RNA–Protein interactions for RNA: ENST00000499666.6

LAMTOR3-202, Transcript of late endosomal/lysosomal adaptor, MAPK and MTOR activator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMTOR3, Length 4,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMTOR3-202ENST00000499666 NPM1P06748 294 aaKnown RBP eCLIP8.46□□□□□ -1.06
LAMTOR3-202ENST00000499666 KCNH8Q96L42 1107 aa8.45□□□□□ -1.06
LAMTOR3-202ENST00000499666 RRP7BPQ9NSQ0 103 aa8.45□□□□□ -1.06
LAMTOR3-202ENST00000499666 PELP1Q8IZL8 1130 aaKnown RBP8.43□□□□□ -1.06
LAMTOR3-202ENST00000499666 FHOD3Q2V2M9 1422 aa8.43□□□□□ -1.06
LAMTOR3-202ENST00000499666 TSPY4P0CV99 314 aa8.43□□□□□ -1.06
LAMTOR3-202ENST00000499666 TSPY10P0CW01 314 aa8.43□□□□□ -1.06
LAMTOR3-202ENST00000499666 CUX1P39880 1505 aa8.42□□□□□ -1.06
LAMTOR3-202ENST00000499666 CCNB3Q8WWL7 1395 aa8.42□□□□□ -1.06
LAMTOR3-202ENST00000499666 CFDP1Q9UEE9 299 aaPredicted RBP8.41□□□□□ -1.06
LAMTOR3-202ENST00000499666 GAPVD1Q14C86 1478 aa8.41□□□□□ -1.06
LAMTOR3-202ENST00000499666 TOP2BQ02880 1626 aa8.41□□□□□ -1.06
LAMTOR3-202ENST00000499666 TONSLQ96HA7 1378 aa8.4□□□□□ -1.06
LAMTOR3-202ENST00000499666 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.39□□□□□ -1.07
LAMTOR3-202ENST00000499666 FMN1Q68DA7 1419 aa8.39□□□□□ -1.07
LAMTOR3-202ENST00000499666 AQRO60306 1485 aaKnown RBP eCLIP8.39□□□□□ -1.074e-6■■■■■ 31
LAMTOR3-202ENST00000499666 TOPBP1Q92547 1522 aa8.38□□□□□ -1.07
LAMTOR3-202ENST00000499666 POLA1P09884 1462 aaPredicted RBP8.37□□□□□ -1.07
LAMTOR3-202ENST00000499666 JPH4Q96JJ6 628 aa8.37□□□□□ -1.07
LAMTOR3-202ENST00000499666 CARMIL2Q6F5E8 1435 aa8.36□□□□□ -1.07
LAMTOR3-202ENST00000499666 SLC4A1APQ9BWU0 796 aaKnown RBP8.35□□□□□ -1.07
LAMTOR3-202ENST00000499666 NEFLP07196 543 aa8.35□□□□□ -1.07
LAMTOR3-202ENST00000499666 KIF21BO75037 1637 aa8.34□□□□□ -1.07
LAMTOR3-202ENST00000499666 PRXQ9BXM0 1461 aa8.34□□□□□ -1.07
LAMTOR3-202ENST00000499666 ARHGAP35Q9NRY4 1499 aa8.34□□□□□ -1.07
LAMTOR3-202ENST00000499666 HIRIP3Q9BW71 556 aaPredicted RBP8.34□□□□□ -1.08
LAMTOR3-202ENST00000499666 ANP32CO43423 234 aa8.33□□□□□ -1.08
LAMTOR3-202ENST00000499666 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
LAMTOR3-202ENST00000499666 MRC2Q9UBG0 1479 aa8.32□□□□□ -1.08
LAMTOR3-202ENST00000499666 ERICH3Q5RHP9 1530 aa8.32□□□□□ -1.08
LAMTOR3-202ENST00000499666 DNMBPQ6XZF7 1577 aa8.32□□□□□ -1.08
LAMTOR3-202ENST00000499666 DDX10Q13206 875 aaKnown RBP8.31□□□□□ -1.08
LAMTOR3-202ENST00000499666 LAMC3Q9Y6N6 1575 aa8.31□□□□□ -1.08
LAMTOR3-202ENST00000499666 CHGAP10645 457 aaKnown RBP8.3□□□□□ -1.08
LAMTOR3-202ENST00000499666 KDM2AQ9Y2K7 1162 aa8.3□□□□□ -1.08
LAMTOR3-202ENST00000499666 ARAP1Q96P48 1450 aa8.3□□□□□ -1.08
LAMTOR3-202ENST00000499666 GRIN2BQ13224 1484 aa8.29□□□□□ -1.08
LAMTOR3-202ENST00000499666 SETD5Q9C0A6 1442 aa8.28□□□□□ -1.08
LAMTOR3-202ENST00000499666 RAB3GAP2Q9H2M9 1393 aa8.27□□□□□ -1.08
LAMTOR3-202ENST00000499666 ABCA10Q8WWZ4 1543 aa8.27□□□□□ -1.09
LAMTOR3-202ENST00000499666 URB2Q14146 1524 aaKnown RBP8.26□□□□□ -1.09
LAMTOR3-202ENST00000499666 CLSPNQ9HAW4 1339 aa8.26□□□□□ -1.09
LAMTOR3-202ENST00000499666 IFT140Q96RY7 1462 aa8.26□□□□□ -1.09
LAMTOR3-202ENST00000499666 RGL3Q3MIN7 710 aa8.25□□□□□ -1.09
LAMTOR3-202ENST00000499666 ESF1Q9H501 851 aaKnown RBP8.25□□□□□ -1.09
LAMTOR3-202ENST00000499666 BIVM-ERCC5R4GMW8 1640 aa8.24□□□□□ -1.09
LAMTOR3-202ENST00000499666 MIER1Q8N108 512 aa8.24□□□□□ -1.09
LAMTOR3-202ENST00000499666 PTPRGP23470 1445 aa8.24□□□□□ -1.09
LAMTOR3-202ENST00000499666 PLPPR3Q6T4P5 718 aa8.24□□□□□ -1.09
LAMTOR3-202ENST00000499666 FOXD1Q16676 465 aa8.23□□□□□ -1.09
LAMTOR3-202ENST00000499666 CCDC18Q5T9S5 1454 aa8.23□□□□□ -1.09
LAMTOR3-202ENST00000499666 BCANQ96GW7 911 aa8.23□□□□□ -1.09
LAMTOR3-202ENST00000499666 EIF4G2P78344 907 aaKnown RBP eCLIP8.22□□□□□ -1.09
LAMTOR3-202ENST00000499666 STAG3Q9UJ98 1225 aa8.22□□□□□ -1.09
LAMTOR3-202ENST00000499666 SNAPC4Q5SXM2 1469 aa8.22□□□□□ -1.09
LAMTOR3-202ENST00000499666 PHLDB1Q86UU1 1377 aa8.22□□□□□ -1.09
LAMTOR3-202ENST00000499666 HNRNPMP52272 730 aaKnown RBP eCLIP8.21□□□□□ -1.09
LAMTOR3-202ENST00000499666 GTF3C3Q9Y5Q9 886 aa8.21□□□□□ -1.1
LAMTOR3-202ENST00000499666 LRRC9Q6ZRR7 1453 aa8.21□□□□□ -1.1
LAMTOR3-202ENST00000499666 ACIN1Q9UKV3 1341 aaKnown RBP8.21□□□□□ -1.1
LAMTOR3-202ENST00000499666 CASKIN1Q8WXD9 1431 aa8.2□□□□□ -1.1
LAMTOR3-202ENST00000499666 SENP3Q9H4L4 574 aaPredicted RBP8.2□□□□□ -1.1
LAMTOR3-202ENST00000499666 EFCAB2Q5VUJ9 269 aa8.19□□□□□ -1.1
LAMTOR3-202ENST00000499666 ZNF608Q9ULD9 1512 aaPredicted RBP8.19□□□□□ -1.1
LAMTOR3-202ENST00000499666 MPHOSPH9Q99550 1183 aa8.19□□□□□ -1.1
LAMTOR3-202ENST00000499666 OSCARQ8IYS5 282 aa8.18□□□□□ -1.1
LAMTOR3-202ENST00000499666 PKD2Q13563 968 aa8.18□□□□□ -1.1
LAMTOR3-202ENST00000499666 DHX57Q6P158 1386 aaKnown RBP8.18□□□□□ -1.1
LAMTOR3-202ENST00000499666 ZNF644Q9H582 1327 aaPredicted RBP8.18□□□□□ -1.1
LAMTOR3-202ENST00000499666 PRDM2Q13029 1718 aa8.17□□□□□ -1.1
LAMTOR3-202ENST00000499666 ANKRD30AQ9BXX3 1397 aa8.17□□□□□ -1.1
LAMTOR3-202ENST00000499666 EFCAB5A4FU69 1503 aa8.16□□□□□ -1.1
LAMTOR3-202ENST00000499666 FGD6Q6ZV73 1430 aa8.16□□□□□ -1.1
LAMTOR3-202ENST00000499666 FYCO1Q9BQS8 1478 aa8.16□□□□□ -1.1
LAMTOR3-202ENST00000499666 PRG4Q92954 1404 aaPredicted RBP8.15□□□□□ -1.1
LAMTOR3-202ENST00000499666 NUP155O75694 1391 aa8.15□□□□□ -1.1
LAMTOR3-202ENST00000499666 TIMELESSQ9UNS1 1208 aa8.15□□□□□ -1.1
LAMTOR3-202ENST00000499666 MYOM3Q5VTT5 1437 aa8.15□□□□□ -1.1
LAMTOR3-202ENST00000499666 FAM9BQ8IZU0 186 aa8.15□□□□□ -1.11
LAMTOR3-202ENST00000499666 DCAF11Q8TEB1 546 aa8.14□□□□□ -1.11
LAMTOR3-202ENST00000499666 CARD11Q9BXL7 1154 aa8.14□□□□□ -1.11
LAMTOR3-202ENST00000499666 NCOA2Q15596 1464 aa8.14□□□□□ -1.11
LAMTOR3-202ENST00000499666 CYB5RLQ6IPT4 315 aa8.14□□□□□ -1.11
LAMTOR3-202ENST00000499666 CUL7Q14999 1698 aa8.14□□□□□ -1.11
LAMTOR3-202ENST00000499666 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
LAMTOR3-202ENST00000499666 GGT6Q6P531 493 aa8.13□□□□□ -1.11
LAMTOR3-202ENST00000499666 HNRNPUQ00839 825 aaKnown RBP eCLIP8.13□□□□□ -1.11
LAMTOR3-202ENST00000499666 TIAM1Q13009 1591 aa8.12□□□□□ -1.11
LAMTOR3-202ENST00000499666 ARID4BQ4LE39 1312 aaPredicted RBP8.12□□□□□ -1.11
LAMTOR3-202ENST00000499666 PPP1R15AO75807 674 aaPredicted RBP8.12□□□□□ -1.11
LAMTOR3-202ENST00000499666 RSPH4AQ5TD94 716 aa8.12□□□□□ -1.11
LAMTOR3-202ENST00000499666 RRBP1Q9P2E9 1410 aaKnown RBP8.12□□□□□ -1.11
LAMTOR3-202ENST00000499666 IQGAP2Q13576 1575 aa8.12□□□□□ -1.11
LAMTOR3-202ENST00000499666 SPAG9O60271 1321 aaKnown RBP8.11□□□□□ -1.11
LAMTOR3-202ENST00000499666 GRIN2AQ12879 1464 aa8.11□□□□□ -1.11
LAMTOR3-202ENST00000499666 MRS2Q9HD23 443 aa8.11□□□□□ -1.11
LAMTOR3-202ENST00000499666 KIF3BO15066 747 aa8.11□□□□□ -1.11
LAMTOR3-202ENST00000499666 L3MBTL2Q969R5 705 aa8.11□□□□□ -1.11
LAMTOR3-202ENST00000499666 SYNJ2O15056 1496 aa8.1□□□□□ -1.11
LAMTOR3-202ENST00000499666 MLECQ14165 292 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms