RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 CHMP7Q8WUX9 453 aaPredicted RBP38.44■■■■□ 3.74
PPP1R3F-205ENST00000495799 ARHGAP35Q9NRY4 1499 aa38.43■■■■□ 3.74
PPP1R3F-205ENST00000495799 EFCAB5A4FU69 1503 aa38.42■■■■□ 3.74
PPP1R3F-205ENST00000495799 VPS8Q8N3P4 1428 aa38.41■■■■□ 3.74
PPP1R3F-205ENST00000495799 IQGAP2Q13576 1575 aa38.38■■■■□ 3.73
PPP1R3F-205ENST00000495799 ARAP1Q96P48 1450 aa38.38■■■■□ 3.73
PPP1R3F-205ENST00000495799 KIAA0586Q9BVV6 1533 aa38.31■■■■□ 3.72
PPP1R3F-205ENST00000495799 FBLN2P98095 1184 aa38.29■■■■□ 3.72
PPP1R3F-205ENST00000495799 NUP160Q12769 1436 aa38.26■■■■□ 3.71
PPP1R3F-205ENST00000495799 SAMD9Q5K651 1589 aa38.25■■■■□ 3.71
PPP1R3F-205ENST00000495799 CEP170Q5SW79 1584 aa38.25■■■■□ 3.71
PPP1R3F-205ENST00000495799 CHD1O14646 1710 aa38.21■■■■□ 3.71
PPP1R3F-205ENST00000495799 UGGT2Q9NYU1 1516 aa38.18■■■■□ 3.7
PPP1R3F-205ENST00000495799 FHOD3Q2V2M9 1422 aa38.09■■■■□ 3.69
PPP1R3F-205ENST00000495799 APLP2Q06481 763 aa38.06■■■■□ 3.68
PPP1R3F-205ENST00000495799 FMN1Q68DA7 1419 aa38.05■■■■□ 3.68
PPP1R3F-205ENST00000495799 P3H3Q8IVL6 736 aa38.04■■■■□ 3.68
PPP1R3F-205ENST00000495799 KIAA0556O60303 1618 aa37.98■■■■□ 3.67
PPP1R3F-205ENST00000495799 DISP1Q96F81 1524 aa37.92■■■■□ 3.66
PPP1R3F-205ENST00000495799 FYCO1Q9BQS8 1478 aa37.92■■■■□ 3.66
PPP1R3F-205ENST00000495799 PCF11O94913 1555 aaKnown RBP37.92■■■■□ 3.66
PPP1R3F-205ENST00000495799 CARMIL2Q6F5E8 1435 aa37.9■■■■□ 3.66
PPP1R3F-205ENST00000495799 JPH4Q96JJ6 628 aa37.89■■■■□ 3.66
PPP1R3F-205ENST00000495799 CASKIN1Q8WXD9 1431 aa37.89■■■■□ 3.66
PPP1R3F-205ENST00000495799 MAP3K1Q13233 1512 aa37.85■■■■□ 3.65
PPP1R3F-205ENST00000495799 TRIM26Q12899 539 aaPredicted RBP37.84■■■■□ 3.65
PPP1R3F-205ENST00000495799 PPARGC1BQ86YN6 1023 aaKnown RBP37.8■■■■□ 3.64
PPP1R3F-205ENST00000495799 SHROOM2Q13796 1616 aa37.79■■■■□ 3.64
PPP1R3F-205ENST00000495799 CLASP1Q7Z460 1538 aa37.78■■■■□ 3.64
PPP1R3F-205ENST00000495799 TIAM1Q13009 1591 aa37.75■■■■□ 3.63
PPP1R3F-205ENST00000495799 CFAP43Q8NDM7 1665 aa37.75■■■■□ 3.63
PPP1R3F-205ENST00000495799 HECW1Q76N89 1606 aa37.7■■■■□ 3.63
PPP1R3F-205ENST00000495799 PRG4Q92954 1404 aaPredicted RBP37.69■■■■□ 3.62
PPP1R3F-205ENST00000495799 ATP1B4Q9UN42 357 aaPredicted RBP37.67■■■■□ 3.62
PPP1R3F-205ENST00000495799 CCDC18Q5T9S5 1454 aa37.62■■■■□ 3.61
PPP1R3F-205ENST00000495799 PCGF6Q9BYE7 350 aa37.61■■■■□ 3.61
PPP1R3F-205ENST00000495799 TTBK1Q5TCY1 1321 aaPredicted RBP37.6■■■■□ 3.61
PPP1R3F-205ENST00000495799 RAPGEF6Q8TEU7 1601 aa37.59■■■■□ 3.61
PPP1R3F-205ENST00000495799 LRRC9Q6ZRR7 1453 aa37.55■■■■□ 3.6
PPP1R3F-205ENST00000495799 LRRIQ1Q96JM4 1722 aa37.54■■■■□ 3.6
PPP1R3F-205ENST00000495799 KANK4Q5T7N3 995 aaPredicted RBP37.53■■■■□ 3.6
PPP1R3F-205ENST00000495799 OSCARQ8IYS5 282 aa37.51■■■■□ 3.59
PPP1R3F-205ENST00000495799 EPRSP07814 1512 aaKnown RBP37.47■■■■□ 3.59
PPP1R3F-205ENST00000495799 PTPRGP23470 1445 aa37.46■■■■□ 3.59
PPP1R3F-205ENST00000495799 ABCA8O94911 1581 aa37.43■■■■□ 3.58
PPP1R3F-205ENST00000495799 NUP153P49790 1475 aaKnown RBP37.41■■■■□ 3.58
PPP1R3F-205ENST00000495799 PLB1Q6P1J6 1458 aa37.41■■■■□ 3.58
PPP1R3F-205ENST00000495799 EHBP1L1Q8N3D4 1523 aa37.38■■■■□ 3.57
PPP1R3F-205ENST00000495799 ERCC6L2Q5T890 1561 aa37.38■■■■□ 3.57
PPP1R3F-205ENST00000495799 MTUS2Q5JR59 1369 aa37.38■■■■□ 3.57
PPP1R3F-205ENST00000495799 CDK13Q14004 1512 aaKnown RBP37.33■■■■□ 3.57
PPP1R3F-205ENST00000495799 SUPT6HQ7KZ85 1726 aaKnown RBP37.26■■■■□ 3.56
PPP1R3F-205ENST00000495799 UACAQ9BZF9 1416 aa37.26■■■■□ 3.56
PPP1R3F-205ENST00000495799 CDK11AQ9UQ88 783 aaPredicted RBP37.25■■■■□ 3.55
PPP1R3F-205ENST00000495799 RRBP1Q9P2E9 1410 aaKnown RBP37.2■■■■□ 3.55
PPP1R3F-205ENST00000495799 MAGI3Q5TCQ9 1506 aa37.19■■■■□ 3.54
PPP1R3F-205ENST00000495799 ABCC2Q92887 1545 aa37.18■■■■□ 3.54
PPP1R3F-205ENST00000495799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.17■■■■□ 3.54
PPP1R3F-205ENST00000495799 HNRNPUL2Q1KMD3 747 aaKnown RBP37.17■■■■□ 3.54
PPP1R3F-205ENST00000495799 ARID3CA6NKF2 412 aa37.15■■■■□ 3.54
PPP1R3F-205ENST00000495799 UHRF1BP1LA0JNW5 1464 aa37.13■■■■□ 3.53
PPP1R3F-205ENST00000495799 NCOA2Q15596 1464 aa37.13■■■■□ 3.53
PPP1R3F-205ENST00000495799 ATP10BO94823 1461 aa37.12■■■■□ 3.53
PPP1R3F-205ENST00000495799 PHLDB1Q86UU1 1377 aa37.11■■■■□ 3.53
PPP1R3F-205ENST00000495799 ARHGEF11O15085 1522 aa37.09■■■■□ 3.53
PPP1R3F-205ENST00000495799 CCNB3Q8WWL7 1395 aa37.09■■■■□ 3.53
PPP1R3F-205ENST00000495799 TROQ12816 1431 aaPredicted RBP37.08■■■■□ 3.53
PPP1R3F-205ENST00000495799 ADCY10Q96PN6 1610 aa37.02■■■■□ 3.52
PPP1R3F-205ENST00000495799 PLEKHD1A6NEE1 506 aa37■■■■□ 3.51
PPP1R3F-205ENST00000495799 MYOM3Q5VTT5 1437 aa36.99■■■■□ 3.51
PPP1R3F-205ENST00000495799 FGD6Q6ZV73 1430 aa36.95■■■■□ 3.51
PPP1R3F-205ENST00000495799 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.94■■■■□ 3.5
PPP1R3F-205ENST00000495799 KDM5BQ9UGL1 1544 aa36.94■■■■□ 3.5
PPP1R3F-205ENST00000495799 KIF14Q15058 1648 aa36.93■■■■□ 3.5
PPP1R3F-205ENST00000495799 ZCCHC11Q5TAX3 1644 aaKnown RBP36.91■■■■□ 3.5
PPP1R3F-205ENST00000495799 MIA2Q96PC5 1412 aa36.86■■■■□ 3.49
PPP1R3F-205ENST00000495799 ITSN2Q9NZM3 1697 aa36.84■■■■□ 3.49
PPP1R3F-205ENST00000495799 PTPN23Q9H3S7 1636 aa36.81■■■■□ 3.48
PPP1R3F-205ENST00000495799 FAM50AQ14320 339 aaKnown RBP36.81■■■■□ 3.48
PPP1R3F-205ENST00000495799 TCOF1Q13428 1488 aaKnown RBP36.76■■■■□ 3.48
PPP1R3F-205ENST00000495799 ABCC10Q5T3U5 1492 aa36.73■■■■□ 3.47
PPP1R3F-205ENST00000495799 RIMBP3CA6NJZ7 1639 aa36.72■■■■□ 3.47
PPP1R3F-205ENST00000495799 RIMBP3BA6NNM3 1639 aa36.72■■■■□ 3.47
PPP1R3F-205ENST00000495799 RIMBP3Q9UFD9 1639 aa36.72■■■■□ 3.47
PPP1R3F-205ENST00000495799 GPATCH8Q9UKJ3 1502 aaKnown RBP36.68■■■■□ 3.46
PPP1R3F-205ENST00000495799 CDC42BPAQ5VT25 1732 aa36.66■■■■□ 3.46
PPP1R3F-205ENST00000495799 NPM1P06748 294 aaKnown RBP eCLIP36.65■■■■□ 3.46
PPP1R3F-205ENST00000495799 ITGAEP38570 1179 aa36.63■■■■□ 3.45
PPP1R3F-205ENST00000495799 WDR7Q9Y4E6 1490 aa36.6■■■■□ 3.45
PPP1R3F-205ENST00000495799 CFDP1Q9UEE9 299 aaPredicted RBP36.59■■■■□ 3.45
PPP1R3F-205ENST00000495799 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.58■■■■□ 3.45
PPP1R3F-205ENST00000495799 PREX2Q70Z35 1606 aa36.57■■■■□ 3.45
PPP1R3F-205ENST00000495799 TTC37Q6PGP7 1564 aa36.55■■■■□ 3.44
PPP1R3F-205ENST00000495799 MYO5CQ9NQX4 1742 aa36.53■■■■□ 3.44
PPP1R3F-205ENST00000495799 CAMSAP2Q08AD1 1489 aa36.52■■■■□ 3.44
PPP1R3F-205ENST00000495799 ASXL2Q76L83 1435 aa36.51■■■■□ 3.44
PPP1R3F-205ENST00000495799 KCNH8Q96L42 1107 aa36.49■■■■□ 3.43
PPP1R3F-205ENST00000495799 DNMT1P26358 1616 aaKnown RBP36.47■■■■□ 3.43
PPP1R3F-205ENST00000495799 CDC42BPBQ9Y5S2 1711 aa36.47■■■■□ 3.43
PPP1R3F-205ENST00000495799 CYB5RLQ6IPT4 315 aa36.45■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms