RNA–Protein interactions for RNA: ENST00000502409.1

PRDM5-204, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 1,044 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-204ENST00000502409 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
PRDM5-204ENST00000502409 NUP160Q12769 1436 aa20.7■□□□□ 0.9
PRDM5-204ENST00000502409 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
PRDM5-204ENST00000502409 RAPGEF2Q9Y4G8 1499 aa20.67■□□□□ 0.9
PRDM5-204ENST00000502409 CEP170Q5SW79 1584 aa20.64■□□□□ 0.9
PRDM5-204ENST00000502409 PRXQ9BXM0 1461 aa20.63■□□□□ 0.89
PRDM5-204ENST00000502409 CSRNP3Q8WYN3 585 aa20.63■□□□□ 0.89
PRDM5-204ENST00000502409 KIAA0586Q9BVV6 1533 aa20.56■□□□□ 0.88
PRDM5-204ENST00000502409 KIF21BO75037 1637 aa20.54■□□□□ 0.88
PRDM5-204ENST00000502409 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
PRDM5-204ENST00000502409 ARHGEF11O15085 1522 aa20.5■□□□□ 0.87
PRDM5-204ENST00000502409 CTTNBP2Q8WZ74 1663 aa20.49■□□□□ 0.87
PRDM5-204ENST00000502409 FAM9AQ8IZU1 332 aaPredicted RBP20.49■□□□□ 0.87
PRDM5-204ENST00000502409 IQGAP2Q13576 1575 aa20.49■□□□□ 0.87
PRDM5-204ENST00000502409 RIMBP3CA6NJZ7 1639 aa20.47■□□□□ 0.87
PRDM5-204ENST00000502409 RIMBP3BA6NNM3 1639 aa20.47■□□□□ 0.87
PRDM5-204ENST00000502409 RIMBP3Q9UFD9 1639 aa20.47■□□□□ 0.87
PRDM5-204ENST00000502409 JPH4Q96JJ6 628 aa20.43■□□□□ 0.86
PRDM5-204ENST00000502409 GOLGA3Q08378 1498 aa20.41■□□□□ 0.86
PRDM5-204ENST00000502409 UGGT2Q9NYU1 1516 aa20.38■□□□□ 0.85
PRDM5-204ENST00000502409 PRG4Q92954 1404 aaPredicted RBP20.38■□□□□ 0.85
PRDM5-204ENST00000502409 CARMIL2Q6F5E8 1435 aa20.36■□□□□ 0.85
PRDM5-204ENST00000502409 ARAP1Q96P48 1450 aa20.33■□□□□ 0.85
PRDM5-204ENST00000502409 ERCC6L2Q5T890 1561 aa20.31■□□□□ 0.84
PRDM5-204ENST00000502409 DISP1Q96F81 1524 aa20.27■□□□□ 0.84
PRDM5-204ENST00000502409 KIAA0556O60303 1618 aa20.27■□□□□ 0.84
PRDM5-204ENST00000502409 UBTFP17480 764 aaKnown RBP20.26■□□□□ 0.83
PRDM5-204ENST00000502409 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
PRDM5-204ENST00000502409 SAMD9Q5K651 1589 aa20.23■□□□□ 0.83
PRDM5-204ENST00000502409 EFCAB5A4FU69 1503 aa20.22■□□□□ 0.83
PRDM5-204ENST00000502409 MAPK8IP2Q13387 824 aaPredicted RBP20.21■□□□□ 0.83
PRDM5-204ENST00000502409 CYB5RLQ6IPT4 315 aa20.21■□□□□ 0.83
PRDM5-204ENST00000502409 PTPRGP23470 1445 aa20.18■□□□□ 0.82
PRDM5-204ENST00000502409 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
PRDM5-204ENST00000502409 EHMT2Q96KQ7 1210 aa20.13■□□□□ 0.81
PRDM5-204ENST00000502409 UHRF1BP1LA0JNW5 1464 aa20.09■□□□□ 0.81
PRDM5-204ENST00000502409 UACAQ9BZF9 1416 aa20.07■□□□□ 0.8
PRDM5-204ENST00000502409 ADCY10Q96PN6 1610 aa20.06■□□□□ 0.8
PRDM5-204ENST00000502409 ABCC2Q92887 1545 aa20.06■□□□□ 0.8
PRDM5-204ENST00000502409 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
PRDM5-204ENST00000502409 SCAF1Q9H7N4 1312 aaKnown RBP20.03■□□□□ 0.8
PRDM5-204ENST00000502409 FHOD3Q2V2M9 1422 aa20.03■□□□□ 0.8
PRDM5-204ENST00000502409 ABCA8O94911 1581 aa20.03■□□□□ 0.8
PRDM5-204ENST00000502409 RANGAP1P46060 587 aaPredicted RBP20.02■□□□□ 0.8
PRDM5-204ENST00000502409 CLIP1P30622 1438 aa20.02■□□□□ 0.79
PRDM5-204ENST00000502409 P3H3Q8IVL6 736 aa20.01■□□□□ 0.79
PRDM5-204ENST00000502409 FMN1Q68DA7 1419 aa20.01■□□□□ 0.79
PRDM5-204ENST00000502409 TTBK1Q5TCY1 1321 aaPredicted RBP20■□□□□ 0.79
PRDM5-204ENST00000502409 NPM1P06748 294 aaKnown RBP eCLIP19.99■□□□□ 0.79
PRDM5-204ENST00000502409 PLB1Q6P1J6 1458 aa19.99■□□□□ 0.79
PRDM5-204ENST00000502409 RAPGEF6Q8TEU7 1601 aa19.98■□□□□ 0.79
PRDM5-204ENST00000502409 CEP162Q5TB80 1403 aa19.97■□□□□ 0.79
PRDM5-204ENST00000502409 KDM5BQ9UGL1 1544 aa19.97■□□□□ 0.79
PRDM5-204ENST00000502409 MAPKBP1O60336 1514 aa19.96■□□□□ 0.79
PRDM5-204ENST00000502409 LOC105371045A0A1W2PR82 267 aa19.95■□□□□ 0.78
PRDM5-204ENST00000502409 ZCCHC11Q5TAX3 1644 aaKnown RBP19.91■□□□□ 0.78
PRDM5-204ENST00000502409 HECW1Q76N89 1606 aa19.9■□□□□ 0.78
PRDM5-204ENST00000502409 NUP153P49790 1475 aaKnown RBP19.87■□□□□ 0.77
PRDM5-204ENST00000502409 CASKIN1Q8WXD9 1431 aa19.85■□□□□ 0.77
PRDM5-204ENST00000502409 FYCO1Q9BQS8 1478 aa19.84■□□□□ 0.77
PRDM5-204ENST00000502409 ATP10BO94823 1461 aa19.83■□□□□ 0.76
PRDM5-204ENST00000502409 ASXL2Q76L83 1435 aa19.83■□□□□ 0.76
PRDM5-204ENST00000502409 PCF11O94913 1555 aaKnown RBP19.82■□□□□ 0.76
PRDM5-204ENST00000502409 ABCC10Q5T3U5 1492 aa19.79■□□□□ 0.76
PRDM5-204ENST00000502409 CCDC18Q5T9S5 1454 aa19.79■□□□□ 0.76
PRDM5-204ENST00000502409 WDR7Q9Y4E6 1490 aa19.79■□□□□ 0.76
PRDM5-204ENST00000502409 EPRSP07814 1512 aaKnown RBP19.78■□□□□ 0.76
PRDM5-204ENST00000502409 DIP2BQ9P265 1576 aa19.78■□□□□ 0.76
PRDM5-204ENST00000502409 KIF13AQ9H1H9 1805 aa19.75■□□□□ 0.75
PRDM5-204ENST00000502409 VPS8Q8N3P4 1428 aa19.75■□□□□ 0.75
PRDM5-204ENST00000502409 GLI2P10070 1586 aa19.74■□□□□ 0.75
PRDM5-204ENST00000502409 TRHP20396 242 aaPredicted RBP19.74■□□□□ 0.75
PRDM5-204ENST00000502409 CDK13Q14004 1512 aaKnown RBP19.72■□□□□ 0.75
PRDM5-204ENST00000502409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
PRDM5-204ENST00000502409 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
PRDM5-204ENST00000502409 ATP1B4Q9UN42 357 aaPredicted RBP19.72■□□□□ 0.75
PRDM5-204ENST00000502409 CDK11AQ9UQ88 783 aaPredicted RBP19.72■□□□□ 0.75
PRDM5-204ENST00000502409 LRRIQ1Q96JM4 1722 aa19.71■□□□□ 0.75
PRDM5-204ENST00000502409 PLEKHD1A6NEE1 506 aa19.69■□□□□ 0.74
PRDM5-204ENST00000502409 ARID3CA6NKF2 412 aa19.68■□□□□ 0.74
PRDM5-204ENST00000502409 FAM69CQ0P6D2 419 aa19.68■□□□□ 0.74
PRDM5-204ENST00000502409 CFAP43Q8NDM7 1665 aa19.66■□□□□ 0.74
PRDM5-204ENST00000502409 MAP3K4Q9Y6R4 1608 aa19.64■□□□□ 0.73
PRDM5-204ENST00000502409 ABCA9Q8IUA7 1624 aa19.63■□□□□ 0.73
PRDM5-204ENST00000502409 TROQ12816 1431 aaPredicted RBP19.63■□□□□ 0.73
PRDM5-204ENST00000502409 MAP3K1Q13233 1512 aa19.61■□□□□ 0.73
PRDM5-204ENST00000502409 KIF14Q15058 1648 aa19.6■□□□□ 0.73
PRDM5-204ENST00000502409 KCNH8Q96L42 1107 aa19.59■□□□□ 0.73
PRDM5-204ENST00000502409 TIAM1Q13009 1591 aa19.58■□□□□ 0.73
PRDM5-204ENST00000502409 TEX14Q8IWB6 1497 aa19.58■□□□□ 0.72
PRDM5-204ENST00000502409 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
PRDM5-204ENST00000502409 EHBP1L1Q8N3D4 1523 aa19.56■□□□□ 0.72
PRDM5-204ENST00000502409 CD109Q6YHK3 1445 aa19.56■□□□□ 0.72
PRDM5-204ENST00000502409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.55■□□□□ 0.72
PRDM5-204ENST00000502409 MTUS2Q5JR59 1369 aa19.54■□□□□ 0.72
PRDM5-204ENST00000502409 TSPOAP1O95153 1857 aa19.54■□□□□ 0.72
PRDM5-204ENST00000502409 PPRC1Q5VV67 1664 aaKnown RBP19.53■□□□□ 0.72
PRDM5-204ENST00000502409 TTC37Q6PGP7 1564 aa19.52■□□□□ 0.71
PRDM5-204ENST00000502409 APLP2Q06481 763 aa19.51■□□□□ 0.71
PRDM5-204ENST00000502409 ARAP3Q8WWN8 1544 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms