RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 PELP1Q8IZL8 1130 aaKnown RBP34.2■■■■□ 3.06
SNF8-202ENST00000502492 KANK4Q5T7N3 995 aaPredicted RBP34.17■■■■□ 3.06
SNF8-202ENST00000502492 TDRD9Q8NDG6 1382 aaKnown RBP34.17■■■■□ 3.06
SNF8-202ENST00000502492 CLSPNQ9HAW4 1339 aa34.15■■■■□ 3.06
SNF8-202ENST00000502492 ARHGAP35Q9NRY4 1499 aa34.13■■■■□ 3.05
SNF8-202ENST00000502492 RRBP1Q9P2E9 1410 aaKnown RBP34.12■■■■□ 3.05
SNF8-202ENST00000502492 ABCA5Q8WWZ7 1642 aa34.09■■■■□ 3.05
SNF8-202ENST00000502492 ZNF608Q9ULD9 1512 aaPredicted RBP34.09■■■■□ 3.05
SNF8-202ENST00000502492 GAPVD1Q14C86 1478 aa34.06■■■■□ 3.04
SNF8-202ENST00000502492 IGF1RP08069 1367 aa34.06■■■■□ 3.04
SNF8-202ENST00000502492 DHX57Q6P158 1386 aaKnown RBP34.05■■■■□ 3.04
SNF8-202ENST00000502492 AQRO60306 1485 aaKnown RBP eCLIP34.04■■■■□ 3.043e-6■■■□□ 17.8
SNF8-202ENST00000502492 GTF3C3Q9Y5Q9 886 aa34■■■■□ 3.03
SNF8-202ENST00000502492 EIF4G3O43432 1585 aaKnown RBP33.95■■■■□ 3.02
SNF8-202ENST00000502492 MIER1Q8N108 512 aa33.93■■■■□ 3.02
SNF8-202ENST00000502492 CCNB3Q8WWL7 1395 aa33.91■■■■□ 3.02
SNF8-202ENST00000502492 GRIN2BQ13224 1484 aa33.89■■■■□ 3.02
SNF8-202ENST00000502492 CARMIL1Q5VZK9 1371 aa33.89■■■■□ 3.02
SNF8-202ENST00000502492 MAP3K1Q13233 1512 aa33.88■■■■□ 3.01
SNF8-202ENST00000502492 PBRM1Q86U86 1689 aa33.86■■■■□ 3.01
SNF8-202ENST00000502492 CUL7Q14999 1698 aa33.8■■■■□ 3
SNF8-202ENST00000502492 TIAM1Q13009 1591 aa33.8■■■■□ 3
SNF8-202ENST00000502492 SNAPC4Q5SXM2 1469 aa33.73■■■□□ 2.99
SNF8-202ENST00000502492 YTHDC1Q96MU7 727 aaKnown RBP33.72■■■□□ 2.99
SNF8-202ENST00000502492 FHAD1B1AJZ9 1412 aa33.7■■■□□ 2.99
SNF8-202ENST00000502492 ADAMTS12P58397 1594 aa33.69■■■□□ 2.98
SNF8-202ENST00000502492 MAGI1Q96QZ7 1491 aaPredicted RBP33.68■■■□□ 2.98
SNF8-202ENST00000502492 LRRC9Q6ZRR7 1453 aa33.67■■■□□ 2.98
SNF8-202ENST00000502492 CFAP43Q8NDM7 1665 aa33.57■■■□□ 2.96
SNF8-202ENST00000502492 RAB3GAP2Q9H2M9 1393 aa33.57■■■□□ 2.96
SNF8-202ENST00000502492 ITGAEP38570 1179 aa33.56■■■□□ 2.96
SNF8-202ENST00000502492 SYNJ2O15056 1496 aa33.55■■■□□ 2.96
SNF8-202ENST00000502492 PHLDB1Q86UU1 1377 aa33.53■■■□□ 2.96
SNF8-202ENST00000502492 PCF11O94913 1555 aaKnown RBP33.53■■■□□ 2.96
SNF8-202ENST00000502492 CHMP7Q8WUX9 453 aaPredicted RBP33.5■■■□□ 2.95
SNF8-202ENST00000502492 MAPKBP1O60336 1514 aa33.49■■■□□ 2.95
SNF8-202ENST00000502492 SETD5Q9C0A6 1442 aa33.48■■■□□ 2.95
SNF8-202ENST00000502492 GRIN2AQ12879 1464 aa33.47■■■□□ 2.95
SNF8-202ENST00000502492 EFCAB5A4FU69 1503 aa33.47■■■□□ 2.95
SNF8-202ENST00000502492 FBLN2P98095 1184 aa33.45■■■□□ 2.94
SNF8-202ENST00000502492 FYCO1Q9BQS8 1478 aa33.42■■■□□ 2.94
SNF8-202ENST00000502492 FHOD3Q2V2M9 1422 aa33.39■■■□□ 2.94
SNF8-202ENST00000502492 P3H3Q8IVL6 736 aa33.39■■■□□ 2.94
SNF8-202ENST00000502492 CASKIN1Q8WXD9 1431 aa33.38■■■□□ 2.93
SNF8-202ENST00000502492 CTTNBP2Q8WZ74 1663 aa33.36■■■□□ 2.93
SNF8-202ENST00000502492 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.31■■■□□ 2.923e-6■□□□□ 10.3
SNF8-202ENST00000502492 FAM50AQ14320 339 aaKnown RBP33.3■■■□□ 2.92
SNF8-202ENST00000502492 CHD1O14646 1710 aa33.28■■■□□ 2.92
SNF8-202ENST00000502492 NUP160Q12769 1436 aa33.28■■■□□ 2.92
SNF8-202ENST00000502492 CEP170Q5SW79 1584 aa33.26■■■□□ 2.92
SNF8-202ENST00000502492 ATP1B4Q9UN42 357 aaPredicted RBP33.24■■■□□ 2.91
SNF8-202ENST00000502492 FMN1Q68DA7 1419 aa33.24■■■□□ 2.91
SNF8-202ENST00000502492 KIAA0586Q9BVV6 1533 aa33.22■■■□□ 2.91
SNF8-202ENST00000502492 IQGAP2Q13576 1575 aa33.18■■■□□ 2.9
SNF8-202ENST00000502492 TIMELESSQ9UNS1 1208 aa33.15■■■□□ 2.9
SNF8-202ENST00000502492 SAMD9Q5K651 1589 aa33.14■■■□□ 2.89
SNF8-202ENST00000502492 FGD6Q6ZV73 1430 aa33.11■■■□□ 2.89
SNF8-202ENST00000502492 SIN3AQ96ST3 1273 aa33.1■■■□□ 2.89
SNF8-202ENST00000502492 UGGT2Q9NYU1 1516 aa33.03■■■□□ 2.88
SNF8-202ENST00000502492 MTUS2Q5JR59 1369 aa33.01■■■□□ 2.87
SNF8-202ENST00000502492 LRRIQ1Q96JM4 1722 aa33■■■□□ 2.87
SNF8-202ENST00000502492 JPH4Q96JJ6 628 aa32.99■■■□□ 2.87
SNF8-202ENST00000502492 CLASP1Q7Z460 1538 aa32.97■■■□□ 2.87
SNF8-202ENST00000502492 HFM1A2PYH4 1435 aa32.94■■■□□ 2.86
SNF8-202ENST00000502492 OSCARQ8IYS5 282 aa32.94■■■□□ 2.86
SNF8-202ENST00000502492 PPP1R15AO75807 674 aaPredicted RBP32.93■■■□□ 2.86
SNF8-202ENST00000502492 PTPRKQ15262 1439 aa32.91■■■□□ 2.86
SNF8-202ENST00000502492 NCOA2Q15596 1464 aa32.91■■■□□ 2.86
SNF8-202ENST00000502492 CCDC18Q5T9S5 1454 aa32.9■■■□□ 2.86
SNF8-202ENST00000502492 DISP1Q96F81 1524 aa32.9■■■□□ 2.86
SNF8-202ENST00000502492 MYOM3Q5VTT5 1437 aa32.9■■■□□ 2.86
SNF8-202ENST00000502492 PTPN23Q9H3S7 1636 aa32.87■■■□□ 2.85
SNF8-202ENST00000502492 EHBP1L1Q8N3D4 1523 aa32.87■■■□□ 2.85
SNF8-202ENST00000502492 SUPT6HQ7KZ85 1726 aaKnown RBP32.87■■■□□ 2.85
SNF8-202ENST00000502492 UACAQ9BZF9 1416 aa32.86■■■□□ 2.85
SNF8-202ENST00000502492 SHROOM2Q13796 1616 aa32.86■■■□□ 2.85
SNF8-202ENST00000502492 KIAA0556O60303 1618 aa32.85■■■□□ 2.85
SNF8-202ENST00000502492 SUPT16HQ9Y5B9 1047 aaKnown RBP32.83■■■□□ 2.85
SNF8-202ENST00000502492 PRG4Q92954 1404 aaPredicted RBP32.83■■■□□ 2.85
SNF8-202ENST00000502492 CARMIL2Q6F5E8 1435 aa32.82■■■□□ 2.84
SNF8-202ENST00000502492 DDX10Q13206 875 aaKnown RBP32.82■■■□□ 2.84
SNF8-202ENST00000502492 ARHGEF11O15085 1522 aa32.81■■■□□ 2.84
SNF8-202ENST00000502492 KCNH8Q96L42 1107 aa32.81■■■□□ 2.84
SNF8-202ENST00000502492 NAIPQ13075 1403 aa32.81■■■□□ 2.84
SNF8-202ENST00000502492 MAGI3Q5TCQ9 1506 aa32.74■■■□□ 2.83
SNF8-202ENST00000502492 TONSLQ96HA7 1378 aa32.73■■■□□ 2.83
SNF8-202ENST00000502492 TCOF1Q13428 1488 aaKnown RBP32.68■■■□□ 2.82
SNF8-202ENST00000502492 HECW1Q76N89 1606 aa32.67■■■□□ 2.82
SNF8-202ENST00000502492 ERCC6L2Q5T890 1561 aa32.67■■■□□ 2.82
SNF8-202ENST00000502492 HIRIP3Q9BW71 556 aaPredicted RBP32.62■■■□□ 2.81
SNF8-202ENST00000502492 CCER2I3L3R5 266 aa32.6■■■□□ 2.81
SNF8-202ENST00000502492 EPRSP07814 1512 aaKnown RBP32.6■■■□□ 2.81
SNF8-202ENST00000502492 KDM5BQ9UGL1 1544 aa32.58■■■□□ 2.81
SNF8-202ENST00000502492 GCC2Q8IWJ2 1684 aa32.58■■■□□ 2.81
SNF8-202ENST00000502492 AKNAQ7Z591 1439 aa32.58■■■□□ 2.81
SNF8-202ENST00000502492 PTPRGP23470 1445 aa32.57■■■□□ 2.8
SNF8-202ENST00000502492 MIA2Q96PC5 1412 aa32.53■■■□□ 2.8
SNF8-202ENST00000502492 ANP32CO43423 234 aa32.52■■■□□ 2.8
SNF8-202ENST00000502492 PLB1Q6P1J6 1458 aa32.49■■■□□ 2.79
SNF8-202ENST00000502492 RRP7BPQ9NSQ0 103 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms