■□□□ 1.71
CSF1R-202ENST00000502660 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
CSF1R-202ENST00000502660 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
CSF1R-202ENST00000502660 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
CSF1R-202ENST00000502660 CEP170Q5SW79 1584 aa25.66■■□□□ 1.7
CSF1R-202ENST00000502660 UGGT2Q9NYU1 1516 aa25.64■■□□□ 1.69
CSF1R-202ENST00000502660 SAMD9Q5K651 1589 aa25.63■■□□□ 1.69
CSF1R-202ENST00000502660 P3H3Q8IVL6 736 aa25.61■■□□□ 1.69
CSF1R-202ENST00000502660 ARHGEF11O15085 1522 aa25.6■■□□□ 1.69
CSF1R-202ENST00000502660 APLP2Q06481 763 aa25.57■■□□□ 1.68
CSF1R-202ENST00000502660 FHOD3Q2V2M9 1422 aa25.56■■□□□ 1.68
CSF1R-202ENST00000502660 JPH4Q96JJ6 628 aa25.55■■□□□ 1.68
CSF1R-202ENST00000502660 FMN1Q68DA7 1419 aa25.54■■□□□ 1.68
CSF1R-202ENST00000502660 CLASP1Q7Z460 1538 aa25.48■■□□□ 1.67
CSF1R-202ENST00000502660 DISP1Q96F81 1524 aa25.48■■□□□ 1.67
CSF1R-202ENST00000502660 CARMIL2Q6F5E8 1435 aa25.46■■□□□ 1.67
CSF1R-202ENST00000502660 CASKIN1Q8WXD9 1431 aa25.45■■□□□ 1.66
CSF1R-202ENST00000502660 KIAA0556O60303 1618 aa25.44■■□□□ 1.66
CSF1R-202ENST00000502660 TRIM26Q12899 539 aaPredicted RBP25.43■■□□□ 1.66
CSF1R-202ENST00000502660 FYCO1Q9BQS8 1478 aa25.42■■□□□ 1.66
CSF1R-202ENST00000502660 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
CSF1R-202ENST00000502660 MAP3K1Q13233 1512 aa25.41■■□□□ 1.66
CSF1R-202ENST00000502660 PCF11O94913 1555 aaKnown RBP25.37■■□□□ 1.65
CSF1R-202ENST00000502660 SHROOM2Q13796 1616 aa25.36■■□□□ 1.65
CSF1R-202ENST00000502660 PRG4Q92954 1404 aaPredicted RBP25.35■■□□□ 1.65
CSF1R-202ENST00000502660 ATP1B4Q9UN42 357 aaPredicted RBP25.34■■□□□ 1.65
CSF1R-202ENST00000502660 CYB5RLQ6IPT4 315 aa25.32■■□□□ 1.64
CSF1R-202ENST00000502660 TIAM1Q13009 1591 aa25.3■■□□□ 1.64
CSF1R-202ENST00000502660 KANK4Q5T7N3 995 aaPredicted RBP25.26■■□□□ 1.63
CSF1R-202ENST00000502660 PCGF6Q9BYE7 350 aa25.26■■□□□ 1.63
CSF1R-202ENST00000502660 HECW1Q76N89 1606 aa25.24■■□□□ 1.63
CSF1R-202ENST00000502660 CFAP43Q8NDM7 1665 aa25.23■■□□□ 1.63
CSF1R-202ENST00000502660 TTBK1Q5TCY1 1321 aaPredicted RBP25.22■■□□□ 1.63
CSF1R-202ENST00000502660 CCDC18Q5T9S5 1454 aa25.22■■□□□ 1.63
CSF1R-202ENST00000502660 PTPRGP23470 1445 aa25.21■■□□□ 1.63
CSF1R-202ENST00000502660 LRRC9Q6ZRR7 1453 aa25.2■■□□□ 1.62
CSF1R-202ENST00000502660 RAPGEF6Q8TEU7 1601 aa25.2■■□□□ 1.62
CSF1R-202ENST00000502660 EPRSP07814 1512 aaKnown RBP25.15■■□□□ 1.62
CSF1R-202ENST00000502660 LRRIQ1Q96JM4 1722 aa25.13■■□□□ 1.61
CSF1R-202ENST00000502660 PLB1Q6P1J6 1458 aa25.13■■□□□ 1.61
CSF1R-202ENST00000502660 ABCA8O94911 1581 aa25.12■■□□□ 1.61
CSF1R-202ENST00000502660 NUP153P49790 1475 aaKnown RBP25.11■■□□□ 1.61
CSF1R-202ENST00000502660 ERCC6L2Q5T890 1561 aa25.11■■□□□ 1.61
CSF1R-202ENST00000502660 MTUS2Q5JR59 1369 aa25.09■■□□□ 1.61
CSF1R-202ENST00000502660 CDK11AQ9UQ88 783 aaPredicted RBP25.07■■□□□ 1.6
CSF1R-202ENST00000502660 UACAQ9BZF9 1416 aa25.06■■□□□ 1.6
CSF1R-202ENST00000502660 CDK13Q14004 1512 aaKnown RBP25.03■■□□□ 1.6
CSF1R-202ENST00000502660 EHBP1L1Q8N3D4 1523 aa25.03■■□□□ 1.6
CSF1R-202ENST00000502660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25■■□□□ 1.59
CSF1R-202ENST00000502660 HNRNPUL2Q1KMD3 747 aaKnown RBP25■■□□□ 1.59
CSF1R-202ENST00000502660 ARID3CA6NKF2 412 aa24.99■■□□□ 1.59
CSF1R-202ENST00000502660 ATP10BO94823 1461 aa24.97■■□□□ 1.59
CSF1R-202ENST00000502660 UHRF1BP1LA0JNW5 1464 aa24.96■■□□□ 1.59
CSF1R-202ENST00000502660 RRBP1Q9P2E9 1410 aaKnown RBP24.96■■□□□ 1.59
CSF1R-202ENST00000502660 MAGI3Q5TCQ9 1506 aa24.96■■□□□ 1.59
CSF1R-202ENST00000502660 TRHP20396 242 aaPredicted RBP24.95■■□□□ 1.59
CSF1R-202ENST00000502660 ABCC2Q92887 1545 aa24.95■■□□□ 1.58
CSF1R-202ENST00000502660 SUPT6HQ7KZ85 1726 aaKnown RBP24.95■■□□□ 1.58
CSF1R-202ENST00000502660 PLEKHD1A6NEE1 506 aa24.93■■□□□ 1.58
CSF1R-202ENST00000502660 PHLDB1Q86UU1 1377 aa24.92■■□□□ 1.58
CSF1R-202ENST00000502660 NCOA2Q15596 1464 aa24.91■■□□□ 1.58
CSF1R-202ENST00000502660 TROQ12816 1431 aaPredicted RBP24.91■■□□□ 1.58
CSF1R-202ENST00000502660 CCNB3Q8WWL7 1395 aa24.9■■□□□ 1.58
CSF1R-202ENST00000502660 KDM5BQ9UGL1 1544 aa24.82■■□□□ 1.56
CSF1R-202ENST00000502660 MYOM3Q5VTT5 1437 aa24.82■■□□□ 1.56
CSF1R-202ENST00000502660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.82■■□□□ 1.56
CSF1R-202ENST00000502660 FGD6Q6ZV73 1430 aa24.8■■□□□ 1.56
CSF1R-202ENST00000502660 ADCY10Q96PN6 1610 aa24.8■■□□□ 1.56
CSF1R-202ENST00000502660 MIA2Q96PC5 1412 aa24.76■■□□□ 1.55
CSF1R-202ENST00000502660 ZCCHC11Q5TAX3 1644 aaKnown RBP24.74■■□□□ 1.55
CSF1R-202ENST00000502660 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
CSF1R-202ENST00000502660 KIF14Q15058 1648 aa24.72■■□□□ 1.55
CSF1R-202ENST00000502660 NPM1P06748 294 aaKnown RBP eCLIP24.7■■□□□ 1.55
CSF1R-202ENST00000502660 TCOF1Q13428 1488 aaKnown RBP24.67■■□□□ 1.54
CSF1R-202ENST00000502660 ABCC10Q5T3U5 1492 aa24.67■■□□□ 1.54
CSF1R-202ENST00000502660 PTPN23Q9H3S7 1636 aa24.66■■□□□ 1.54
CSF1R-202ENST00000502660 GPATCH8Q9UKJ3 1502 aaKnown RBP24.65■■□□□ 1.54
CSF1R-202ENST00000502660 ITSN2Q9NZM3 1697 aa24.64■■□□□ 1.54
CSF1R-202ENST00000502660 CFDP1Q9UEE9 299 aaPredicted RBP24.63■■□□□ 1.53
CSF1R-202ENST00000502660 ITGAEP38570 1179 aa24.61■■□□□ 1.53
CSF1R-202ENST00000502660 KCNH8Q96L42 1107 aa24.59■■□□□ 1.53
CSF1R-202ENST00000502660 KIF13AQ9H1H9 1805 aa24.58■■□□□ 1.53
CSF1R-202ENST00000502660 MAPKBP1O60336 1514 aa24.58■■□□□ 1.52
CSF1R-202ENST00000502660 WDR7Q9Y4E6 1490 aa24.58■■□□□ 1.52
CSF1R-202ENST00000502660 CDC42BPAQ5VT25 1732 aa24.56■■□□□ 1.52
CSF1R-202ENST00000502660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.55■■□□□ 1.52
CSF1R-202ENST00000502660 ASXL2Q76L83 1435 aa24.55■■□□□ 1.52
CSF1R-202ENST00000502660 ZNF644Q9H582 1327 aaPredicted RBP24.49■■□□□ 1.51
CSF1R-202ENST00000502660 PREX2Q70Z35 1606 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms