RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 TNIKQ9UKE5 1360 aa29.66■■■□□ 2.34
RGP1-202ENST00000496906 CTTNBP2Q8WZ74 1663 aa29.63■■■□□ 2.33
RGP1-202ENST00000496906 KIAA0586Q9BVV6 1533 aa29.61■■■□□ 2.33
RGP1-202ENST00000496906 OSCARQ8IYS5 282 aa29.59■■■□□ 2.33
RGP1-202ENST00000496906 IQGAP2Q13576 1575 aa29.56■■■□□ 2.32
RGP1-202ENST00000496906 CLASP1Q7Z460 1538 aa29.54■■■□□ 2.32
RGP1-202ENST00000496906 CEP162Q5TB80 1403 aa29.44■■■□□ 2.3
RGP1-202ENST00000496906 UGGT2Q9NYU1 1516 aa29.43■■■□□ 2.3
RGP1-202ENST00000496906 JPH4Q96JJ6 628 aa29.41■■■□□ 2.3
RGP1-202ENST00000496906 SHROOM2Q13796 1616 aa29.4■■■□□ 2.3
RGP1-202ENST00000496906 RANGAP1P46060 587 aaPredicted RBP29.39■■■□□ 2.3
RGP1-202ENST00000496906 CLIP1P30622 1438 aa29.38■■■□□ 2.29
RGP1-202ENST00000496906 DNAJC5Q9H3Z4 198 aa29.37■■■□□ 2.29
RGP1-202ENST00000496906 EFCAB5A4FU69 1503 aa29.33■■■□□ 2.29
RGP1-202ENST00000496906 SAMD9Q5K651 1589 aa29.33■■■□□ 2.29
RGP1-202ENST00000496906 ARHGAP35Q9NRY4 1499 aa29.32■■■□□ 2.28
RGP1-202ENST00000496906 DISP1Q96F81 1524 aa29.31■■■□□ 2.28
RGP1-202ENST00000496906 PRG4Q92954 1404 aaPredicted RBP29.3■■■□□ 2.28
RGP1-202ENST00000496906 KIAA0556O60303 1618 aa29.27■■■□□ 2.28
RGP1-202ENST00000496906 CARMIL2Q6F5E8 1435 aa29.25■■■□□ 2.27
RGP1-202ENST00000496906 ERCC6L2Q5T890 1561 aa29.21■■■□□ 2.27
RGP1-202ENST00000496906 ARAP1Q96P48 1450 aa29.21■■■□□ 2.27
RGP1-202ENST00000496906 P3H3Q8IVL6 736 aa29.21■■■□□ 2.27
RGP1-202ENST00000496906 FHOD3Q2V2M9 1422 aa29.2■■■□□ 2.26
RGP1-202ENST00000496906 ARHGEF11O15085 1522 aa29.12■■■□□ 2.25
RGP1-202ENST00000496906 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
RGP1-202ENST00000496906 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
RGP1-202ENST00000496906 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
RGP1-202ENST00000496906 FMN1Q68DA7 1419 aa29.04■■■□□ 2.24
RGP1-202ENST00000496906 PTPRGP23470 1445 aa29.03■■■□□ 2.24
RGP1-202ENST00000496906 VPS8Q8N3P4 1428 aa29.03■■■□□ 2.24
RGP1-202ENST00000496906 TTBK1Q5TCY1 1321 aaPredicted RBP29.01■■■□□ 2.23
RGP1-202ENST00000496906 PCF11O94913 1555 aaKnown RBP28.93■■■□□ 2.22
RGP1-202ENST00000496906 PLB1Q6P1J6 1458 aa28.92■■■□□ 2.22
RGP1-202ENST00000496906 CASKIN1Q8WXD9 1431 aa28.91■■■□□ 2.22
RGP1-202ENST00000496906 ABCA8O94911 1581 aa28.91■■■□□ 2.22
RGP1-202ENST00000496906 FYCO1Q9BQS8 1478 aa28.89■■■□□ 2.21
RGP1-202ENST00000496906 RAPGEF6Q8TEU7 1601 aa28.88■■■□□ 2.21
RGP1-202ENST00000496906 UACAQ9BZF9 1416 aa28.88■■■□□ 2.21
RGP1-202ENST00000496906 HECW1Q76N89 1606 aa28.82■■■□□ 2.2
RGP1-202ENST00000496906 CYB5RLQ6IPT4 315 aa28.82■■■□□ 2.2
RGP1-202ENST00000496906 ABCC2Q92887 1545 aa28.82■■■□□ 2.2
RGP1-202ENST00000496906 NUP153P49790 1475 aaKnown RBP28.81■■■□□ 2.2
RGP1-202ENST00000496906 UHRF1BP1LA0JNW5 1464 aa28.8■■■□□ 2.2
RGP1-202ENST00000496906 ATP1B4Q9UN42 357 aaPredicted RBP28.78■■■□□ 2.2
RGP1-202ENST00000496906 ADCY10Q96PN6 1610 aa28.75■■■□□ 2.19
RGP1-202ENST00000496906 EPRSP07814 1512 aaKnown RBP28.73■■■□□ 2.19
RGP1-202ENST00000496906 LRRIQ1Q96JM4 1722 aa28.72■■■□□ 2.19
RGP1-202ENST00000496906 CCDC18Q5T9S5 1454 aa28.7■■■□□ 2.19
RGP1-202ENST00000496906 CDK13Q14004 1512 aaKnown RBP28.68■■■□□ 2.18
RGP1-202ENST00000496906 ARID3CA6NKF2 412 aa28.68■■■□□ 2.18
RGP1-202ENST00000496906 ATP10BO94823 1461 aa28.68■■■□□ 2.18
RGP1-202ENST00000496906 MAP3K1Q13233 1512 aa28.67■■■□□ 2.18
RGP1-202ENST00000496906 KDM5BQ9UGL1 1544 aa28.67■■■□□ 2.18
RGP1-202ENST00000496906 TIAM1Q13009 1591 aa28.65■■■□□ 2.18
RGP1-202ENST00000496906 CFAP43Q8NDM7 1665 aa28.64■■■□□ 2.18
RGP1-202ENST00000496906 APLP2Q06481 763 aa28.64■■■□□ 2.18
RGP1-202ENST00000496906 ZCCHC11Q5TAX3 1644 aaKnown RBP28.61■■■□□ 2.17
RGP1-202ENST00000496906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.58■■■□□ 2.17
RGP1-202ENST00000496906 HNRNPUL2Q1KMD3 747 aaKnown RBP28.58■■■□□ 2.17
RGP1-202ENST00000496906 LRRC9Q6ZRR7 1453 aa28.52■■■□□ 2.16
RGP1-202ENST00000496906 MAGI3Q5TCQ9 1506 aa28.52■■■□□ 2.16
RGP1-202ENST00000496906 NPM1P06748 294 aaKnown RBP eCLIP28.52■■■□□ 2.16
RGP1-202ENST00000496906 KANK4Q5T7N3 995 aaPredicted RBP28.52■■■□□ 2.16
RGP1-202ENST00000496906 CDK11AQ9UQ88 783 aaPredicted RBP28.51■■■□□ 2.15
RGP1-202ENST00000496906 MTUS2Q5JR59 1369 aa28.48■■■□□ 2.15
RGP1-202ENST00000496906 EHBP1L1Q8N3D4 1523 aa28.47■■■□□ 2.15
RGP1-202ENST00000496906 PLEKHD1A6NEE1 506 aa28.46■■■□□ 2.15
RGP1-202ENST00000496906 TROQ12816 1431 aaPredicted RBP28.46■■■□□ 2.15
RGP1-202ENST00000496906 ASXL2Q76L83 1435 aa28.44■■■□□ 2.14
RGP1-202ENST00000496906 PPARGC1BQ86YN6 1023 aaKnown RBP28.43■■■□□ 2.14
RGP1-202ENST00000496906 MAPKBP1O60336 1514 aa28.43■■■□□ 2.14
RGP1-202ENST00000496906 WDR7Q9Y4E6 1490 aa28.42■■■□□ 2.14
RGP1-202ENST00000496906 SUPT6HQ7KZ85 1726 aaKnown RBP28.33■■■□□ 2.13
RGP1-202ENST00000496906 KIF14Q15058 1648 aa28.33■■■□□ 2.13
RGP1-202ENST00000496906 NCOA2Q15596 1464 aa28.31■■■□□ 2.12
RGP1-202ENST00000496906 KCNH8Q96L42 1107 aa28.28■■■□□ 2.12
RGP1-202ENST00000496906 ABCC10Q5T3U5 1492 aa28.26■■■□□ 2.12
RGP1-202ENST00000496906 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.24■■■□□ 2.11
RGP1-202ENST00000496906 PHLDB1Q86UU1 1377 aa28.22■■■□□ 2.11
RGP1-202ENST00000496906 TTC37Q6PGP7 1564 aa28.21■■■□□ 2.11
RGP1-202ENST00000496906 ABCA9Q8IUA7 1624 aa28.19■■■□□ 2.1
RGP1-202ENST00000496906 DIP2BQ9P265 1576 aa28.19■■■□□ 2.1
RGP1-202ENST00000496906 CCNB3Q8WWL7 1395 aa28.17■■■□□ 2.1
RGP1-202ENST00000496906 GLI2P10070 1586 aa28.16■■■□□ 2.1
RGP1-202ENST00000496906 MYOM3Q5VTT5 1437 aa28.15■■■□□ 2.1
RGP1-202ENST00000496906 GPATCH8Q9UKJ3 1502 aaKnown RBP28.15■■■□□ 2.1
RGP1-202ENST00000496906 CDC42BPAQ5VT25 1732 aa28.11■■■□□ 2.09
RGP1-202ENST00000496906 KIF13AQ9H1H9 1805 aa28.1■■■□□ 2.09
RGP1-202ENST00000496906 ITSN2Q9NZM3 1697 aa28.1■■■□□ 2.09
RGP1-202ENST00000496906 FAM69CQ0P6D2 419 aa28.1■■■□□ 2.09
RGP1-202ENST00000496906 PREX2Q70Z35 1606 aa28.09■■■□□ 2.09
RGP1-202ENST00000496906 MYO5CQ9NQX4 1742 aa28.09■■■□□ 2.09
RGP1-202ENST00000496906 PLCH2O75038 1416 aa28.07■■■□□ 2.08
RGP1-202ENST00000496906 FGD6Q6ZV73 1430 aa28.07■■■□□ 2.08
RGP1-202ENST00000496906 MAP3K4Q9Y6R4 1608 aa28.06■■■□□ 2.08
RGP1-202ENST00000496906 CD109Q6YHK3 1445 aa28.06■■■□□ 2.08
RGP1-202ENST00000496906 MIA2Q96PC5 1412 aa28.06■■■□□ 2.08
RGP1-202ENST00000496906 TRHP20396 242 aaPredicted RBP28.06■■■□□ 2.08
RGP1-202ENST00000496906 RRBP1Q9P2E9 1410 aaKnown RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms