RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 KIF21AQ7Z4S6 1674 aa9.72□□□□□ -0.85
SGIP1-214ENST00000497055 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
SGIP1-214ENST00000497055 MIER1Q8N108 512 aa9.68□□□□□ -0.86
SGIP1-214ENST00000497055 PDS5BQ9NTI5 1447 aa9.66□□□□□ -0.86
SGIP1-214ENST00000497055 PLCD3Q8N3E9 789 aa9.66□□□□□ -0.86
SGIP1-214ENST00000497055 FXR2P51116 673 aaKnown RBP eCLIP9.65□□□□□ -0.86
SGIP1-214ENST00000497055 LAMC3Q9Y6N6 1575 aa9.64□□□□□ -0.87
SGIP1-214ENST00000497055 PLEKHG5O94827 1062 aa9.64□□□□□ -0.87
SGIP1-214ENST00000497055 ARAP1Q96P48 1450 aa9.63□□□□□ -0.87
SGIP1-214ENST00000497055 MRC2Q9UBG0 1479 aa9.63□□□□□ -0.87
SGIP1-214ENST00000497055 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
SGIP1-214ENST00000497055 PIP4P2Q8N4L2 257 aa9.61□□□□□ -0.87
SGIP1-214ENST00000497055 WDR62O43379 1518 aa9.61□□□□□ -0.87
SGIP1-214ENST00000497055 ATAD2BQ9ULI0 1458 aa9.6□□□□□ -0.87
SGIP1-214ENST00000497055 DCAF1Q9Y4B6 1507 aa9.58□□□□□ -0.88
SGIP1-214ENST00000497055 PRKAR2AP13861 404 aaKnown RBP9.58□□□□□ -0.88
SGIP1-214ENST00000497055 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
SGIP1-214ENST00000497055 CHADLQ6NUI6 762 aa9.57□□□□□ -0.88
SGIP1-214ENST00000497055 HMGXB3Q12766 1538 aa9.56□□□□□ -0.88
SGIP1-214ENST00000497055 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
SGIP1-214ENST00000497055 ZBTB47Q9UFB7 747 aaPredicted RBP9.56□□□□□ -0.88
SGIP1-214ENST00000497055 LMTK3Q96Q04 1460 aa9.55□□□□□ -0.88
SGIP1-214ENST00000497055 MNX1P50219 401 aaPredicted RBP9.53□□□□□ -0.88
SGIP1-214ENST00000497055 ZCCHC6Q5VYS8 1495 aaKnown RBP9.53□□□□□ -0.88
SGIP1-214ENST00000497055 SOCS7O14512 581 aa9.51□□□□□ -0.89
SGIP1-214ENST00000497055 FARP1Q9Y4F1 1045 aaPredicted RBP9.51□□□□□ -0.89
SGIP1-214ENST00000497055 FBXO41Q8TF61 875 aa9.49□□□□□ -0.89
SGIP1-214ENST00000497055 KDM4FA0A1W2PPD8 638 aa9.48□□□□□ -0.89
SGIP1-214ENST00000497055 NPM1P06748 294 aaKnown RBP eCLIP9.48□□□□□ -0.89
SGIP1-214ENST00000497055 SPOCK2Q92563 424 aa9.48□□□□□ -0.89
SGIP1-214ENST00000497055 BAZ1BQ9UIG0 1483 aaKnown RBP9.47□□□□□ -0.89
SGIP1-214ENST00000497055 ILDR2Q71H61 639 aa9.43□□□□□ -0.9
SGIP1-214ENST00000497055 CEP164Q9UPV0 1460 aa9.42□□□□□ -0.9
SGIP1-214ENST00000497055 CADPSQ9ULU8 1353 aa9.42□□□□□ -0.9
SGIP1-214ENST00000497055 RSF1Q96T23 1441 aaPredicted RBP9.41□□□□□ -0.9
SGIP1-214ENST00000497055 NUBP1P53384 320 aa9.41□□□□□ -0.9
SGIP1-214ENST00000497055 POTEHQ6S545 545 aa9.4□□□□□ -0.9
SGIP1-214ENST00000497055 ERCC6L2Q5T890 1561 aa9.4□□□□□ -0.9
SGIP1-214ENST00000497055 RASEFQ8IZ41 740 aa9.36□□□□□ -0.91
SGIP1-214ENST00000497055 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
SGIP1-214ENST00000497055 SMARCA4P51532 1647 aa9.35□□□□□ -0.91
SGIP1-214ENST00000497055 AMER1Q5JTC6 1135 aaPredicted RBP9.35□□□□□ -0.91
SGIP1-214ENST00000497055 HECW2Q9P2P5 1572 aa9.34□□□□□ -0.91
SGIP1-214ENST00000497055 DCAF8Q5TAQ9 597 aa9.34□□□□□ -0.91
SGIP1-214ENST00000497055 FAM212AQ96EL1 285 aa9.34□□□□□ -0.91
SGIP1-214ENST00000497055 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
SGIP1-214ENST00000497055 GSE1Q14687 1217 aa9.33□□□□□ -0.92
SGIP1-214ENST00000497055 DISP3Q9P2K9 1392 aa9.33□□□□□ -0.92
SGIP1-214ENST00000497055 CHD1O14646 1710 aa9.32□□□□□ -0.92
SGIP1-214ENST00000497055 CIZ1Q9ULV3 898 aaPredicted RBP9.32□□□□□ -0.92
SGIP1-214ENST00000497055 C19orf67A6NJJ6 358 aa9.31□□□□□ -0.92
SGIP1-214ENST00000497055 HAX1O00165 279 aa9.31□□□□□ -0.92
SGIP1-214ENST00000497055 PAK3O75914 559 aaPredicted RBP9.31□□□□□ -0.92
SGIP1-214ENST00000497055 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
SGIP1-214ENST00000497055 URB2Q14146 1524 aaKnown RBP9.31□□□□□ -0.92
SGIP1-214ENST00000497055 CD44P16070 742 aaKnown RBP9.3□□□□□ -0.92
SGIP1-214ENST00000497055 RTN4Q9NQC3 1192 aaKnown RBP9.3□□□□□ -0.92
SGIP1-214ENST00000497055 PKD2Q13563 968 aa9.27□□□□□ -0.93
SGIP1-214ENST00000497055 ZRANB1Q9UGI0 708 aa9.26□□□□□ -0.93
SGIP1-214ENST00000497055 IFT140Q96RY7 1462 aa9.26□□□□□ -0.93
SGIP1-214ENST00000497055 SYNJ2O15056 1496 aa9.24□□□□□ -0.93
SGIP1-214ENST00000497055 CCDC61Q9Y6R9 512 aa9.24□□□□□ -0.93
SGIP1-214ENST00000497055 EIF4G3O43432 1585 aaKnown RBP9.23□□□□□ -0.93
SGIP1-214ENST00000497055 CHRM1P11229 460 aaPredicted RBP9.22□□□□□ -0.93
SGIP1-214ENST00000497055 PEG3Q9GZU2 1588 aa9.21□□□□□ -0.93
SGIP1-214ENST00000497055 ECM2O94769 699 aaPredicted RBP9.21□□□□□ -0.94
SGIP1-214ENST00000497055 EVX2Q03828 476 aa9.21□□□□□ -0.94
SGIP1-214ENST00000497055 GAPVD1Q14C86 1478 aa9.21□□□□□ -0.94
SGIP1-214ENST00000497055 PYGBP11216 843 aa9.19□□□□□ -0.94
SGIP1-214ENST00000497055 ADGRL1O94910 1474 aa9.19□□□□□ -0.94
SGIP1-214ENST00000497055 CLASP1Q7Z460 1538 aa9.18□□□□□ -0.94
SGIP1-214ENST00000497055 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
SGIP1-214ENST00000497055 KIF13AQ9H1H9 1805 aa9.17□□□□□ -0.94
SGIP1-214ENST00000497055 AQRO60306 1485 aaKnown RBP eCLIP9.17□□□□□ -0.94
SGIP1-214ENST00000497055 PHF12Q96QT6 1004 aa9.16□□□□□ -0.94
SGIP1-214ENST00000497055 KIF12Q96FN5 646 aa9.15□□□□□ -0.94
SGIP1-214ENST00000497055 KDM6BO15054 1643 aa9.15□□□□□ -0.94
SGIP1-214ENST00000497055 MAP3K13O43283 966 aa9.13□□□□□ -0.95
SGIP1-214ENST00000497055 CLCN6P51797 869 aa9.13□□□□□ -0.95
SGIP1-214ENST00000497055 FAM69CQ0P6D2 419 aa9.13□□□□□ -0.95
SGIP1-214ENST00000497055 SGIP1Q9BQI5 828 aa9.13□□□□□ -0.95
SGIP1-214ENST00000497055 SYNJ1O43426 1573 aa9.12□□□□□ -0.95
SGIP1-214ENST00000497055 RGL2O15211 777 aa9.11□□□□□ -0.95
SGIP1-214ENST00000497055 PCDHB13Q9Y5F0 798 aa9.11□□□□□ -0.95
SGIP1-214ENST00000497055 CFTRP13569 1480 aa9.1□□□□□ -0.95
SGIP1-214ENST00000497055 SPATA31D1Q6ZQQ2 1576 aa9.09□□□□□ -0.95
SGIP1-214ENST00000497055 ZNF467Q7Z7K2 595 aaPredicted RBP9.09□□□□□ -0.95
SGIP1-214ENST00000497055 CHMP7Q8WUX9 453 aaPredicted RBP9.09□□□□□ -0.95
SGIP1-214ENST00000497055 RIOK3O14730 519 aaKnown RBP9.08□□□□□ -0.96
SGIP1-214ENST00000497055 RNF25Q96BH1 459 aaPredicted RBP9.08□□□□□ -0.96
SGIP1-214ENST00000497055 MROH2BQ7Z745 1585 aa9.07□□□□□ -0.96
SGIP1-214ENST00000497055 IFNL1Q8IU54 200 aa9.07□□□□□ -0.96
SGIP1-214ENST00000497055 PCDHB8Q9UN66 801 aa9.07□□□□□ -0.96
SGIP1-214ENST00000497055 SP7Q8TDD2 431 aaPredicted RBP9.06□□□□□ -0.96
SGIP1-214ENST00000497055 TAOK2Q9UL54 1235 aa9.06□□□□□ -0.96
SGIP1-214ENST00000497055 GABBR2O75899 941 aa9.05□□□□□ -0.96
SGIP1-214ENST00000497055 MS4A3Q96HJ5 214 aa9.05□□□□□ -0.96
SGIP1-214ENST00000497055 TOPBP1Q92547 1522 aa9.05□□□□□ -0.96
SGIP1-214ENST00000497055 SNAPC4Q5SXM2 1469 aa9.04□□□□□ -0.96
SGIP1-214ENST00000497055 VGFO15240 615 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms