RNA–Protein interactions for RNA: ENST00000497845.1

POLR2B-211, Transcript of RNA polymerase II subunit B, humanhuman

TSL 4

Gene POLR2B, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-211ENST00000497845 CADPSQ9ULU8 1353 aa12.29□□□□□ -0.44
POLR2B-211ENST00000497845 POTEMA6NI47 508 aa12.28□□□□□ -0.44
POLR2B-211ENST00000497845 SMARCA4P51532 1647 aa12.24□□□□□ -0.45
POLR2B-211ENST00000497845 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
POLR2B-211ENST00000497845 POTEGQ6S5H5 508 aa12.21□□□□□ -0.45
POLR2B-211ENST00000497845 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
POLR2B-211ENST00000497845 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
POLR2B-211ENST00000497845 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.46
POLR2B-211ENST00000497845 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
POLR2B-211ENST00000497845 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
POLR2B-211ENST00000497845 OTUD5Q96G74 571 aa12.13□□□□□ -0.47
POLR2B-211ENST00000497845 SPDYE1Q8NFV5 336 aaPredicted RBP12.12□□□□□ -0.47
POLR2B-211ENST00000497845 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
POLR2B-211ENST00000497845 PEG3Q9GZU2 1588 aa12.11□□□□□ -0.47
POLR2B-211ENST00000497845 KDM4FA0A1W2PPD8 638 aa12.11□□□□□ -0.47
POLR2B-211ENST00000497845 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
POLR2B-211ENST00000497845 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
POLR2B-211ENST00000497845 KCNA4P22459 653 aa12.08□□□□□ -0.48
POLR2B-211ENST00000497845 FBLN2P98095 1184 aa12.06□□□□□ -0.48
POLR2B-211ENST00000497845 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
POLR2B-211ENST00000497845 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
POLR2B-211ENST00000497845 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
POLR2B-211ENST00000497845 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
POLR2B-211ENST00000497845 IFT140Q96RY7 1462 aa12.02□□□□□ -0.48
POLR2B-211ENST00000497845 CHD1O14646 1710 aa12.02□□□□□ -0.49
POLR2B-211ENST00000497845 FBXO41Q8TF61 875 aa12.01□□□□□ -0.49
POLR2B-211ENST00000497845 LMTK3Q96Q04 1460 aa12□□□□□ -0.49
POLR2B-211ENST00000497845 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
POLR2B-211ENST00000497845 CLCN6P51797 869 aa11.99□□□□□ -0.49
POLR2B-211ENST00000497845 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.49
POLR2B-211ENST00000497845 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
POLR2B-211ENST00000497845 SOCS7O14512 581 aa11.94□□□□□ -0.5
POLR2B-211ENST00000497845 ERCC6L2Q5T890 1561 aa11.93□□□□□ -0.5
POLR2B-211ENST00000497845 CFTRP13569 1480 aa11.93□□□□□ -0.5
POLR2B-211ENST00000497845 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
POLR2B-211ENST00000497845 AQRO60306 1485 aaKnown RBP eCLIP11.91□□□□□ -0.52e-6■■■■□ 23.4
POLR2B-211ENST00000497845 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
POLR2B-211ENST00000497845 GAPVD1Q14C86 1478 aa11.89□□□□□ -0.51
POLR2B-211ENST00000497845 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
POLR2B-211ENST00000497845 ILDR2Q71H61 639 aa11.87□□□□□ -0.51
POLR2B-211ENST00000497845 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
POLR2B-211ENST00000497845 SYNJ1O43426 1573 aa11.8□□□□□ -0.52
POLR2B-211ENST00000497845 TOPBP1Q92547 1522 aa11.8□□□□□ -0.52
POLR2B-211ENST00000497845 CHMP7Q8WUX9 453 aaPredicted RBP11.79□□□□□ -0.52
POLR2B-211ENST00000497845 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
POLR2B-211ENST00000497845 KIF13AQ9H1H9 1805 aa11.78□□□□□ -0.52
POLR2B-211ENST00000497845 SYNJ2O15056 1496 aa11.77□□□□□ -0.52
POLR2B-211ENST00000497845 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
POLR2B-211ENST00000497845 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
POLR2B-211ENST00000497845 DISP3Q9P2K9 1392 aa11.75□□□□□ -0.53
POLR2B-211ENST00000497845 ADGRL1O94910 1474 aa11.75□□□□□ -0.53
POLR2B-211ENST00000497845 SNAPC4Q5SXM2 1469 aa11.75□□□□□ -0.53
POLR2B-211ENST00000497845 FAM69CQ0P6D2 419 aa11.74□□□□□ -0.53
POLR2B-211ENST00000497845 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
POLR2B-211ENST00000497845 TARBP1Q13395 1621 aaKnown RBP11.74□□□□□ -0.53
POLR2B-211ENST00000497845 KDM6BO15054 1643 aa11.73□□□□□ -0.53
POLR2B-211ENST00000497845 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
POLR2B-211ENST00000497845 WIZO95785 1651 aa11.71□□□□□ -0.54
POLR2B-211ENST00000497845 TDRD9Q8NDG6 1382 aaKnown RBP11.69□□□□□ -0.54
POLR2B-211ENST00000497845 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
POLR2B-211ENST00000497845 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
POLR2B-211ENST00000497845 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
POLR2B-211ENST00000497845 ABCC10Q5T3U5 1492 aa11.66□□□□□ -0.54
POLR2B-211ENST00000497845 ZRANB1Q9UGI0 708 aa11.65□□□□□ -0.54
POLR2B-211ENST00000497845 DNMBPQ6XZF7 1577 aa11.65□□□□□ -0.54
POLR2B-211ENST00000497845 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
POLR2B-211ENST00000497845 RAD54L2Q9Y4B4 1467 aa11.63□□□□□ -0.55
POLR2B-211ENST00000497845 POLA1P09884 1462 aaPredicted RBP11.63□□□□□ -0.55
POLR2B-211ENST00000497845 PRDM2Q13029 1718 aa11.6□□□□□ -0.55
POLR2B-211ENST00000497845 POTEJP0CG39 1038 aa11.59□□□□□ -0.55
POLR2B-211ENST00000497845 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
POLR2B-211ENST00000497845 FOXD4L1Q9NU39 408 aa11.59□□□□□ -0.55
POLR2B-211ENST00000497845 DIP2BQ9P265 1576 aa11.58□□□□□ -0.56
POLR2B-211ENST00000497845 SOGA1O94964 1423 aa11.57□□□□□ -0.56
POLR2B-211ENST00000497845 GRIN2BQ13224 1484 aa11.57□□□□□ -0.56
POLR2B-211ENST00000497845 MKRN4PQ13434 485 aaPredicted RBP11.55□□□□□ -0.56
POLR2B-211ENST00000497845 CEP170Q5SW79 1584 aa11.54□□□□□ -0.56
POLR2B-211ENST00000497845 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
POLR2B-211ENST00000497845 MAMSTRQ6ZN01 415 aa11.53□□□□□ -0.56
POLR2B-211ENST00000497845 CDAN1Q8IWY9 1227 aa11.53□□□□□ -0.56
POLR2B-211ENST00000497845 MAPKBP1O60336 1514 aa11.51□□□□□ -0.57
POLR2B-211ENST00000497845 WDR97A6NE52 1622 aa11.51□□□□□ -0.57
POLR2B-211ENST00000497845 TSPOAP1O95153 1857 aa11.51□□□□□ -0.57
POLR2B-211ENST00000497845 TOP2AP11388 1531 aaKnown RBP11.5□□□□□ -0.57
POLR2B-211ENST00000497845 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
POLR2B-211ENST00000497845 SPATA31D1Q6ZQQ2 1576 aa11.49□□□□□ -0.57
POLR2B-211ENST00000497845 CERKQ8TCT0 537 aa11.43□□□□□ -0.58
POLR2B-211ENST00000497845 FGD5Q6ZNL6 1462 aa11.42□□□□□ -0.58
POLR2B-211ENST00000497845 SHROOM2Q13796 1616 aa11.42□□□□□ -0.58
POLR2B-211ENST00000497845 CCDC88BA6NC98 1476 aa11.41□□□□□ -0.58
POLR2B-211ENST00000497845 GRIN2AQ12879 1464 aa11.41□□□□□ -0.58
POLR2B-211ENST00000497845 C7P10643 843 aa11.41□□□□□ -0.58
POLR2B-211ENST00000497845 SCUBE2Q9NQ36 999 aa11.41□□□□□ -0.58
POLR2B-211ENST00000497845 TOP2BQ02880 1626 aa11.41□□□□□ -0.58
POLR2B-211ENST00000497845 PRG4Q92954 1404 aaPredicted RBP11.41□□□□□ -0.58
POLR2B-211ENST00000497845 COL17A1Q9UMD9 1497 aaPredicted RBP11.4□□□□□ -0.58
POLR2B-211ENST00000497845 SLC39A7Q92504 469 aa11.4□□□□□ -0.58
POLR2B-211ENST00000497845 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
POLR2B-211ENST00000497845 NUP160Q12769 1436 aa11.4□□□□□ -0.58
POLR2B-211ENST00000497845 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms