RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 CCNB3Q8WWL7 1395 aa18.19■□□□□ 0.5
PDE6B-212ENST00000496514 NEUROD1Q13562 356 aa18.19■□□□□ 0.5
PDE6B-212ENST00000496514 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
PDE6B-212ENST00000496514 ABCA10Q8WWZ4 1543 aa18.14■□□□□ 0.49
PDE6B-212ENST00000496514 PHLDB1Q86UU1 1377 aa18.14■□□□□ 0.49
PDE6B-212ENST00000496514 MIER1Q8N108 512 aa18.14■□□□□ 0.49
PDE6B-212ENST00000496514 RRBP1Q9P2E9 1410 aaKnown RBP18.1■□□□□ 0.49
PDE6B-212ENST00000496514 PCF11O94913 1555 aaKnown RBP18.09■□□□□ 0.49
PDE6B-212ENST00000496514 TIAM1Q13009 1591 aa18.08■□□□□ 0.48
PDE6B-212ENST00000496514 PDS5BQ9NTI5 1447 aa18.08■□□□□ 0.48
PDE6B-212ENST00000496514 LRRC9Q6ZRR7 1453 aa18.06■□□□□ 0.48
PDE6B-212ENST00000496514 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
PDE6B-212ENST00000496514 RAB3GAP2Q9H2M9 1393 aa18.06■□□□□ 0.48
PDE6B-212ENST00000496514 GAPVD1Q14C86 1478 aa18.06■□□□□ 0.48
PDE6B-212ENST00000496514 AQRO60306 1485 aaKnown RBP eCLIP18.05■□□□□ 0.48
PDE6B-212ENST00000496514 LAMC3Q9Y6N6 1575 aa18.05■□□□□ 0.48
PDE6B-212ENST00000496514 ACIN1Q9UKV3 1341 aaKnown RBP18.04■□□□□ 0.48
PDE6B-212ENST00000496514 SIN3AQ96ST3 1273 aa18.04■□□□□ 0.48
PDE6B-212ENST00000496514 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.48
PDE6B-212ENST00000496514 GTF3C3Q9Y5Q9 886 aa17.98■□□□□ 0.47
PDE6B-212ENST00000496514 HIRIP3Q9BW71 556 aaPredicted RBP17.96■□□□□ 0.47
PDE6B-212ENST00000496514 MTUS2Q5JR59 1369 aa17.96■□□□□ 0.47
PDE6B-212ENST00000496514 FBLN2P98095 1184 aa17.94■□□□□ 0.46
PDE6B-212ENST00000496514 CENPBP07199 599 aaPredicted RBP17.93■□□□□ 0.46
PDE6B-212ENST00000496514 CHIC2Q9UKJ5 165 aa17.93■□□□□ 0.46
PDE6B-212ENST00000496514 CUL7Q14999 1698 aa17.92■□□□□ 0.46
PDE6B-212ENST00000496514 SETD5Q9C0A6 1442 aa17.91■□□□□ 0.46
PDE6B-212ENST00000496514 CASKIN1Q8WXD9 1431 aa17.91■□□□□ 0.46
PDE6B-212ENST00000496514 ZNF608Q9ULD9 1512 aaPredicted RBP17.91■□□□□ 0.46
PDE6B-212ENST00000496514 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
PDE6B-212ENST00000496514 CTTNBP2Q8WZ74 1663 aa17.9■□□□□ 0.46
PDE6B-212ENST00000496514 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
PDE6B-212ENST00000496514 FMN1Q68DA7 1419 aa17.87■□□□□ 0.45
PDE6B-212ENST00000496514 FYCO1Q9BQS8 1478 aa17.87■□□□□ 0.45
PDE6B-212ENST00000496514 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
PDE6B-212ENST00000496514 SNAPC4Q5SXM2 1469 aa17.84■□□□□ 0.45
PDE6B-212ENST00000496514 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
PDE6B-212ENST00000496514 CFAP43Q8NDM7 1665 aa17.84■□□□□ 0.45
PDE6B-212ENST00000496514 TARBP1Q13395 1621 aaKnown RBP17.84■□□□□ 0.45
PDE6B-212ENST00000496514 EFCAB5A4FU69 1503 aa17.84■□□□□ 0.45
PDE6B-212ENST00000496514 MAPKBP1O60336 1514 aa17.84■□□□□ 0.45
PDE6B-212ENST00000496514 MAP3K1Q13233 1512 aa17.83■□□□□ 0.44
PDE6B-212ENST00000496514 PTPRKQ15262 1439 aa17.81■□□□□ 0.44
PDE6B-212ENST00000496514 FGD6Q6ZV73 1430 aa17.8■□□□□ 0.44
PDE6B-212ENST00000496514 MRC2Q9UBG0 1479 aa17.8■□□□□ 0.44
PDE6B-212ENST00000496514 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
PDE6B-212ENST00000496514 PRKCSHP14314 528 aaPredicted RBP17.79■□□□□ 0.44
PDE6B-212ENST00000496514 LRRIQ1Q96JM4 1722 aa17.78■□□□□ 0.44
PDE6B-212ENST00000496514 KCNH8Q96L42 1107 aa17.77■□□□□ 0.44
PDE6B-212ENST00000496514 NCOA2Q15596 1464 aa17.77■□□□□ 0.44
PDE6B-212ENST00000496514 CDK13Q14004 1512 aaKnown RBP17.76■□□□□ 0.43
PDE6B-212ENST00000496514 DDX10Q13206 875 aaKnown RBP17.74■□□□□ 0.43
PDE6B-212ENST00000496514 MAGI3Q5TCQ9 1506 aa17.74■□□□□ 0.43
PDE6B-212ENST00000496514 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
PDE6B-212ENST00000496514 GRIN2BQ13224 1484 aa17.74■□□□□ 0.43
PDE6B-212ENST00000496514 SAMD9Q5K651 1589 aa17.73■□□□□ 0.43
PDE6B-212ENST00000496514 PBRM1Q86U86 1689 aa17.73■□□□□ 0.43
PDE6B-212ENST00000496514 CHMP7Q8WUX9 453 aaPredicted RBP17.73■□□□□ 0.43
PDE6B-212ENST00000496514 FOXD1Q16676 465 aa17.72■□□□□ 0.43
PDE6B-212ENST00000496514 ZNF644Q9H582 1327 aaPredicted RBP17.7■□□□□ 0.42
PDE6B-212ENST00000496514 MYOM3Q5VTT5 1437 aa17.69■□□□□ 0.42
PDE6B-212ENST00000496514 IQGAP2Q13576 1575 aa17.69■□□□□ 0.42
PDE6B-212ENST00000496514 ADAMTS12P58397 1594 aa17.68■□□□□ 0.42
PDE6B-212ENST00000496514 CCDC18Q5T9S5 1454 aa17.67■□□□□ 0.42
PDE6B-212ENST00000496514 ZNF777Q9ULD5 760 aaPredicted RBP17.67■□□□□ 0.42
PDE6B-212ENST00000496514 EPRSP07814 1512 aaKnown RBP17.64■□□□□ 0.41
PDE6B-212ENST00000496514 BCL11AQ9H165 835 aa17.64■□□□□ 0.41
PDE6B-212ENST00000496514 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
PDE6B-212ENST00000496514 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
PDE6B-212ENST00000496514 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
PDE6B-212ENST00000496514 PPP1R15AO75807 674 aaPredicted RBP17.61■□□□□ 0.41
PDE6B-212ENST00000496514 NAIPQ13075 1403 aa17.61■□□□□ 0.41
PDE6B-212ENST00000496514 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
PDE6B-212ENST00000496514 EHBP1L1Q8N3D4 1523 aa17.59■□□□□ 0.41
PDE6B-212ENST00000496514 EIF4G3O43432 1585 aaKnown RBP17.58■□□□□ 0.41
PDE6B-212ENST00000496514 PTPN23Q9H3S7 1636 aa17.58■□□□□ 0.41
PDE6B-212ENST00000496514 HFM1A2PYH4 1435 aa17.57■□□□□ 0.4
PDE6B-212ENST00000496514 WDR62O43379 1518 aa17.57■□□□□ 0.4
PDE6B-212ENST00000496514 UGGT2Q9NYU1 1516 aa17.57■□□□□ 0.4
PDE6B-212ENST00000496514 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
PDE6B-212ENST00000496514 DISP1Q96F81 1524 aa17.55■□□□□ 0.4
PDE6B-212ENST00000496514 HECW1Q76N89 1606 aa17.55■□□□□ 0.4
PDE6B-212ENST00000496514 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
PDE6B-212ENST00000496514 PRG4Q92954 1404 aaPredicted RBP17.54■□□□□ 0.4
PDE6B-212ENST00000496514 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.54■□□□□ 0.4
PDE6B-212ENST00000496514 JPH4Q96JJ6 628 aa17.54■□□□□ 0.4
PDE6B-212ENST00000496514 KDM6BO15054 1643 aa17.53■□□□□ 0.4
PDE6B-212ENST00000496514 KIAA0586Q9BVV6 1533 aa17.53■□□□□ 0.4
PDE6B-212ENST00000496514 UACAQ9BZF9 1416 aa17.52■□□□□ 0.4
PDE6B-212ENST00000496514 NUP153P49790 1475 aaKnown RBP17.5■□□□□ 0.39
PDE6B-212ENST00000496514 CNGB1Q14028 1251 aaPredicted RBP17.49■□□□□ 0.39
PDE6B-212ENST00000496514 MPHOSPH9Q99550 1183 aa17.49■□□□□ 0.39
PDE6B-212ENST00000496514 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
PDE6B-212ENST00000496514 KIAA0556O60303 1618 aa17.49■□□□□ 0.39
PDE6B-212ENST00000496514 CEP170Q5SW79 1584 aa17.46■□□□□ 0.39
PDE6B-212ENST00000496514 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
PDE6B-212ENST00000496514 ARHGEF11O15085 1522 aa17.46■□□□□ 0.38
PDE6B-212ENST00000496514 ZNF326Q5BKZ1 582 aaKnown RBP17.44■□□□□ 0.38
PDE6B-212ENST00000496514 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
PDE6B-212ENST00000496514 L3MBTL2Q969R5 705 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms