RNA–Protein interactions for RNA: ENST00000501855.6

LINC00847-201, long intergenic non-protein coding RNA 847, humanhuman

TSL 1 (best) BASIC

Gene LINC00847, Length 1,871 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00847-201ENST00000501855 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
LINC00847-201ENST00000501855 NEUROD1Q13562 356 aa25.3■■□□□ 1.64
LINC00847-201ENST00000501855 FHAD1B1AJZ9 1412 aa25.29■■□□□ 1.64
LINC00847-201ENST00000501855 CTTNBP2Q8WZ74 1663 aa25.29■■□□□ 1.64
LINC00847-201ENST00000501855 PCF11O94913 1555 aaKnown RBP25.28■■□□□ 1.64
LINC00847-201ENST00000501855 CENPBP07199 599 aaPredicted RBP25.28■■□□□ 1.64
LINC00847-201ENST00000501855 LRRC9Q6ZRR7 1453 aa25.27■■□□□ 1.64
LINC00847-201ENST00000501855 EFCAB5A4FU69 1503 aa25.26■■□□□ 1.63
LINC00847-201ENST00000501855 URB2Q14146 1524 aaKnown RBP25.21■■□□□ 1.63
LINC00847-201ENST00000501855 PDS5BQ9NTI5 1447 aa25.21■■□□□ 1.63
LINC00847-201ENST00000501855 ABCA5Q8WWZ7 1642 aa25.17■■□□□ 1.62
LINC00847-201ENST00000501855 FYCO1Q9BQS8 1478 aa25.17■■□□□ 1.62
LINC00847-201ENST00000501855 AQRO60306 1485 aaKnown RBP eCLIP25.16■■□□□ 1.62
LINC00847-201ENST00000501855 FHOD3Q2V2M9 1422 aa25.12■■□□□ 1.61
LINC00847-201ENST00000501855 PHLDB1Q86UU1 1377 aa25.12■■□□□ 1.61
LINC00847-201ENST00000501855 CASKIN1Q8WXD9 1431 aa25.11■■□□□ 1.61
LINC00847-201ENST00000501855 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
LINC00847-201ENST00000501855 MIER1Q8N108 512 aa25.1■■□□□ 1.61
LINC00847-201ENST00000501855 RAB3GAP2Q9H2M9 1393 aa25.08■■□□□ 1.61
LINC00847-201ENST00000501855 SAMD9Q5K651 1589 aa25.05■■□□□ 1.6
LINC00847-201ENST00000501855 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
LINC00847-201ENST00000501855 MAPKBP1O60336 1514 aa25.04■■□□□ 1.6
LINC00847-201ENST00000501855 ITGAEP38570 1179 aa25.04■■□□□ 1.6
LINC00847-201ENST00000501855 SETD5Q9C0A6 1442 aa25.04■■□□□ 1.6
LINC00847-201ENST00000501855 FMN1Q68DA7 1419 aa25.01■■□□□ 1.59
LINC00847-201ENST00000501855 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
LINC00847-201ENST00000501855 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
LINC00847-201ENST00000501855 GTF3C3Q9Y5Q9 886 aa25■■□□□ 1.59
LINC00847-201ENST00000501855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.98■■□□□ 1.59
LINC00847-201ENST00000501855 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
LINC00847-201ENST00000501855 TARBP1Q13395 1621 aaKnown RBP24.96■■□□□ 1.59
LINC00847-201ENST00000501855 TDRD9Q8NDG6 1382 aaKnown RBP24.95■■□□□ 1.58
LINC00847-201ENST00000501855 LRRIQ1Q96JM4 1722 aa24.95■■□□□ 1.58
LINC00847-201ENST00000501855 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
LINC00847-201ENST00000501855 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
LINC00847-201ENST00000501855 THOC2Q8NI27 1593 aaKnown RBP24.91■■□□□ 1.58
LINC00847-201ENST00000501855 FAM50AQ14320 339 aaKnown RBP24.91■■□□□ 1.58
LINC00847-201ENST00000501855 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
LINC00847-201ENST00000501855 YTHDC1Q96MU7 727 aaKnown RBP24.89■■□□□ 1.57
LINC00847-201ENST00000501855 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
LINC00847-201ENST00000501855 GRIN2BQ13224 1484 aa24.88■■□□□ 1.57
LINC00847-201ENST00000501855 FGD6Q6ZV73 1430 aa24.85■■□□□ 1.57
LINC00847-201ENST00000501855 WDR62O43379 1518 aa24.82■■□□□ 1.56
LINC00847-201ENST00000501855 SUPT6HQ7KZ85 1726 aaKnown RBP24.79■■□□□ 1.56
LINC00847-201ENST00000501855 EHBP1L1Q8N3D4 1523 aa24.78■■□□□ 1.56
LINC00847-201ENST00000501855 MTUS2Q5JR59 1369 aa24.78■■□□□ 1.56
LINC00847-201ENST00000501855 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
LINC00847-201ENST00000501855 NCOA2Q15596 1464 aa24.74■■□□□ 1.55
LINC00847-201ENST00000501855 MYOM3Q5VTT5 1437 aa24.71■■□□□ 1.55
LINC00847-201ENST00000501855 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
LINC00847-201ENST00000501855 IQGAP2Q13576 1575 aa24.71■■□□□ 1.55
LINC00847-201ENST00000501855 CCDC18Q5T9S5 1454 aa24.71■■□□□ 1.55
LINC00847-201ENST00000501855 TIMELESSQ9UNS1 1208 aa24.7■■□□□ 1.55
LINC00847-201ENST00000501855 PTPN23Q9H3S7 1636 aa24.7■■□□□ 1.55
LINC00847-201ENST00000501855 UGGT2Q9NYU1 1516 aa24.7■■□□□ 1.54
LINC00847-201ENST00000501855 HECW1Q76N89 1606 aa24.69■■□□□ 1.54
LINC00847-201ENST00000501855 HFM1A2PYH4 1435 aa24.68■■□□□ 1.54
LINC00847-201ENST00000501855 PTPRKQ15262 1439 aa24.67■■□□□ 1.54
LINC00847-201ENST00000501855 SIN3AQ96ST3 1273 aa24.66■■□□□ 1.54
LINC00847-201ENST00000501855 MAGI3Q5TCQ9 1506 aa24.66■■□□□ 1.54
LINC00847-201ENST00000501855 UACAQ9BZF9 1416 aa24.6■■□□□ 1.53
LINC00847-201ENST00000501855 TCOF1Q13428 1488 aaKnown RBP24.6■■□□□ 1.53
LINC00847-201ENST00000501855 NAIPQ13075 1403 aa24.59■■□□□ 1.53
LINC00847-201ENST00000501855 IFT140Q96RY7 1462 aa24.56■■□□□ 1.52
LINC00847-201ENST00000501855 GCC2Q8IWJ2 1684 aa24.56■■□□□ 1.52
LINC00847-201ENST00000501855 EPRSP07814 1512 aaKnown RBP24.56■■□□□ 1.52
LINC00847-201ENST00000501855 PPP1R15AO75807 674 aaPredicted RBP24.53■■□□□ 1.52
LINC00847-201ENST00000501855 AKNAQ7Z591 1439 aa24.48■■□□□ 1.51
LINC00847-201ENST00000501855 CDK13Q14004 1512 aaKnown RBP24.48■■□□□ 1.51
LINC00847-201ENST00000501855 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
LINC00847-201ENST00000501855 KIAA0556O60303 1618 aa24.46■■□□□ 1.51
LINC00847-201ENST00000501855 MIA2Q96PC5 1412 aa24.45■■□□□ 1.5
LINC00847-201ENST00000501855 KIAA0586Q9BVV6 1533 aa24.44■■□□□ 1.5
LINC00847-201ENST00000501855 TONSLQ96HA7 1378 aa24.43■■□□□ 1.5
LINC00847-201ENST00000501855 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
LINC00847-201ENST00000501855 DISP1Q96F81 1524 aa24.41■■□□□ 1.5
LINC00847-201ENST00000501855 KDM5BQ9UGL1 1544 aa24.4■■□□□ 1.5
LINC00847-201ENST00000501855 GRIN2AQ12879 1464 aa24.37■■□□□ 1.49
LINC00847-201ENST00000501855 RAPGEF6Q8TEU7 1601 aa24.37■■□□□ 1.49
LINC00847-201ENST00000501855 DDX10Q13206 875 aaKnown RBP24.36■■□□□ 1.49
LINC00847-201ENST00000501855 KDM6BO15054 1643 aa24.36■■□□□ 1.49
LINC00847-201ENST00000501855 DENND4BO75064 1496 aaPredicted RBP24.33■■□□□ 1.49
LINC00847-201ENST00000501855 NUP153P49790 1475 aaKnown RBP24.32■■□□□ 1.48
LINC00847-201ENST00000501855 RRP7BPQ9NSQ0 103 aa24.31■■□□□ 1.48
LINC00847-201ENST00000501855 DNMT1P26358 1616 aaKnown RBP24.3■■□□□ 1.48
LINC00847-201ENST00000501855 KCNH8Q96L42 1107 aa24.29■■□□□ 1.48
LINC00847-201ENST00000501855 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
LINC00847-201ENST00000501855 CHIC2Q9UKJ5 165 aa24.26■■□□□ 1.47
LINC00847-201ENST00000501855 ROCK1Q13464 1354 aa24.25■■□□□ 1.47
LINC00847-201ENST00000501855 DAPK1P53355 1430 aa24.25■■□□□ 1.47
LINC00847-201ENST00000501855 CEP170Q5SW79 1584 aa24.24■■□□□ 1.47
LINC00847-201ENST00000501855 HIRIP3Q9BW71 556 aaPredicted RBP24.24■■□□□ 1.47
LINC00847-201ENST00000501855 CCER2I3L3R5 266 aa24.21■■□□□ 1.47
LINC00847-201ENST00000501855 SUPT16HQ9Y5B9 1047 aaKnown RBP24.21■■□□□ 1.47
LINC00847-201ENST00000501855 ARID3CA6NKF2 412 aa24.2■■□□□ 1.46
LINC00847-201ENST00000501855 SYNJ2O15056 1496 aa24.2■■□□□ 1.46
LINC00847-201ENST00000501855 ABCC5O15440 1437 aa24.2■■□□□ 1.46
LINC00847-201ENST00000501855 ADCY10Q96PN6 1610 aa24.2■■□□□ 1.46
LINC00847-201ENST00000501855 ITSN2Q9NZM3 1697 aa24.19■■□□□ 1.46
LINC00847-201ENST00000501855 TRIM52Q96A61 297 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms