RNA–Protein interactions for RNA: ENST00000498694.1

CTPS1-212, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 599 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-212ENST00000498694 HMGXB3Q12766 1538 aa7.53□□□□□ -1.2
CTPS1-212ENST00000498694 SMARCA2P51531 1590 aa7.52□□□□□ -1.21
CTPS1-212ENST00000498694 PRKAR2AP13861 404 aaKnown RBP7.52□□□□□ -1.21
CTPS1-212ENST00000498694 FXR2P51116 673 aaKnown RBP eCLIP7.51□□□□□ -1.21
CTPS1-212ENST00000498694 PIP4P2Q8N4L2 257 aa7.51□□□□□ -1.21
CTPS1-212ENST00000498694 ZBTB47Q9UFB7 747 aaPredicted RBP7.51□□□□□ -1.21
CTPS1-212ENST00000498694 ATAD2BQ9ULI0 1458 aa7.5□□□□□ -1.21
CTPS1-212ENST00000498694 RSF1Q96T23 1441 aaPredicted RBP7.5□□□□□ -1.21
CTPS1-212ENST00000498694 WIZO95785 1651 aa7.49□□□□□ -1.21
CTPS1-212ENST00000498694 SLC24A1O60721 1099 aa7.48□□□□□ -1.21
CTPS1-212ENST00000498694 SPOCK2Q92563 424 aa7.47□□□□□ -1.21
CTPS1-212ENST00000498694 TOP2AP11388 1531 aaKnown RBP7.47□□□□□ -1.21
CTPS1-212ENST00000498694 NCAPD3P42695 1498 aa7.46□□□□□ -1.22
CTPS1-212ENST00000498694 BAZ1BQ9UIG0 1483 aaKnown RBP7.44□□□□□ -1.22
CTPS1-212ENST00000498694 NPM1P06748 294 aaKnown RBP eCLIP7.44□□□□□ -1.22
CTPS1-212ENST00000498694 MNX1P50219 401 aaPredicted RBP7.44□□□□□ -1.22
CTPS1-212ENST00000498694 FARP1Q9Y4F1 1045 aaPredicted RBP7.44□□□□□ -1.22
CTPS1-212ENST00000498694 AMER1Q5JTC6 1135 aaPredicted RBP7.43□□□□□ -1.22
CTPS1-212ENST00000498694 SP7Q8TDD2 431 aaPredicted RBP7.43□□□□□ -1.22
CTPS1-212ENST00000498694 DNAJC5Q9H3Z4 198 aa7.41□□□□□ -1.22
CTPS1-212ENST00000498694 RTN4Q9NQC3 1192 aaKnown RBP7.41□□□□□ -1.22
CTPS1-212ENST00000498694 CIZ1Q9ULV3 898 aaPredicted RBP7.39□□□□□ -1.23
CTPS1-212ENST00000498694 HAX1O00165 279 aa7.38□□□□□ -1.23
CTPS1-212ENST00000498694 NUBP1P53384 320 aa7.38□□□□□ -1.23
CTPS1-212ENST00000498694 DCAF8Q5TAQ9 597 aa7.37□□□□□ -1.23
CTPS1-212ENST00000498694 RASEFQ8IZ41 740 aa7.36□□□□□ -1.23
CTPS1-212ENST00000498694 FAM212AQ96EL1 285 aa7.36□□□□□ -1.23
CTPS1-212ENST00000498694 TSPYL2Q9H2G4 693 aaPredicted RBP7.35□□□□□ -1.23
CTPS1-212ENST00000498694 GSE1Q14687 1217 aa7.33□□□□□ -1.24
CTPS1-212ENST00000498694 PAK3O75914 559 aaPredicted RBP7.32□□□□□ -1.24
CTPS1-212ENST00000498694 PRDM2Q13029 1718 aa7.32□□□□□ -1.24
CTPS1-212ENST00000498694 CD44P16070 742 aaKnown RBP7.31□□□□□ -1.24
CTPS1-212ENST00000498694 PKD2Q13563 968 aa7.31□□□□□ -1.24
CTPS1-212ENST00000498694 ECM2O94769 699 aaPredicted RBP7.3□□□□□ -1.24
CTPS1-212ENST00000498694 LAMC3Q9Y6N6 1575 aa7.29□□□□□ -1.24
CTPS1-212ENST00000498694 CCDC88BA6NC98 1476 aa7.29□□□□□ -1.24
CTPS1-212ENST00000498694 ZRANB1Q9UGI0 708 aa7.28□□□□□ -1.24
CTPS1-212ENST00000498694 C19orf67A6NJJ6 358 aa7.26□□□□□ -1.25
CTPS1-212ENST00000498694 PYGBP11216 843 aa7.26□□□□□ -1.25
CTPS1-212ENST00000498694 CFTRP13569 1480 aa7.25□□□□□ -1.25
CTPS1-212ENST00000498694 TRIM41Q8WV44 630 aa7.25□□□□□ -1.25
CTPS1-212ENST00000498694 EVX2Q03828 476 aa7.24□□□□□ -1.25
CTPS1-212ENST00000498694 NESP48681 1621 aa7.23□□□□□ -1.25
CTPS1-212ENST00000498694 CCDC61Q9Y6R9 512 aa7.23□□□□□ -1.25
CTPS1-212ENST00000498694 KIF21AQ7Z4S6 1674 aa7.22□□□□□ -1.25
CTPS1-212ENST00000498694 SUPT5HO00267 1087 aaKnown RBP7.22□□□□□ -1.25
CTPS1-212ENST00000498694 CUX2O14529 1486 aa7.22□□□□□ -1.25
CTPS1-212ENST00000498694 THOC2Q8NI27 1593 aaKnown RBP7.21□□□□□ -1.25
CTPS1-212ENST00000498694 RGL2O15211 777 aa7.21□□□□□ -1.26
CTPS1-212ENST00000498694 PHF12Q96QT6 1004 aa7.21□□□□□ -1.26
CTPS1-212ENST00000498694 CADPSQ9ULU8 1353 aa7.2□□□□□ -1.26
CTPS1-212ENST00000498694 CHRM1P11229 460 aaPredicted RBP7.18□□□□□ -1.26
CTPS1-212ENST00000498694 ZNF579Q8NAF0 562 aaKnown RBP7.18□□□□□ -1.26
CTPS1-212ENST00000498694 KIF12Q96FN5 646 aa7.17□□□□□ -1.26
CTPS1-212ENST00000498694 PCDHB13Q9Y5F0 798 aa7.17□□□□□ -1.26
CTPS1-212ENST00000498694 FANCD2Q9BXW9 1451 aa7.17□□□□□ -1.26
CTPS1-212ENST00000498694 CEP164Q9UPV0 1460 aa7.17□□□□□ -1.26
CTPS1-212ENST00000498694 RIOK3O14730 519 aaKnown RBP7.16□□□□□ -1.26
CTPS1-212ENST00000498694 MAP3K13O43283 966 aa7.16□□□□□ -1.26
CTPS1-212ENST00000498694 RNF25Q96BH1 459 aaPredicted RBP7.16□□□□□ -1.26
CTPS1-212ENST00000498694 PCDHB8Q9UN66 801 aa7.15□□□□□ -1.26
CTPS1-212ENST00000498694 PDS5BQ9NTI5 1447 aa7.15□□□□□ -1.27
CTPS1-212ENST00000498694 WDR62O43379 1518 aa7.15□□□□□ -1.27
CTPS1-212ENST00000498694 ZNF467Q7Z7K2 595 aaPredicted RBP7.14□□□□□ -1.27
CTPS1-212ENST00000498694 BIVM-ERCC5R4GMW8 1640 aa7.13□□□□□ -1.27
CTPS1-212ENST00000498694 ERCC6Q03468 1493 aa7.13□□□□□ -1.27
CTPS1-212ENST00000498694 MRC2Q9UBG0 1479 aa7.13□□□□□ -1.27
CTPS1-212ENST00000498694 DNMBPQ6XZF7 1577 aa7.12□□□□□ -1.27
CTPS1-212ENST00000498694 IFNL1Q8IU54 200 aa7.12□□□□□ -1.27
CTPS1-212ENST00000498694 MS4A3Q96HJ5 214 aa7.12□□□□□ -1.27
CTPS1-212ENST00000498694 TAOK2Q9UL54 1235 aa7.12□□□□□ -1.27
CTPS1-212ENST00000498694 URB2Q14146 1524 aaKnown RBP7.11□□□□□ -1.27
CTPS1-212ENST00000498694 VGFO15240 615 aaPredicted RBP7.11□□□□□ -1.27
CTPS1-212ENST00000498694 GABBR2O75899 941 aa7.11□□□□□ -1.27
CTPS1-212ENST00000498694 SGIP1Q9BQI5 828 aa7.11□□□□□ -1.27
CTPS1-212ENST00000498694 SYNJ1O43426 1573 aa7.11□□□□□ -1.27
CTPS1-212ENST00000498694 CUX1P39880 1505 aa7.11□□□□□ -1.27
CTPS1-212ENST00000498694 TOP2BQ02880 1626 aa7.1□□□□□ -1.27
CTPS1-212ENST00000498694 ABCC8Q09428 1581 aa7.1□□□□□ -1.27
CTPS1-212ENST00000498694 WDR97A6NE52 1622 aa7.09□□□□□ -1.27
CTPS1-212ENST00000498694 GALR2O43603 387 aaPredicted RBP7.09□□□□□ -1.27
CTPS1-212ENST00000498694 CHGAP10645 457 aaKnown RBP7.09□□□□□ -1.27
CTPS1-212ENST00000498694 CLCN6P51797 869 aa7.09□□□□□ -1.27
CTPS1-212ENST00000498694 TOPBP1Q92547 1522 aa7.09□□□□□ -1.27
CTPS1-212ENST00000498694 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.08□□□□□ -1.28
CTPS1-212ENST00000498694 PSEN1P49768 467 aa7.08□□□□□ -1.28
CTPS1-212ENST00000498694 PDAP1Q13442 181 aaKnown RBP7.08□□□□□ -1.28
CTPS1-212ENST00000498694 ZFP91Q96JP5 570 aaPredicted RBP7.08□□□□□ -1.28
CTPS1-212ENST00000498694 STK25O00506 426 aa7.07□□□□□ -1.28
CTPS1-212ENST00000498694 TRPC6Q9Y210 931 aa7.06□□□□□ -1.28
CTPS1-212ENST00000498694 STK24Q9Y6E0 443 aa7.06□□□□□ -1.28
CTPS1-212ENST00000498694 WRNQ14191 1432 aaPredicted RBP eCLIP7.06□□□□□ -1.28
CTPS1-212ENST00000498694 BCL11BQ9C0K0 894 aaPredicted RBP7.05□□□□□ -1.28
CTPS1-212ENST00000498694 POLA1P09884 1462 aaPredicted RBP7.04□□□□□ -1.28
CTPS1-212ENST00000498694 TMEM106CQ9BVX2 250 aa7.04□□□□□ -1.28
CTPS1-212ENST00000498694 TARBP1Q13395 1621 aaKnown RBP7.04□□□□□ -1.28
CTPS1-212ENST00000498694 FGD5Q6ZNL6 1462 aa7.04□□□□□ -1.28
CTPS1-212ENST00000498694 HS6ST3Q8IZP7 471 aa7.03□□□□□ -1.28
CTPS1-212ENST00000498694 ABCA5Q8WWZ7 1642 aa7.01□□□□□ -1.29
CTPS1-212ENST00000498694 EIF4G3O43432 1585 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms