RNA–Protein interactions for RNA: ENST00000498027.5

CAPN2-212, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 1,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-212ENST00000498027 SYNJ2O15056 1496 aa24.45■■□□□ 1.5
CAPN2-212ENST00000498027 GRIN2AQ12879 1464 aa24.4■■□□□ 1.5
CAPN2-212ENST00000498027 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
CAPN2-212ENST00000498027 CTTNBP2Q8WZ74 1663 aa24.38■■□□□ 1.49
CAPN2-212ENST00000498027 MSH5O43196 834 aa24.32■■□□□ 1.48
CAPN2-212ENST00000498027 RANGAP1P46060 587 aaPredicted RBP24.31■■□□□ 1.48
CAPN2-212ENST00000498027 ARHGAP35Q9NRY4 1499 aa24.31■■□□□ 1.48
CAPN2-212ENST00000498027 EFCAB5A4FU69 1503 aa24.3■■□□□ 1.48
CAPN2-212ENST00000498027 KIAA0586Q9BVV6 1533 aa24.29■■□□□ 1.48
CAPN2-212ENST00000498027 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
CAPN2-212ENST00000498027 POTEDQ86YR6 584 aa24.27■■□□□ 1.48
CAPN2-212ENST00000498027 NUP160Q12769 1436 aa24.26■■□□□ 1.47
CAPN2-212ENST00000498027 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
CAPN2-212ENST00000498027 IQGAP2Q13576 1575 aa24.26■■□□□ 1.47
CAPN2-212ENST00000498027 FBLN2P98095 1184 aa24.26■■□□□ 1.47
CAPN2-212ENST00000498027 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
CAPN2-212ENST00000498027 CEP170Q5SW79 1584 aa24.2■■□□□ 1.46
CAPN2-212ENST00000498027 UGGT2Q9NYU1 1516 aa24.18■■□□□ 1.46
CAPN2-212ENST00000498027 SAMD9Q5K651 1589 aa24.18■■□□□ 1.46
CAPN2-212ENST00000498027 CHD1O14646 1710 aa24.11■■□□□ 1.45
CAPN2-212ENST00000498027 FHOD3Q2V2M9 1422 aa24.1■■□□□ 1.45
CAPN2-212ENST00000498027 PIAS4Q8N2W9 510 aaPredicted RBP24.1■■□□□ 1.45
CAPN2-212ENST00000498027 FMN1Q68DA7 1419 aa24.09■■□□□ 1.45
CAPN2-212ENST00000498027 P3H3Q8IVL6 736 aa24.07■■□□□ 1.44
CAPN2-212ENST00000498027 APLP2Q06481 763 aa24.06■■□□□ 1.44
CAPN2-212ENST00000498027 JPH4Q96JJ6 628 aa24.05■■□□□ 1.44
CAPN2-212ENST00000498027 DISP1Q96F81 1524 aa24.02■■□□□ 1.44
CAPN2-212ENST00000498027 CARMIL2Q6F5E8 1435 aa24.02■■□□□ 1.44
CAPN2-212ENST00000498027 KIAA0556O60303 1618 aa24■■□□□ 1.43
CAPN2-212ENST00000498027 CASKIN1Q8WXD9 1431 aa23.99■■□□□ 1.43
CAPN2-212ENST00000498027 FYCO1Q9BQS8 1478 aa23.98■■□□□ 1.43
CAPN2-212ENST00000498027 PPP6R1Q9UPN7 881 aa23.96■■□□□ 1.43
CAPN2-212ENST00000498027 MAP3K1Q13233 1512 aa23.96■■□□□ 1.43
CAPN2-212ENST00000498027 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
CAPN2-212ENST00000498027 PCF11O94913 1555 aaKnown RBP23.92■■□□□ 1.42
CAPN2-212ENST00000498027 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
CAPN2-212ENST00000498027 TRIM26Q12899 539 aaPredicted RBP23.9■■□□□ 1.42
CAPN2-212ENST00000498027 PRG4Q92954 1404 aaPredicted RBP23.9■■□□□ 1.42
CAPN2-212ENST00000498027 ADRA2BP18089 450 aa23.85■■□□□ 1.41
CAPN2-212ENST00000498027 PPARGC1BQ86YN6 1023 aaKnown RBP23.85■■□□□ 1.41
CAPN2-212ENST00000498027 TIAM1Q13009 1591 aa23.84■■□□□ 1.41
CAPN2-212ENST00000498027 OSCARQ8IYS5 282 aa23.84■■□□□ 1.41
CAPN2-212ENST00000498027 ATP1B4Q9UN42 357 aaPredicted RBP23.82■■□□□ 1.4
CAPN2-212ENST00000498027 HECW1Q76N89 1606 aa23.81■■□□□ 1.4
CAPN2-212ENST00000498027 CCDC18Q5T9S5 1454 aa23.79■■□□□ 1.4
CAPN2-212ENST00000498027 CFAP43Q8NDM7 1665 aa23.78■■□□□ 1.4
CAPN2-212ENST00000498027 KANK4Q5T7N3 995 aaPredicted RBP23.76■■□□□ 1.39
CAPN2-212ENST00000498027 PTPRGP23470 1445 aa23.76■■□□□ 1.39
CAPN2-212ENST00000498027 LRRC9Q6ZRR7 1453 aa23.75■■□□□ 1.39
CAPN2-212ENST00000498027 RAPGEF6Q8TEU7 1601 aa23.74■■□□□ 1.39
CAPN2-212ENST00000498027 PCGF6Q9BYE7 350 aa23.72■■□□□ 1.39
CAPN2-212ENST00000498027 EPRSP07814 1512 aaKnown RBP23.71■■□□□ 1.39
CAPN2-212ENST00000498027 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.38
CAPN2-212ENST00000498027 ABCA8O94911 1581 aa23.69■■□□□ 1.38
CAPN2-212ENST00000498027 NUP153P49790 1475 aaKnown RBP23.68■■□□□ 1.38
CAPN2-212ENST00000498027 PLB1Q6P1J6 1458 aa23.68■■□□□ 1.38
CAPN2-212ENST00000498027 ERCC6L2Q5T890 1561 aa23.66■■□□□ 1.38
CAPN2-212ENST00000498027 MTUS2Q5JR59 1369 aa23.64■■□□□ 1.37
CAPN2-212ENST00000498027 LRRIQ1Q96JM4 1722 aa23.63■■□□□ 1.37
CAPN2-212ENST00000498027 UACAQ9BZF9 1416 aa23.62■■□□□ 1.37
CAPN2-212ENST00000498027 EHBP1L1Q8N3D4 1523 aa23.62■■□□□ 1.37
CAPN2-212ENST00000498027 CDK11AQ9UQ88 783 aaPredicted RBP23.61■■□□□ 1.37
CAPN2-212ENST00000498027 CDK13Q14004 1512 aaKnown RBP23.59■■□□□ 1.37
CAPN2-212ENST00000498027 UHRF1BP1LA0JNW5 1464 aa23.55■■□□□ 1.36
CAPN2-212ENST00000498027 ABCC2Q92887 1545 aa23.54■■□□□ 1.36
CAPN2-212ENST00000498027 RRBP1Q9P2E9 1410 aaKnown RBP23.53■■□□□ 1.36
CAPN2-212ENST00000498027 ATP10BO94823 1461 aa23.53■■□□□ 1.36
CAPN2-212ENST00000498027 MAGI3Q5TCQ9 1506 aa23.52■■□□□ 1.36
CAPN2-212ENST00000498027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.51■■□□□ 1.35
CAPN2-212ENST00000498027 HNRNPUL2Q1KMD3 747 aaKnown RBP23.51■■□□□ 1.35
CAPN2-212ENST00000498027 ARID3CA6NKF2 412 aa23.5■■□□□ 1.35
CAPN2-212ENST00000498027 SUPT6HQ7KZ85 1726 aaKnown RBP23.49■■□□□ 1.35
CAPN2-212ENST00000498027 TROQ12816 1431 aaPredicted RBP23.49■■□□□ 1.35
CAPN2-212ENST00000498027 PHLDB1Q86UU1 1377 aa23.49■■□□□ 1.35
CAPN2-212ENST00000498027 NCOA2Q15596 1464 aa23.48■■□□□ 1.35
CAPN2-212ENST00000498027 ARHGEF11O15085 1522 aa23.47■■□□□ 1.35
CAPN2-212ENST00000498027 CCNB3Q8WWL7 1395 aa23.46■■□□□ 1.35
CAPN2-212ENST00000498027 PLEKHD1A6NEE1 506 aa23.46■■□□□ 1.35
CAPN2-212ENST00000498027 KDM5BQ9UGL1 1544 aa23.41■■□□□ 1.34
CAPN2-212ENST00000498027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.4■■□□□ 1.34
CAPN2-212ENST00000498027 MYOM3Q5VTT5 1437 aa23.4■■□□□ 1.34
CAPN2-212ENST00000498027 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
CAPN2-212ENST00000498027 ADCY10Q96PN6 1610 aa23.37■■□□□ 1.33
CAPN2-212ENST00000498027 MIA2Q96PC5 1412 aa23.34■■□□□ 1.33
CAPN2-212ENST00000498027 KIF14Q15058 1648 aa23.31■■□□□ 1.32
CAPN2-212ENST00000498027 ZCCHC11Q5TAX3 1644 aaKnown RBP23.31■■□□□ 1.32
CAPN2-212ENST00000498027 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
CAPN2-212ENST00000498027 TCOF1Q13428 1488 aaKnown RBP23.26■■□□□ 1.31
CAPN2-212ENST00000498027 ABCC10Q5T3U5 1492 aa23.26■■□□□ 1.31
CAPN2-212ENST00000498027 NPM1P06748 294 aaKnown RBP eCLIP23.25■■□□□ 1.31
CAPN2-212ENST00000498027 GPATCH8Q9UKJ3 1502 aaKnown RBP23.24■■□□□ 1.31
CAPN2-212ENST00000498027 RIMBP3CA6NJZ7 1639 aa23.24■■□□□ 1.31
CAPN2-212ENST00000498027 RIMBP3BA6NNM3 1639 aa23.24■■□□□ 1.31
CAPN2-212ENST00000498027 RIMBP3Q9UFD9 1639 aa23.24■■□□□ 1.31
CAPN2-212ENST00000498027 PTPN23Q9H3S7 1636 aa23.23■■□□□ 1.31
CAPN2-212ENST00000498027 ITSN2Q9NZM3 1697 aa23.22■■□□□ 1.31
CAPN2-212ENST00000498027 WDR7Q9Y4E6 1490 aa23.19■■□□□ 1.3
CAPN2-212ENST00000498027 CFDP1Q9UEE9 299 aaPredicted RBP23.19■■□□□ 1.3
CAPN2-212ENST00000498027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.14■■□□□ 1.3
CAPN2-212ENST00000498027 ASXL2Q76L83 1435 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms