RNA–Protein interactions for RNA: ENST00000496969.1

SF1-219, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-219ENST00000496969 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
SF1-219ENST00000496969 KIAA0586Q9BVV6 1533 aa14.36□□□□□ -0.11
SF1-219ENST00000496969 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
SF1-219ENST00000496969 JPH4Q96JJ6 628 aa14.33□□□□□ -0.12
SF1-219ENST00000496969 IQGAP2Q13576 1575 aa14.3□□□□□ -0.12
SF1-219ENST00000496969 RAPGEF2Q9Y4G8 1499 aa14.3□□□□□ -0.12
SF1-219ENST00000496969 CTTNBP2Q8WZ74 1663 aa14.26□□□□□ -0.13
SF1-219ENST00000496969 CARMIL2Q6F5E8 1435 aa14.24□□□□□ -0.13
SF1-219ENST00000496969 ADCY10Q96PN6 1610 aa14.2□□□□□ -0.14
SF1-219ENST00000496969 NPM1P06748 294 aaKnown RBP eCLIP14.19□□□□□ -0.14
SF1-219ENST00000496969 UGGT2Q9NYU1 1516 aa14.18□□□□□ -0.14
SF1-219ENST00000496969 TNIKQ9UKE5 1360 aa14.18□□□□□ -0.14
SF1-219ENST00000496969 PTPRGP23470 1445 aa14.17□□□□□ -0.14
SF1-219ENST00000496969 KIAA0556O60303 1618 aa14.17□□□□□ -0.14
SF1-219ENST00000496969 PRXQ9BXM0 1461 aa14.17□□□□□ -0.14
SF1-219ENST00000496969 EEA1Q15075 1411 aa14.16□□□□□ -0.14
SF1-219ENST00000496969 MAPKBP1O60336 1514 aa14.16□□□□□ -0.14
SF1-219ENST00000496969 KIF13AQ9H1H9 1805 aa14.15□□□□□ -0.14
SF1-219ENST00000496969 DISP1Q96F81 1524 aa14.15□□□□□ -0.14
SF1-219ENST00000496969 TTBK1Q5TCY1 1321 aaPredicted RBP14.15□□□□□ -0.15
SF1-219ENST00000496969 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
SF1-219ENST00000496969 ABCC2Q92887 1545 aa14.1□□□□□ -0.15
SF1-219ENST00000496969 DIP2BQ9P265 1576 aa14.09□□□□□ -0.15
SF1-219ENST00000496969 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
SF1-219ENST00000496969 UHRF1BP1LA0JNW5 1464 aa14.09□□□□□ -0.15
SF1-219ENST00000496969 ABCC10Q5T3U5 1492 aa14.09□□□□□ -0.15
SF1-219ENST00000496969 UACAQ9BZF9 1416 aa14.08□□□□□ -0.15
SF1-219ENST00000496969 KIF21BO75037 1637 aa14.04□□□□□ -0.16
SF1-219ENST00000496969 FAM69CQ0P6D2 419 aa14.04□□□□□ -0.16
SF1-219ENST00000496969 ZCCHC11Q5TAX3 1644 aaKnown RBP14.04□□□□□ -0.16
SF1-219ENST00000496969 PLB1Q6P1J6 1458 aa14.02□□□□□ -0.16
SF1-219ENST00000496969 FAM9AQ8IZU1 332 aaPredicted RBP14.02□□□□□ -0.17
SF1-219ENST00000496969 KDM5BQ9UGL1 1544 aa14.01□□□□□ -0.17
SF1-219ENST00000496969 SAMD9Q5K651 1589 aa14□□□□□ -0.17
SF1-219ENST00000496969 ASXL2Q76L83 1435 aa14□□□□□ -0.17
SF1-219ENST00000496969 TSPOAP1O95153 1857 aa13.99□□□□□ -0.17
SF1-219ENST00000496969 ABCA8O94911 1581 aa13.99□□□□□ -0.17
SF1-219ENST00000496969 GLI2P10070 1586 aa13.98□□□□□ -0.17
SF1-219ENST00000496969 CHIC1Q5VXU3 224 aa13.98□□□□□ -0.17
SF1-219ENST00000496969 KDM6BO15054 1643 aa13.95□□□□□ -0.18
SF1-219ENST00000496969 EFCAB5A4FU69 1503 aa13.95□□□□□ -0.18
SF1-219ENST00000496969 WDR7Q9Y4E6 1490 aa13.93□□□□□ -0.18
SF1-219ENST00000496969 P3H3Q8IVL6 736 aa13.93□□□□□ -0.18
SF1-219ENST00000496969 EPRSP07814 1512 aaKnown RBP13.93□□□□□ -0.18
SF1-219ENST00000496969 RAPGEF6Q8TEU7 1601 aa13.93□□□□□ -0.18
SF1-219ENST00000496969 MAP3K4Q9Y6R4 1608 aa13.92□□□□□ -0.18
SF1-219ENST00000496969 RANGAP1P46060 587 aaPredicted RBP13.9□□□□□ -0.18
SF1-219ENST00000496969 PPRC1Q5VV67 1664 aaKnown RBP13.9□□□□□ -0.18
SF1-219ENST00000496969 TEX14Q8IWB6 1497 aa13.89□□□□□ -0.19
SF1-219ENST00000496969 FHOD3Q2V2M9 1422 aa13.89□□□□□ -0.19
SF1-219ENST00000496969 CFAP43Q8NDM7 1665 aa13.88□□□□□ -0.19
SF1-219ENST00000496969 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
SF1-219ENST00000496969 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
SF1-219ENST00000496969 ATP10BO94823 1461 aa13.83□□□□□ -0.2
SF1-219ENST00000496969 ARID3CA6NKF2 412 aa13.83□□□□□ -0.2
SF1-219ENST00000496969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
SF1-219ENST00000496969 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
SF1-219ENST00000496969 NUP153P49790 1475 aaKnown RBP13.81□□□□□ -0.2
SF1-219ENST00000496969 KCNH8Q96L42 1107 aa13.8□□□□□ -0.2
SF1-219ENST00000496969 CD109Q6YHK3 1445 aa13.8□□□□□ -0.2
SF1-219ENST00000496969 MAGI3Q5TCQ9 1506 aa13.79□□□□□ -0.2
SF1-219ENST00000496969 HECW1Q76N89 1606 aa13.79□□□□□ -0.2
SF1-219ENST00000496969 ABCA9Q8IUA7 1624 aa13.79□□□□□ -0.2
SF1-219ENST00000496969 AEBP2Q6ZN18 517 aaPredicted RBP13.78□□□□□ -0.2
SF1-219ENST00000496969 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
SF1-219ENST00000496969 ARHGAP35Q9NRY4 1499 aa13.77□□□□□ -0.21
SF1-219ENST00000496969 CFAP74Q9C0B2 1584 aa13.71□□□□□ -0.21
SF1-219ENST00000496969 CDK13Q14004 1512 aaKnown RBP13.71□□□□□ -0.21
SF1-219ENST00000496969 PLEKHD1A6NEE1 506 aa13.71□□□□□ -0.21
SF1-219ENST00000496969 ATP1B4Q9UN42 357 aaPredicted RBP13.7□□□□□ -0.22
SF1-219ENST00000496969 COL17A1Q9UMD9 1497 aaPredicted RBP13.69□□□□□ -0.22
SF1-219ENST00000496969 PCF11O94913 1555 aaKnown RBP13.68□□□□□ -0.22
SF1-219ENST00000496969 PHLDB1Q86UU1 1377 aa13.68□□□□□ -0.22
SF1-219ENST00000496969 NEO1Q92859 1461 aa13.67□□□□□ -0.22
SF1-219ENST00000496969 ARAP3Q8WWN8 1544 aa13.67□□□□□ -0.22
SF1-219ENST00000496969 KIF14Q15058 1648 aa13.67□□□□□ -0.22
SF1-219ENST00000496969 TTC37Q6PGP7 1564 aa13.66□□□□□ -0.22
SF1-219ENST00000496969 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.66□□□□□ -0.227e-7■□□□□ 8.7
SF1-219ENST00000496969 CCDC18Q5T9S5 1454 aa13.66□□□□□ -0.22
SF1-219ENST00000496969 LRRIQ1Q96JM4 1722 aa13.65□□□□□ -0.22
SF1-219ENST00000496969 CDK11AQ9UQ88 783 aaPredicted RBP13.65□□□□□ -0.22
SF1-219ENST00000496969 CLIP1P30622 1438 aa13.64□□□□□ -0.23
SF1-219ENST00000496969 MYO5CQ9NQX4 1742 aa13.64□□□□□ -0.23
SF1-219ENST00000496969 CASKIN1Q8WXD9 1431 aa13.63□□□□□ -0.23
SF1-219ENST00000496969 FYCO1Q9BQS8 1478 aa13.62□□□□□ -0.23
SF1-219ENST00000496969 FANCAO15360 1455 aa13.61□□□□□ -0.23
SF1-219ENST00000496969 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
SF1-219ENST00000496969 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
SF1-219ENST00000496969 FRMPD1Q5SYB0 1578 aa13.59□□□□□ -0.23
SF1-219ENST00000496969 AKNAQ7Z591 1439 aa13.58□□□□□ -0.24
SF1-219ENST00000496969 DENND4BO75064 1496 aaPredicted RBP13.58□□□□□ -0.24
SF1-219ENST00000496969 RICTORQ6R327 1708 aa13.58□□□□□ -0.24
SF1-219ENST00000496969 PLCH2O75038 1416 aa13.56□□□□□ -0.24
SF1-219ENST00000496969 KDM4FA0A1W2PPD8 638 aa13.56□□□□□ -0.24
SF1-219ENST00000496969 ARHGAP5Q13017 1502 aa13.55□□□□□ -0.24
SF1-219ENST00000496969 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
SF1-219ENST00000496969 RAPGEF3O95398 923 aa13.54□□□□□ -0.24
SF1-219ENST00000496969 CEP162Q5TB80 1403 aa13.54□□□□□ -0.24
SF1-219ENST00000496969 PREX2Q70Z35 1606 aa13.53□□□□□ -0.24
SF1-219ENST00000496969 ZMYM4Q5VZL5 1548 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms