RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 NUP160Q12769 1436 aa21.42■■□□□ 1.02
SGCA-203ENST00000502555 KIAA0586Q9BVV6 1533 aa21.42■■□□□ 1.02
SGCA-203ENST00000502555 EFCAB5A4FU69 1503 aa21.4■■□□□ 1.02
SGCA-203ENST00000502555 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
SGCA-203ENST00000502555 ARHGAP35Q9NRY4 1499 aa21.39■■□□□ 1.02
SGCA-203ENST00000502555 FBLN2P98095 1184 aa21.39■■□□□ 1.01
SGCA-203ENST00000502555 CEP170Q5SW79 1584 aa21.38■■□□□ 1.01
SGCA-203ENST00000502555 RANGAP1P46060 587 aaPredicted RBP21.37■■□□□ 1.01
SGCA-203ENST00000502555 ARAP1Q96P48 1450 aa21.35■■□□□ 1.01
SGCA-203ENST00000502555 VPS8Q8N3P4 1428 aa21.34■■□□□ 1.01
SGCA-203ENST00000502555 CHD1O14646 1710 aa21.32■■□□□ 1
SGCA-203ENST00000502555 UGGT2Q9NYU1 1516 aa21.32■■□□□ 1
SGCA-203ENST00000502555 SAMD9Q5K651 1589 aa21.31■■□□□ 1
SGCA-203ENST00000502555 FHOD3Q2V2M9 1422 aa21.23■□□□□ 0.99
SGCA-203ENST00000502555 DISP1Q96F81 1524 aa21.19■□□□□ 0.98
SGCA-203ENST00000502555 FMN1Q68DA7 1419 aa21.19■□□□□ 0.98
SGCA-203ENST00000502555 JPH4Q96JJ6 628 aa21.18■□□□□ 0.98
SGCA-203ENST00000502555 KIAA0556O60303 1618 aa21.18■□□□□ 0.98
SGCA-203ENST00000502555 P3H3Q8IVL6 736 aa21.17■□□□□ 0.98
SGCA-203ENST00000502555 CLASP1Q7Z460 1538 aa21.17■□□□□ 0.98
SGCA-203ENST00000502555 CARMIL2Q6F5E8 1435 aa21.16■□□□□ 0.98
SGCA-203ENST00000502555 SHROOM2Q13796 1616 aa21.13■□□□□ 0.97
SGCA-203ENST00000502555 CASKIN1Q8WXD9 1431 aa21.11■□□□□ 0.97
SGCA-203ENST00000502555 FYCO1Q9BQS8 1478 aa21.11■□□□□ 0.97
SGCA-203ENST00000502555 PCF11O94913 1555 aaKnown RBP21.09■□□□□ 0.97
SGCA-203ENST00000502555 PRG4Q92954 1404 aaPredicted RBP21.09■□□□□ 0.97
SGCA-203ENST00000502555 APLP2Q06481 763 aa21.08■□□□□ 0.97
SGCA-203ENST00000502555 MAP3K1Q13233 1512 aa21.05■□□□□ 0.96
SGCA-203ENST00000502555 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
SGCA-203ENST00000502555 TIAM1Q13009 1591 aa20.98■□□□□ 0.95
SGCA-203ENST00000502555 DNAJC5Q9H3Z4 198 aa20.98■□□□□ 0.95
SGCA-203ENST00000502555 HECW1Q76N89 1606 aa20.97■□□□□ 0.95
SGCA-203ENST00000502555 CCDC18Q5T9S5 1454 aa20.95■□□□□ 0.94
SGCA-203ENST00000502555 CFAP43Q8NDM7 1665 aa20.95■□□□□ 0.94
SGCA-203ENST00000502555 PTPRGP23470 1445 aa20.94■□□□□ 0.94
SGCA-203ENST00000502555 ATP1B4Q9UN42 357 aaPredicted RBP20.93■□□□□ 0.94
SGCA-203ENST00000502555 RAPGEF6Q8TEU7 1601 aa20.93■□□□□ 0.94
SGCA-203ENST00000502555 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
SGCA-203ENST00000502555 PPARGC1BQ86YN6 1023 aaKnown RBP20.91■□□□□ 0.94
SGCA-203ENST00000502555 ABCA8O94911 1581 aa20.91■□□□□ 0.94
SGCA-203ENST00000502555 PLB1Q6P1J6 1458 aa20.89■□□□□ 0.94
SGCA-203ENST00000502555 NUP153P49790 1475 aaKnown RBP20.89■□□□□ 0.93
SGCA-203ENST00000502555 LRRC9Q6ZRR7 1453 aa20.89■□□□□ 0.93
SGCA-203ENST00000502555 EPRSP07814 1512 aaKnown RBP20.89■□□□□ 0.93
SGCA-203ENST00000502555 TTBK1Q5TCY1 1321 aaPredicted RBP20.88■□□□□ 0.93
SGCA-203ENST00000502555 TRIM26Q12899 539 aaPredicted RBP20.87■□□□□ 0.93
SGCA-203ENST00000502555 KANK4Q5T7N3 995 aaPredicted RBP20.86■□□□□ 0.93
SGCA-203ENST00000502555 LRRIQ1Q96JM4 1722 aa20.84■□□□□ 0.93
SGCA-203ENST00000502555 UACAQ9BZF9 1416 aa20.84■□□□□ 0.93
SGCA-203ENST00000502555 CDK13Q14004 1512 aaKnown RBP20.8■□□□□ 0.92
SGCA-203ENST00000502555 EHBP1L1Q8N3D4 1523 aa20.8■□□□□ 0.92
SGCA-203ENST00000502555 MTUS2Q5JR59 1369 aa20.79■□□□□ 0.92
SGCA-203ENST00000502555 ABCC2Q92887 1545 aa20.78■□□□□ 0.92
SGCA-203ENST00000502555 UHRF1BP1LA0JNW5 1464 aa20.78■□□□□ 0.92
SGCA-203ENST00000502555 CDK11AQ9UQ88 783 aaPredicted RBP20.75■□□□□ 0.91
SGCA-203ENST00000502555 ATP10BO94823 1461 aa20.73■□□□□ 0.91
SGCA-203ENST00000502555 MAGI3Q5TCQ9 1506 aa20.72■□□□□ 0.91
SGCA-203ENST00000502555 ARHGEF11O15085 1522 aa20.71■□□□□ 0.91
SGCA-203ENST00000502555 ARID3CA6NKF2 412 aa20.71■□□□□ 0.91
SGCA-203ENST00000502555 PCGF6Q9BYE7 350 aa20.71■□□□□ 0.91
SGCA-203ENST00000502555 TROQ12816 1431 aaPredicted RBP20.69■□□□□ 0.9
SGCA-203ENST00000502555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
SGCA-203ENST00000502555 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
SGCA-203ENST00000502555 SUPT6HQ7KZ85 1726 aaKnown RBP20.68■□□□□ 0.9
SGCA-203ENST00000502555 KDM5BQ9UGL1 1544 aa20.67■□□□□ 0.9
SGCA-203ENST00000502555 RRBP1Q9P2E9 1410 aaKnown RBP20.66■□□□□ 0.9
SGCA-203ENST00000502555 NCOA2Q15596 1464 aa20.66■□□□□ 0.9
SGCA-203ENST00000502555 PHLDB1Q86UU1 1377 aa20.65■□□□□ 0.9
SGCA-203ENST00000502555 ADCY10Q96PN6 1610 aa20.63■□□□□ 0.89
SGCA-203ENST00000502555 PLEKHD1A6NEE1 506 aa20.62■□□□□ 0.89
SGCA-203ENST00000502555 CCNB3Q8WWL7 1395 aa20.6■□□□□ 0.89
SGCA-203ENST00000502555 RIMBP3CA6NJZ7 1639 aa20.59■□□□□ 0.89
SGCA-203ENST00000502555 RIMBP3BA6NNM3 1639 aa20.59■□□□□ 0.89
SGCA-203ENST00000502555 ZCCHC11Q5TAX3 1644 aaKnown RBP20.59■□□□□ 0.89
SGCA-203ENST00000502555 RIMBP3Q9UFD9 1639 aa20.59■□□□□ 0.89
SGCA-203ENST00000502555 MYOM3Q5VTT5 1437 aa20.59■□□□□ 0.89
SGCA-203ENST00000502555 KIF14Q15058 1648 aa20.57■□□□□ 0.88
SGCA-203ENST00000502555 FGD6Q6ZV73 1430 aa20.56■□□□□ 0.88
SGCA-203ENST00000502555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.54■□□□□ 0.88
SGCA-203ENST00000502555 MIA2Q96PC5 1412 aa20.53■□□□□ 0.88
SGCA-203ENST00000502555 ABCC10Q5T3U5 1492 aa20.5■□□□□ 0.87
SGCA-203ENST00000502555 WDR7Q9Y4E6 1490 aa20.48■□□□□ 0.87
SGCA-203ENST00000502555 NPM1P06748 294 aaKnown RBP eCLIP20.48■□□□□ 0.87
SGCA-203ENST00000502555 ITSN2Q9NZM3 1697 aa20.47■□□□□ 0.87
SGCA-203ENST00000502555 TCOF1Q13428 1488 aaKnown RBP20.46■□□□□ 0.87
SGCA-203ENST00000502555 GPATCH8Q9UKJ3 1502 aaKnown RBP20.46■□□□□ 0.87
SGCA-203ENST00000502555 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
SGCA-203ENST00000502555 ASXL2Q76L83 1435 aa20.44■□□□□ 0.86
SGCA-203ENST00000502555 PTPN23Q9H3S7 1636 aa20.44■□□□□ 0.86
SGCA-203ENST00000502555 FAM50AQ14320 339 aaKnown RBP20.43■□□□□ 0.86
SGCA-203ENST00000502555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.41■□□□□ 0.86
SGCA-203ENST00000502555 CFDP1Q9UEE9 299 aaPredicted RBP20.39■□□□□ 0.85
SGCA-203ENST00000502555 TTC37Q6PGP7 1564 aa20.39■□□□□ 0.85
SGCA-203ENST00000502555 MAPKBP1O60336 1514 aa20.38■□□□□ 0.85
SGCA-203ENST00000502555 PREX2Q70Z35 1606 aa20.37■□□□□ 0.85
SGCA-203ENST00000502555 CDC42BPAQ5VT25 1732 aa20.37■□□□□ 0.85
SGCA-203ENST00000502555 KCNH8Q96L42 1107 aa20.36■□□□□ 0.85
SGCA-203ENST00000502555 CAMSAP2Q08AD1 1489 aa20.34■□□□□ 0.85
SGCA-203ENST00000502555 ARAP3Q8WWN8 1544 aa20.33■□□□□ 0.85
SGCA-203ENST00000502555 ABCA9Q8IUA7 1624 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms