RNA–Protein interactions for RNA: ENST00000498366.5

HDAC10-221, Transcript of histone deacetylase 10, humanhuman

TSL 5

Gene HDAC10, Length 2,153 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-221ENST00000498366 GRIN2AQ12879 1464 aa29.76■■■□□ 2.35
HDAC10-221ENST00000498366 CTTNBP2Q8WZ74 1663 aa29.73■■■□□ 2.35
HDAC10-221ENST00000498366 CLIP1P30622 1438 aa29.69■■■□□ 2.34
HDAC10-221ENST00000498366 CHD1O14646 1710 aa29.64■■■□□ 2.33
HDAC10-221ENST00000498366 CEP170Q5SW79 1584 aa29.6■■■□□ 2.33
HDAC10-221ENST00000498366 IQGAP2Q13576 1575 aa29.55■■■□□ 2.32
HDAC10-221ENST00000498366 NUP160Q12769 1436 aa29.55■■■□□ 2.32
HDAC10-221ENST00000498366 KIAA0586Q9BVV6 1533 aa29.53■■■□□ 2.32
HDAC10-221ENST00000498366 ARHGAP35Q9NRY4 1499 aa29.53■■■□□ 2.32
HDAC10-221ENST00000498366 ARAP1Q96P48 1450 aa29.46■■■□□ 2.31
HDAC10-221ENST00000498366 P3H3Q8IVL6 736 aa29.45■■■□□ 2.3
HDAC10-221ENST00000498366 EFCAB5A4FU69 1503 aa29.41■■■□□ 2.3
HDAC10-221ENST00000498366 SAMD9Q5K651 1589 aa29.39■■■□□ 2.3
HDAC10-221ENST00000498366 UGGT2Q9NYU1 1516 aa29.38■■■□□ 2.29
HDAC10-221ENST00000498366 FHOD3Q2V2M9 1422 aa29.36■■■□□ 2.29
HDAC10-221ENST00000498366 VPS8Q8N3P4 1428 aa29.35■■■□□ 2.29
HDAC10-221ENST00000498366 JPH4Q96JJ6 628 aa29.33■■■□□ 2.29
HDAC10-221ENST00000498366 DISP1Q96F81 1524 aa29.28■■■□□ 2.28
HDAC10-221ENST00000498366 CLASP1Q7Z460 1538 aa29.26■■■□□ 2.27
HDAC10-221ENST00000498366 KIAA0556O60303 1618 aa29.25■■■□□ 2.27
HDAC10-221ENST00000498366 SHROOM2Q13796 1616 aa29.2■■■□□ 2.26
HDAC10-221ENST00000498366 OSCARQ8IYS5 282 aa29.19■■■□□ 2.26
HDAC10-221ENST00000498366 PRG4Q92954 1404 aaPredicted RBP29.18■■■□□ 2.26
HDAC10-221ENST00000498366 CARMIL2Q6F5E8 1435 aa29.17■■■□□ 2.26
HDAC10-221ENST00000498366 PELP1Q8IZL8 1130 aaKnown RBP29.16■■■□□ 2.26
HDAC10-221ENST00000498366 TTBK1Q5TCY1 1321 aaPredicted RBP29.16■■■□□ 2.26
HDAC10-221ENST00000498366 FMN1Q68DA7 1419 aa29.16■■■□□ 2.26
HDAC10-221ENST00000498366 PPARGC1BQ86YN6 1023 aaKnown RBP29.13■■■□□ 2.25
HDAC10-221ENST00000498366 PCF11O94913 1555 aaKnown RBP29.12■■■□□ 2.25
HDAC10-221ENST00000498366 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
HDAC10-221ENST00000498366 ATP1B4Q9UN42 357 aaPredicted RBP29.07■■■□□ 2.24
HDAC10-221ENST00000498366 APLP2Q06481 763 aa29.05■■■□□ 2.24
HDAC10-221ENST00000498366 CASKIN1Q8WXD9 1431 aa29.05■■■□□ 2.24
HDAC10-221ENST00000498366 FYCO1Q9BQS8 1478 aa29.03■■■□□ 2.24
HDAC10-221ENST00000498366 PTPRGP23470 1445 aa28.94■■■□□ 2.22
HDAC10-221ENST00000498366 PLB1Q6P1J6 1458 aa28.94■■■□□ 2.22
HDAC10-221ENST00000498366 LRRIQ1Q96JM4 1722 aa28.93■■■□□ 2.22
HDAC10-221ENST00000498366 RAPGEF6Q8TEU7 1601 aa28.92■■■□□ 2.22
HDAC10-221ENST00000498366 TIAM1Q13009 1591 aa28.91■■■□□ 2.22
HDAC10-221ENST00000498366 HECW1Q76N89 1606 aa28.9■■■□□ 2.22
HDAC10-221ENST00000498366 KANK4Q5T7N3 995 aaPredicted RBP28.89■■■□□ 2.22
HDAC10-221ENST00000498366 ARID3CA6NKF2 412 aa28.88■■■□□ 2.21
HDAC10-221ENST00000498366 MAP3K1Q13233 1512 aa28.87■■■□□ 2.21
HDAC10-221ENST00000498366 CFAP43Q8NDM7 1665 aa28.87■■■□□ 2.21
HDAC10-221ENST00000498366 ABCA8O94911 1581 aa28.85■■■□□ 2.21
HDAC10-221ENST00000498366 NUP153P49790 1475 aaKnown RBP28.85■■■□□ 2.21
HDAC10-221ENST00000498366 EPRSP07814 1512 aaKnown RBP28.83■■■□□ 2.21
HDAC10-221ENST00000498366 PCGF6Q9BYE7 350 aa28.82■■■□□ 2.2
HDAC10-221ENST00000498366 CDK13Q14004 1512 aaKnown RBP28.8■■■□□ 2.2
HDAC10-221ENST00000498366 CCDC18Q5T9S5 1454 aa28.79■■■□□ 2.2
HDAC10-221ENST00000498366 LRRC9Q6ZRR7 1453 aa28.78■■■□□ 2.2
HDAC10-221ENST00000498366 UACAQ9BZF9 1416 aa28.77■■■□□ 2.2
HDAC10-221ENST00000498366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.72■■■□□ 2.19
HDAC10-221ENST00000498366 HNRNPUL2Q1KMD3 747 aaKnown RBP28.72■■■□□ 2.19
HDAC10-221ENST00000498366 ARHGEF11O15085 1522 aa28.72■■■□□ 2.19
HDAC10-221ENST00000498366 ABCC2Q92887 1545 aa28.69■■■□□ 2.18
HDAC10-221ENST00000498366 MTUS2Q5JR59 1369 aa28.68■■■□□ 2.18
HDAC10-221ENST00000498366 TRIM26Q12899 539 aaPredicted RBP28.68■■■□□ 2.18
HDAC10-221ENST00000498366 MAGI3Q5TCQ9 1506 aa28.68■■■□□ 2.18
HDAC10-221ENST00000498366 ATP10BO94823 1461 aa28.67■■■□□ 2.18
HDAC10-221ENST00000498366 UHRF1BP1LA0JNW5 1464 aa28.61■■■□□ 2.17
HDAC10-221ENST00000498366 RIMBP3CA6NJZ7 1639 aa28.61■■■□□ 2.17
HDAC10-221ENST00000498366 RIMBP3BA6NNM3 1639 aa28.61■■■□□ 2.17
HDAC10-221ENST00000498366 RIMBP3Q9UFD9 1639 aa28.61■■■□□ 2.17
HDAC10-221ENST00000498366 EHBP1L1Q8N3D4 1523 aa28.61■■■□□ 2.17
HDAC10-221ENST00000498366 ADCY10Q96PN6 1610 aa28.59■■■□□ 2.17
HDAC10-221ENST00000498366 CDK11AQ9UQ88 783 aaPredicted RBP28.58■■■□□ 2.17
HDAC10-221ENST00000498366 SUPT6HQ7KZ85 1726 aaKnown RBP28.53■■■□□ 2.16
HDAC10-221ENST00000498366 ZCCHC11Q5TAX3 1644 aaKnown RBP28.52■■■□□ 2.16
HDAC10-221ENST00000498366 KDM5BQ9UGL1 1544 aa28.52■■■□□ 2.16
HDAC10-221ENST00000498366 PHLDB1Q86UU1 1377 aa28.52■■■□□ 2.16
HDAC10-221ENST00000498366 NCOA2Q15596 1464 aa28.51■■■□□ 2.15
HDAC10-221ENST00000498366 PLEKHD1A6NEE1 506 aa28.51■■■□□ 2.15
HDAC10-221ENST00000498366 TROQ12816 1431 aaPredicted RBP28.5■■■□□ 2.15
HDAC10-221ENST00000498366 CYB5RLQ6IPT4 315 aa28.5■■■□□ 2.15
HDAC10-221ENST00000498366 KIF14Q15058 1648 aa28.43■■■□□ 2.14
HDAC10-221ENST00000498366 RRBP1Q9P2E9 1410 aaKnown RBP28.4■■■□□ 2.14
HDAC10-221ENST00000498366 MYOM3Q5VTT5 1437 aa28.36■■■□□ 2.13
HDAC10-221ENST00000498366 CCNB3Q8WWL7 1395 aa28.35■■■□□ 2.13
HDAC10-221ENST00000498366 NPM1P06748 294 aaKnown RBP eCLIP28.35■■■□□ 2.13
HDAC10-221ENST00000498366 KCNH8Q96L42 1107 aa28.33■■■□□ 2.12
HDAC10-221ENST00000498366 FGD6Q6ZV73 1430 aa28.32■■■□□ 2.12
HDAC10-221ENST00000498366 ABCC10Q5T3U5 1492 aa28.29■■■□□ 2.12
HDAC10-221ENST00000498366 ASXL2Q76L83 1435 aa28.28■■■□□ 2.12
HDAC10-221ENST00000498366 WDR7Q9Y4E6 1490 aa28.28■■■□□ 2.12
HDAC10-221ENST00000498366 FAM50AQ14320 339 aaKnown RBP28.27■■■□□ 2.12
HDAC10-221ENST00000498366 SCAF1Q9H7N4 1312 aaKnown RBP28.24■■■□□ 2.11
HDAC10-221ENST00000498366 GPATCH8Q9UKJ3 1502 aaKnown RBP28.24■■■□□ 2.11
HDAC10-221ENST00000498366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.24■■■□□ 2.111e-6■□□□□ 10.3
HDAC10-221ENST00000498366 TTC37Q6PGP7 1564 aa28.23■■■□□ 2.11
HDAC10-221ENST00000498366 CDC42BPAQ5VT25 1732 aa28.22■■■□□ 2.11
HDAC10-221ENST00000498366 PTPN23Q9H3S7 1636 aa28.21■■■□□ 2.11
HDAC10-221ENST00000498366 ITSN2Q9NZM3 1697 aa28.21■■■□□ 2.11
HDAC10-221ENST00000498366 MIA2Q96PC5 1412 aa28.2■■■□□ 2.11
HDAC10-221ENST00000498366 ITGAEP38570 1179 aa28.19■■■□□ 2.1
HDAC10-221ENST00000498366 CFDP1Q9UEE9 299 aaPredicted RBP28.18■■■□□ 2.1
HDAC10-221ENST00000498366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.15■■■□□ 2.1
HDAC10-221ENST00000498366 ZNF644Q9H582 1327 aaPredicted RBP28.14■■■□□ 2.1
HDAC10-221ENST00000498366 TCOF1Q13428 1488 aaKnown RBP28.13■■■□□ 2.09
HDAC10-221ENST00000498366 MYT1Q01538 1121 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms