RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-209ENST00000497816 CARMIL1Q5VZK9 1371 aa25.12■■□□□ 1.61
IVD-209ENST00000497816 JPH4Q96JJ6 628 aa25.11■■□□□ 1.61
IVD-209ENST00000497816 KIAA0586Q9BVV6 1533 aa25.1■■□□□ 1.61
IVD-209ENST00000497816 TRHP20396 242 aaPredicted RBP25.02■■□□□ 1.6
IVD-209ENST00000497816 RAPGEF2Q9Y4G8 1499 aa24.95■■□□□ 1.59
IVD-209ENST00000497816 IQGAP2Q13576 1575 aa24.95■■□□□ 1.58
IVD-209ENST00000497816 ADCY10Q96PN6 1610 aa24.87■■□□□ 1.57
IVD-209ENST00000497816 CTTNBP2Q8WZ74 1663 aa24.85■■□□□ 1.57
IVD-209ENST00000497816 KIF13AQ9H1H9 1805 aa24.81■■□□□ 1.56
IVD-209ENST00000497816 CARMIL2Q6F5E8 1435 aa24.81■■□□□ 1.56
IVD-209ENST00000497816 PRXQ9BXM0 1461 aa24.8■■□□□ 1.56
IVD-209ENST00000497816 UGGT2Q9NYU1 1516 aa24.8■■□□□ 1.56
IVD-209ENST00000497816 DISP1Q96F81 1524 aa24.79■■□□□ 1.56
IVD-209ENST00000497816 PTPRGP23470 1445 aa24.76■■□□□ 1.55
IVD-209ENST00000497816 TNIKQ9UKE5 1360 aa24.75■■□□□ 1.55
IVD-209ENST00000497816 MAPKBP1O60336 1514 aa24.74■■□□□ 1.55
IVD-209ENST00000497816 KIAA0556O60303 1618 aa24.73■■□□□ 1.55
IVD-209ENST00000497816 NPM1P06748 294 aaKnown RBP eCLIP24.67■■□□□ 1.54
IVD-209ENST00000497816 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
IVD-209ENST00000497816 DIP2BQ9P265 1576 aa24.65■■□□□ 1.54
IVD-209ENST00000497816 ABCC10Q5T3U5 1492 aa24.64■■□□□ 1.54
IVD-209ENST00000497816 EEA1Q15075 1411 aa24.64■■□□□ 1.54
IVD-209ENST00000497816 UHRF1BP1LA0JNW5 1464 aa24.64■■□□□ 1.53
IVD-209ENST00000497816 ABCC2Q92887 1545 aa24.63■■□□□ 1.53
IVD-209ENST00000497816 CSRNP3Q8WYN3 585 aa24.63■■□□□ 1.53
IVD-209ENST00000497816 UACAQ9BZF9 1416 aa24.6■■□□□ 1.53
IVD-209ENST00000497816 GOLGA3Q08378 1498 aa24.59■■□□□ 1.53
IVD-209ENST00000497816 FAM69CQ0P6D2 419 aa24.54■■□□□ 1.52
IVD-209ENST00000497816 KDM5BQ9UGL1 1544 aa24.53■■□□□ 1.52
IVD-209ENST00000497816 ZCCHC11Q5TAX3 1644 aaKnown RBP24.52■■□□□ 1.52
IVD-209ENST00000497816 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
IVD-209ENST00000497816 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
IVD-209ENST00000497816 ASXL2Q76L83 1435 aa24.49■■□□□ 1.51
IVD-209ENST00000497816 KIF21BO75037 1637 aa24.49■■□□□ 1.51
IVD-209ENST00000497816 PLB1Q6P1J6 1458 aa24.48■■□□□ 1.51
IVD-209ENST00000497816 ABCA8O94911 1581 aa24.47■■□□□ 1.51
IVD-209ENST00000497816 SAMD9Q5K651 1589 aa24.47■■□□□ 1.51
IVD-209ENST00000497816 FAM9AQ8IZU1 332 aaPredicted RBP24.45■■□□□ 1.51
IVD-209ENST00000497816 GLI2P10070 1586 aa24.43■■□□□ 1.5
IVD-209ENST00000497816 PPRC1Q5VV67 1664 aaKnown RBP24.39■■□□□ 1.49
IVD-209ENST00000497816 EPRSP07814 1512 aaKnown RBP24.36■■□□□ 1.49
IVD-209ENST00000497816 MAP3K4Q9Y6R4 1608 aa24.34■■□□□ 1.49
IVD-209ENST00000497816 P3H3Q8IVL6 736 aa24.34■■□□□ 1.49
IVD-209ENST00000497816 WDR7Q9Y4E6 1490 aa24.33■■□□□ 1.48
IVD-209ENST00000497816 KDM6BO15054 1643 aa24.32■■□□□ 1.48
IVD-209ENST00000497816 RAPGEF6Q8TEU7 1601 aa24.29■■□□□ 1.48
IVD-209ENST00000497816 EFCAB5A4FU69 1503 aa24.26■■□□□ 1.47
IVD-209ENST00000497816 FHOD3Q2V2M9 1422 aa24.24■■□□□ 1.47
IVD-209ENST00000497816 ATP10BO94823 1461 aa24.23■■□□□ 1.47
IVD-209ENST00000497816 CFAP43Q8NDM7 1665 aa24.22■■□□□ 1.47
IVD-209ENST00000497816 RANGAP1P46060 587 aaPredicted RBP24.22■■□□□ 1.47
IVD-209ENST00000497816 NUP153P49790 1475 aaKnown RBP24.17■■□□□ 1.46
IVD-209ENST00000497816 TEX14Q8IWB6 1497 aa24.17■■□□□ 1.46
IVD-209ENST00000497816 ARID3CA6NKF2 412 aa24.15■■□□□ 1.46
IVD-209ENST00000497816 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
IVD-209ENST00000497816 UBTFP17480 764 aaKnown RBP24.15■■□□□ 1.46
IVD-209ENST00000497816 KCNH8Q96L42 1107 aa24.12■■□□□ 1.45
IVD-209ENST00000497816 MAGI3Q5TCQ9 1506 aa24.12■■□□□ 1.45
IVD-209ENST00000497816 COL17A1Q9UMD9 1497 aaPredicted RBP24.11■■□□□ 1.45
IVD-209ENST00000497816 CD109Q6YHK3 1445 aa24.1■■□□□ 1.45
IVD-209ENST00000497816 ABCA9Q8IUA7 1624 aa24.09■■□□□ 1.45
IVD-209ENST00000497816 ARHGAP35Q9NRY4 1499 aa24.08■■□□□ 1.45
IVD-209ENST00000497816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
IVD-209ENST00000497816 HNRNPUL2Q1KMD3 747 aaKnown RBP24■■□□□ 1.43
IVD-209ENST00000497816 FMN1Q68DA7 1419 aa23.99■■□□□ 1.43
IVD-209ENST00000497816 AEBP2Q6ZN18 517 aaPredicted RBP23.98■■□□□ 1.43
IVD-209ENST00000497816 HECW1Q76N89 1606 aa23.98■■□□□ 1.43
IVD-209ENST00000497816 CDK13Q14004 1512 aaKnown RBP23.97■■□□□ 1.43
IVD-209ENST00000497816 LRRIQ1Q96JM4 1722 aa23.93■■□□□ 1.42
IVD-209ENST00000497816 ARAP3Q8WWN8 1544 aa23.92■■□□□ 1.42
IVD-209ENST00000497816 PLEKHD1A6NEE1 506 aa23.91■■□□□ 1.42
IVD-209ENST00000497816 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.9■■□□□ 1.42
IVD-209ENST00000497816 TTC37Q6PGP7 1564 aa23.88■■□□□ 1.41
IVD-209ENST00000497816 NEO1Q92859 1461 aa23.88■■□□□ 1.41
IVD-209ENST00000497816 PHLDB1Q86UU1 1377 aa23.86■■□□□ 1.41
IVD-209ENST00000497816 KDM4FA0A1W2PPD8 638 aa23.86■■□□□ 1.41
IVD-209ENST00000497816 PCF11O94913 1555 aaKnown RBP23.84■■□□□ 1.41
IVD-209ENST00000497816 ATP1B4Q9UN42 357 aaPredicted RBP23.81■■□□□ 1.4
IVD-209ENST00000497816 CFAP74Q9C0B2 1584 aa23.81■■□□□ 1.4
IVD-209ENST00000497816 FRMPD1Q5SYB0 1578 aa23.8■■□□□ 1.4
IVD-209ENST00000497816 ADGRL1O94910 1474 aa23.79■■□□□ 1.4
IVD-209ENST00000497816 CLIP1P30622 1438 aa23.79■■□□□ 1.4
IVD-209ENST00000497816 CASKIN1Q8WXD9 1431 aa23.79■■□□□ 1.4
IVD-209ENST00000497816 KIF14Q15058 1648 aa23.78■■□□□ 1.4
IVD-209ENST00000497816 MYO5CQ9NQX4 1742 aa23.77■■□□□ 1.4
IVD-209ENST00000497816 FANCAO15360 1455 aa23.76■■□□□ 1.39
IVD-209ENST00000497816 RICTORQ6R327 1708 aa23.76■■□□□ 1.39
IVD-209ENST00000497816 TROQ12816 1431 aaPredicted RBP23.74■■□□□ 1.39
IVD-209ENST00000497816 CCDC18Q5T9S5 1454 aa23.73■■□□□ 1.39
IVD-209ENST00000497816 FYCO1Q9BQS8 1478 aa23.73■■□□□ 1.39
IVD-209ENST00000497816 AKNAQ7Z591 1439 aa23.73■■□□□ 1.39
IVD-209ENST00000497816 CDK11AQ9UQ88 783 aaPredicted RBP23.73■■□□□ 1.39
IVD-209ENST00000497816 RAPGEF3O95398 923 aa23.72■■□□□ 1.39
IVD-209ENST00000497816 PLCH2O75038 1416 aa23.71■■□□□ 1.39
IVD-209ENST00000497816 DENND4BO75064 1496 aaPredicted RBP23.68■■□□□ 1.38
IVD-209ENST00000497816 CDC42BPBQ9Y5S2 1711 aa23.64■■□□□ 1.38
IVD-209ENST00000497816 ZMYM4Q5VZL5 1548 aa23.64■■□□□ 1.37
IVD-209ENST00000497816 ARHGEF40Q8TER5 1519 aa23.64■■□□□ 1.37
IVD-209ENST00000497816 CEP162Q5TB80 1403 aa23.62■■□□□ 1.37
IVD-209ENST00000497816 PREX2Q70Z35 1606 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms