RNA–Protein interactions for RNA: ENST00000498820.5

RET-204, Transcript of ret proto-oncogene, humanhuman

TSL 3

Gene RET, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-204ENST00000498820 EHMT2Q96KQ7 1210 aa39.64■■■■□ 3.94
RET-204ENST00000498820 ARHGEF11O15085 1522 aa39.61■■■■□ 3.93
RET-204ENST00000498820 JPH4Q96JJ6 628 aa39.61■■■■□ 3.93
RET-204ENST00000498820 SHROOM2Q13796 1616 aa39.61■■■■□ 3.93
RET-204ENST00000498820 IQGAP2Q13576 1575 aa39.58■■■■□ 3.93
RET-204ENST00000498820 RIMBP3CA6NJZ7 1639 aa39.58■■■■□ 3.93
RET-204ENST00000498820 RIMBP3BA6NNM3 1639 aa39.58■■■■□ 3.93
RET-204ENST00000498820 RIMBP3Q9UFD9 1639 aa39.58■■■■□ 3.93
RET-204ENST00000498820 CTTNBP2Q8WZ74 1663 aa39.56■■■■□ 3.92
RET-204ENST00000498820 GOLGA3Q08378 1498 aa39.53■■■■□ 3.92
RET-204ENST00000498820 PRG4Q92954 1404 aaPredicted RBP39.5■■■■□ 3.91
RET-204ENST00000498820 ERCC6L2Q5T890 1561 aa39.49■■■■□ 3.91
RET-204ENST00000498820 UBTFP17480 764 aaKnown RBP39.44■■■■□ 3.9
RET-204ENST00000498820 UGGT2Q9NYU1 1516 aa39.37■■■■□ 3.89
RET-204ENST00000498820 ARAP1Q96P48 1450 aa39.35■■■■□ 3.89
RET-204ENST00000498820 CARMIL2Q6F5E8 1435 aa39.29■■■■□ 3.88
RET-204ENST00000498820 DISP1Q96F81 1524 aa39.29■■■■□ 3.88
RET-204ENST00000498820 CYB5RLQ6IPT4 315 aa39.27■■■■□ 3.88
RET-204ENST00000498820 RANGAP1P46060 587 aaPredicted RBP39.26■■■■□ 3.88
RET-204ENST00000498820 KIAA0556O60303 1618 aa39.2■■■■□ 3.87
RET-204ENST00000498820 LOC105371045A0A1W2PR82 267 aa39.16■■■■□ 3.86
RET-204ENST00000498820 TTBK1Q5TCY1 1321 aaPredicted RBP39.14■■■■□ 3.86
RET-204ENST00000498820 TNIKQ9UKE5 1360 aa39.14■■■■□ 3.86
RET-204ENST00000498820 P3H3Q8IVL6 736 aa39.11■■■■□ 3.85
RET-204ENST00000498820 SAMD9Q5K651 1589 aa39.09■■■■□ 3.85
RET-204ENST00000498820 PTPRGP23470 1445 aa39.08■■■■□ 3.85
RET-204ENST00000498820 EFCAB5A4FU69 1503 aa38.99■■■■□ 3.83
RET-204ENST00000498820 FHOD3Q2V2M9 1422 aa38.94■■■■□ 3.82
RET-204ENST00000498820 ARHGAP35Q9NRY4 1499 aa38.92■■■■□ 3.82
RET-204ENST00000498820 CLIP1P30622 1438 aa38.86■■■■□ 3.81
RET-204ENST00000498820 UACAQ9BZF9 1416 aa38.83■■■■□ 3.81
RET-204ENST00000498820 ADCY10Q96PN6 1610 aa38.82■■■■□ 3.81
RET-204ENST00000498820 CEP162Q5TB80 1403 aa38.8■■■■□ 3.8
RET-204ENST00000498820 PLB1Q6P1J6 1458 aa38.8■■■■□ 3.8
RET-204ENST00000498820 ABCC2Q92887 1545 aa38.74■■■■□ 3.79
RET-204ENST00000498820 UHRF1BP1LA0JNW5 1464 aa38.74■■■■□ 3.79
RET-204ENST00000498820 ABCA8O94911 1581 aa38.74■■■■□ 3.79
RET-204ENST00000498820 NPM1P06748 294 aaKnown RBP eCLIP38.65■■■■□ 3.78
RET-204ENST00000498820 FMN1Q68DA7 1419 aa38.63■■■■□ 3.78
RET-204ENST00000498820 RAPGEF6Q8TEU7 1601 aa38.63■■■■□ 3.77
RET-204ENST00000498820 KDM5BQ9UGL1 1544 aa38.56■■■■□ 3.76
RET-204ENST00000498820 ARID3CA6NKF2 412 aa38.55■■■■□ 3.76
RET-204ENST00000498820 NUP153P49790 1475 aaKnown RBP38.51■■■■□ 3.76
RET-204ENST00000498820 ZCCHC11Q5TAX3 1644 aaKnown RBP38.51■■■■□ 3.76
RET-204ENST00000498820 ATP1B4Q9UN42 357 aaPredicted RBP38.48■■■■□ 3.75
RET-204ENST00000498820 ATP10BO94823 1461 aa38.45■■■■□ 3.75
RET-204ENST00000498820 MAPKBP1O60336 1514 aa38.44■■■■□ 3.74
RET-204ENST00000498820 PCF11O94913 1555 aaKnown RBP38.43■■■■□ 3.74
RET-204ENST00000498820 HECW1Q76N89 1606 aa38.41■■■■□ 3.74
RET-204ENST00000498820 CASKIN1Q8WXD9 1431 aa38.4■■■■□ 3.74
RET-204ENST00000498820 ASXL2Q76L83 1435 aa38.38■■■■□ 3.74
RET-204ENST00000498820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.37■■■■□ 3.73
RET-204ENST00000498820 HNRNPUL2Q1KMD3 747 aaKnown RBP38.37■■■■□ 3.73
RET-204ENST00000498820 FYCO1Q9BQS8 1478 aa38.34■■■■□ 3.73
RET-204ENST00000498820 TRHP20396 242 aaPredicted RBP38.33■■■■□ 3.73
RET-204ENST00000498820 CDK13Q14004 1512 aaKnown RBP38.32■■■■□ 3.72
RET-204ENST00000498820 EPRSP07814 1512 aaKnown RBP38.31■■■■□ 3.72
RET-204ENST00000498820 VPS8Q8N3P4 1428 aa38.29■■■■□ 3.72
RET-204ENST00000498820 LRRIQ1Q96JM4 1722 aa38.25■■■■□ 3.71
RET-204ENST00000498820 WDR7Q9Y4E6 1490 aa38.25■■■■□ 3.71
RET-204ENST00000498820 ABCC10Q5T3U5 1492 aa38.22■■■■□ 3.71
RET-204ENST00000498820 DIP2BQ9P265 1576 aa38.19■■■■□ 3.7
RET-204ENST00000498820 CCDC18Q5T9S5 1454 aa38.18■■■■□ 3.7
RET-204ENST00000498820 FAM69CQ0P6D2 419 aa38.18■■■■□ 3.7
RET-204ENST00000498820 PLEKHD1A6NEE1 506 aa38.16■■■■□ 3.7
RET-204ENST00000498820 KCNH8Q96L42 1107 aa38.16■■■■□ 3.7
RET-204ENST00000498820 KIF13AQ9H1H9 1805 aa38.13■■■■□ 3.69
RET-204ENST00000498820 CDK11AQ9UQ88 783 aaPredicted RBP38.09■■■■□ 3.69
RET-204ENST00000498820 GLI2P10070 1586 aa38.04■■■■□ 3.68
RET-204ENST00000498820 MAGI3Q5TCQ9 1506 aa37.98■■■■□ 3.67
RET-204ENST00000498820 TROQ12816 1431 aaPredicted RBP37.98■■■■□ 3.67
RET-204ENST00000498820 CFAP43Q8NDM7 1665 aa37.93■■■■□ 3.66
RET-204ENST00000498820 TIAM1Q13009 1591 aa37.93■■■■□ 3.66
RET-204ENST00000498820 MAP3K4Q9Y6R4 1608 aa37.9■■■■□ 3.66
RET-204ENST00000498820 ABCA9Q8IUA7 1624 aa37.88■■■■□ 3.65
RET-204ENST00000498820 MTUS2Q5JR59 1369 aa37.88■■■■□ 3.65
RET-204ENST00000498820 KIF14Q15058 1648 aa37.87■■■■□ 3.65
RET-204ENST00000498820 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.87■■■■□ 3.65
RET-204ENST00000498820 CD109Q6YHK3 1445 aa37.86■■■■□ 3.65
RET-204ENST00000498820 TSPOAP1O95153 1857 aa37.86■■■■□ 3.65
RET-204ENST00000498820 APLP2Q06481 763 aa37.85■■■■□ 3.65
RET-204ENST00000498820 MAP3K1Q13233 1512 aa37.84■■■■□ 3.65
RET-204ENST00000498820 TTC37Q6PGP7 1564 aa37.82■■■■□ 3.65
RET-204ENST00000498820 EHBP1L1Q8N3D4 1523 aa37.8■■■■□ 3.64
RET-204ENST00000498820 PPRC1Q5VV67 1664 aaKnown RBP37.78■■■■□ 3.64
RET-204ENST00000498820 KANK4Q5T7N3 995 aaPredicted RBP37.77■■■■□ 3.64
RET-204ENST00000498820 LRRC9Q6ZRR7 1453 aa37.77■■■■□ 3.64
RET-204ENST00000498820 TEX14Q8IWB6 1497 aa37.68■■■■□ 3.62
RET-204ENST00000498820 PLCH2O75038 1416 aa37.63■■■■□ 3.61
RET-204ENST00000498820 MYO5CQ9NQX4 1742 aa37.62■■■■□ 3.61
RET-204ENST00000498820 SUPT6HQ7KZ85 1726 aaKnown RBP37.61■■■■□ 3.61
RET-204ENST00000498820 NCOA2Q15596 1464 aa37.59■■■■□ 3.61
RET-204ENST00000498820 CCNB3Q8WWL7 1395 aa37.57■■■■□ 3.61
RET-204ENST00000498820 FANCAO15360 1455 aa37.55■■■■□ 3.6
RET-204ENST00000498820 CDC42BPAQ5VT25 1732 aa37.54■■■■□ 3.6
RET-204ENST00000498820 GPATCH8Q9UKJ3 1502 aaKnown RBP37.54■■■■□ 3.6
RET-204ENST00000498820 ARHGAP5Q13017 1502 aa37.53■■■■□ 3.6
RET-204ENST00000498820 PREX2Q70Z35 1606 aa37.53■■■■□ 3.6
RET-204ENST00000498820 NEO1Q92859 1461 aa37.52■■■■□ 3.6
RET-204ENST00000498820 ARAP3Q8WWN8 1544 aa37.52■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms