RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 LAMC3Q9Y6N6 1575 aa14.53□□□□□ -0.08
SURF1-204ENST00000495952 FYCO1Q9BQS8 1478 aa14.53□□□□□ -0.08
SURF1-204ENST00000495952 FANCD2Q9BXW9 1451 aa14.53□□□□□ -0.08
SURF1-204ENST00000495952 LRRC9Q6ZRR7 1453 aa14.52□□□□□ -0.08
SURF1-204ENST00000495952 CARMIL1Q5VZK9 1371 aa14.52□□□□□ -0.08
SURF1-204ENST00000495952 THOC2Q8NI27 1593 aaKnown RBP14.5□□□□□ -0.09
SURF1-204ENST00000495952 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
SURF1-204ENST00000495952 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
SURF1-204ENST00000495952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.47□□□□□ -0.09
SURF1-204ENST00000495952 KANK4Q5T7N3 995 aaPredicted RBP14.47□□□□□ -0.09
SURF1-204ENST00000495952 SAMD9Q5K651 1589 aa14.46□□□□□ -0.09
SURF1-204ENST00000495952 MAPKBP1O60336 1514 aa14.45□□□□□ -0.1
SURF1-204ENST00000495952 POLA1P09884 1462 aaPredicted RBP14.44□□□□□ -0.1
SURF1-204ENST00000495952 GTF3C3Q9Y5Q9 886 aa14.44□□□□□ -0.1
SURF1-204ENST00000495952 CASKIN1Q8WXD9 1431 aa14.42□□□□□ -0.1
SURF1-204ENST00000495952 FMN1Q68DA7 1419 aa14.39□□□□□ -0.11
SURF1-204ENST00000495952 SETD5Q9C0A6 1442 aa14.39□□□□□ -0.11
SURF1-204ENST00000495952 RANGAP1P46060 587 aaPredicted RBP14.38□□□□□ -0.11
SURF1-204ENST00000495952 MIER1Q8N108 512 aa14.38□□□□□ -0.11
SURF1-204ENST00000495952 RAB3GAP2Q9H2M9 1393 aa14.37□□□□□ -0.11
SURF1-204ENST00000495952 LRRIQ1Q96JM4 1722 aa14.37□□□□□ -0.11
SURF1-204ENST00000495952 SNAPC4Q5SXM2 1469 aa14.37□□□□□ -0.11
SURF1-204ENST00000495952 SUPT6HQ7KZ85 1726 aaKnown RBP14.35□□□□□ -0.11
SURF1-204ENST00000495952 PHLDB1Q86UU1 1377 aa14.34□□□□□ -0.11
SURF1-204ENST00000495952 PBRM1Q86U86 1689 aa14.33□□□□□ -0.11
SURF1-204ENST00000495952 EHBP1L1Q8N3D4 1523 aa14.33□□□□□ -0.12
SURF1-204ENST00000495952 TIMELESSQ9UNS1 1208 aa14.33□□□□□ -0.12
SURF1-204ENST00000495952 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
SURF1-204ENST00000495952 URB2Q14146 1524 aaKnown RBP14.31□□□□□ -0.12
SURF1-204ENST00000495952 GCC2Q8IWJ2 1684 aa14.3□□□□□ -0.12
SURF1-204ENST00000495952 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
SURF1-204ENST00000495952 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
SURF1-204ENST00000495952 GRIN2BQ13224 1484 aa14.28□□□□□ -0.12
SURF1-204ENST00000495952 HECW1Q76N89 1606 aa14.27□□□□□ -0.12
SURF1-204ENST00000495952 PTPN23Q9H3S7 1636 aa14.27□□□□□ -0.12
SURF1-204ENST00000495952 FGD6Q6ZV73 1430 aa14.27□□□□□ -0.12
SURF1-204ENST00000495952 ARHGEF11O15085 1522 aa14.26□□□□□ -0.13
SURF1-204ENST00000495952 CCDC18Q5T9S5 1454 aa14.26□□□□□ -0.13
SURF1-204ENST00000495952 NESP48681 1621 aa14.26□□□□□ -0.13
SURF1-204ENST00000495952 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
SURF1-204ENST00000495952 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
SURF1-204ENST00000495952 UGGT2Q9NYU1 1516 aa14.23□□□□□ -0.13
SURF1-204ENST00000495952 HFM1A2PYH4 1435 aa14.23□□□□□ -0.13
SURF1-204ENST00000495952 ADAMTS12P58397 1594 aa14.22□□□□□ -0.13
SURF1-204ENST00000495952 MYT1Q01538 1121 aa14.22□□□□□ -0.13
SURF1-204ENST00000495952 AKNAQ7Z591 1439 aa14.22□□□□□ -0.13
SURF1-204ENST00000495952 TCOF1Q13428 1488 aaKnown RBP14.2□□□□□ -0.14
SURF1-204ENST00000495952 YTHDC1Q96MU7 727 aaKnown RBP14.2□□□□□ -0.14
SURF1-204ENST00000495952 MYOM3Q5VTT5 1437 aa14.2□□□□□ -0.14
SURF1-204ENST00000495952 IQGAP2Q13576 1575 aa14.19□□□□□ -0.14
SURF1-204ENST00000495952 UACAQ9BZF9 1416 aa14.19□□□□□ -0.14
SURF1-204ENST00000495952 NCOA2Q15596 1464 aa14.18□□□□□ -0.14
SURF1-204ENST00000495952 MTUS2Q5JR59 1369 aa14.15□□□□□ -0.14
SURF1-204ENST00000495952 WDR62O43379 1518 aa14.13□□□□□ -0.15
SURF1-204ENST00000495952 FAM50AQ14320 339 aaKnown RBP14.12□□□□□ -0.15
SURF1-204ENST00000495952 ITGAEP38570 1179 aa14.11□□□□□ -0.15
SURF1-204ENST00000495952 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
SURF1-204ENST00000495952 NAIPQ13075 1403 aa14.1□□□□□ -0.15
SURF1-204ENST00000495952 MIA2Q96PC5 1412 aa14.1□□□□□ -0.15
SURF1-204ENST00000495952 MAGI3Q5TCQ9 1506 aa14.1□□□□□ -0.15
SURF1-204ENST00000495952 MRC2Q9UBG0 1479 aa14.08□□□□□ -0.16
SURF1-204ENST00000495952 KDM5BQ9UGL1 1544 aa14.07□□□□□ -0.16
SURF1-204ENST00000495952 EPRSP07814 1512 aaKnown RBP14.06□□□□□ -0.16
SURF1-204ENST00000495952 ITSN2Q9NZM3 1697 aa14.06□□□□□ -0.16
SURF1-204ENST00000495952 KIAA0556O60303 1618 aa14.05□□□□□ -0.16
SURF1-204ENST00000495952 DNMT1P26358 1616 aaKnown RBP14.05□□□□□ -0.16
SURF1-204ENST00000495952 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
SURF1-204ENST00000495952 PTPRKQ15262 1439 aa14.05□□□□□ -0.16
SURF1-204ENST00000495952 ADGBQ8N7X0 1667 aa14.04□□□□□ -0.16
SURF1-204ENST00000495952 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
SURF1-204ENST00000495952 P3H3Q8IVL6 736 aa14.04□□□□□ -0.16
SURF1-204ENST00000495952 TONSLQ96HA7 1378 aa14.04□□□□□ -0.16
SURF1-204ENST00000495952 CCER2I3L3R5 266 aa14.03□□□□□ -0.16
SURF1-204ENST00000495952 ADCY10Q96PN6 1610 aa14.03□□□□□ -0.16
SURF1-204ENST00000495952 IFT140Q96RY7 1462 aa14.02□□□□□ -0.16
SURF1-204ENST00000495952 RAPGEF6Q8TEU7 1601 aa14.01□□□□□ -0.17
SURF1-204ENST00000495952 CROCC2H7BZ55 1655 aa14.01□□□□□ -0.17
SURF1-204ENST00000495952 SUPT16HQ9Y5B9 1047 aaKnown RBP14□□□□□ -0.17
SURF1-204ENST00000495952 SIN3AQ96ST3 1273 aa13.98□□□□□ -0.17
SURF1-204ENST00000495952 ATP1B4Q9UN42 357 aaPredicted RBP13.98□□□□□ -0.17
SURF1-204ENST00000495952 ROCK1Q13464 1354 aa13.97□□□□□ -0.17
SURF1-204ENST00000495952 KIAA0586Q9BVV6 1533 aa13.97□□□□□ -0.17
SURF1-204ENST00000495952 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.18
SURF1-204ENST00000495952 CDK13Q14004 1512 aaKnown RBP13.95□□□□□ -0.18
SURF1-204ENST00000495952 DENND4BO75064 1496 aaPredicted RBP13.94□□□□□ -0.18
SURF1-204ENST00000495952 KDM6BO15054 1643 aa13.94□□□□□ -0.18
SURF1-204ENST00000495952 DISP1Q96F81 1524 aa13.92□□□□□ -0.18
SURF1-204ENST00000495952 ANP32CO43423 234 aa13.91□□□□□ -0.18
SURF1-204ENST00000495952 GRIN2AQ12879 1464 aa13.91□□□□□ -0.18
SURF1-204ENST00000495952 MAGI1Q96QZ7 1491 aaPredicted RBP13.91□□□□□ -0.18
SURF1-204ENST00000495952 DAPK1P53355 1430 aa13.9□□□□□ -0.18
SURF1-204ENST00000495952 NUP153P49790 1475 aaKnown RBP13.89□□□□□ -0.19
SURF1-204ENST00000495952 DDX10Q13206 875 aaKnown RBP13.89□□□□□ -0.19
SURF1-204ENST00000495952 ADGRL2O95490 1459 aa13.87□□□□□ -0.19
SURF1-204ENST00000495952 RPRD2Q5VT52 1461 aaKnown RBP13.87□□□□□ -0.19
SURF1-204ENST00000495952 TEX14Q8IWB6 1497 aa13.87□□□□□ -0.19
SURF1-204ENST00000495952 KIF14Q15058 1648 aa13.85□□□□□ -0.19
SURF1-204ENST00000495952 CNTLNQ9NXG0 1405 aa13.84□□□□□ -0.19
SURF1-204ENST00000495952 TROQ12816 1431 aaPredicted RBP13.83□□□□□ -0.2
SURF1-204ENST00000495952 CEP170Q5SW79 1584 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms