RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 RIMBP3Q9UFD9 1639 aa20.04■□□□□ 0.8
CSNK1E-213ENST00000495232 PRXQ9BXM0 1461 aa20■□□□□ 0.79
CSNK1E-213ENST00000495232 KIAA0586Q9BVV6 1533 aa20■□□□□ 0.79
CSNK1E-213ENST00000495232 JPH4Q96JJ6 628 aa19.98■□□□□ 0.79
CSNK1E-213ENST00000495232 SHROOM2Q13796 1616 aa19.95■□□□□ 0.78
CSNK1E-213ENST00000495232 IQGAP2Q13576 1575 aa19.92■□□□□ 0.78
CSNK1E-213ENST00000495232 PRG4Q92954 1404 aaPredicted RBP19.92■□□□□ 0.78
CSNK1E-213ENST00000495232 CYB5RLQ6IPT4 315 aa19.91■□□□□ 0.78
CSNK1E-213ENST00000495232 CTTNBP2Q8WZ74 1663 aa19.9■□□□□ 0.78
CSNK1E-213ENST00000495232 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
CSNK1E-213ENST00000495232 KIF21BO75037 1637 aa19.87■□□□□ 0.77
CSNK1E-213ENST00000495232 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
CSNK1E-213ENST00000495232 CARMIL2Q6F5E8 1435 aa19.84■□□□□ 0.77
CSNK1E-213ENST00000495232 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.77
CSNK1E-213ENST00000495232 UBTFP17480 764 aaKnown RBP19.8■□□□□ 0.76
CSNK1E-213ENST00000495232 GOLGA3Q08378 1498 aa19.79■□□□□ 0.76
CSNK1E-213ENST00000495232 UGGT2Q9NYU1 1516 aa19.79■□□□□ 0.76
CSNK1E-213ENST00000495232 TTBK1Q5TCY1 1321 aaPredicted RBP19.75■□□□□ 0.75
CSNK1E-213ENST00000495232 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
CSNK1E-213ENST00000495232 DISP1Q96F81 1524 aa19.73■□□□□ 0.75
CSNK1E-213ENST00000495232 PTPRGP23470 1445 aa19.71■□□□□ 0.75
CSNK1E-213ENST00000495232 RANGAP1P46060 587 aaPredicted RBP19.71■□□□□ 0.75
CSNK1E-213ENST00000495232 KIAA0556O60303 1618 aa19.71■□□□□ 0.75
CSNK1E-213ENST00000495232 P3H3Q8IVL6 736 aa19.64■□□□□ 0.73
CSNK1E-213ENST00000495232 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
CSNK1E-213ENST00000495232 SAMD9Q5K651 1589 aa19.61■□□□□ 0.73
CSNK1E-213ENST00000495232 EFCAB5A4FU69 1503 aa19.59■□□□□ 0.73
CSNK1E-213ENST00000495232 ADCY10Q96PN6 1610 aa19.57■□□□□ 0.72
CSNK1E-213ENST00000495232 UACAQ9BZF9 1416 aa19.57■□□□□ 0.72
CSNK1E-213ENST00000495232 FHOD3Q2V2M9 1422 aa19.52■□□□□ 0.72
CSNK1E-213ENST00000495232 ABCC2Q92887 1545 aa19.52■□□□□ 0.72
CSNK1E-213ENST00000495232 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
CSNK1E-213ENST00000495232 UHRF1BP1LA0JNW5 1464 aa19.52■□□□□ 0.72
CSNK1E-213ENST00000495232 PLB1Q6P1J6 1458 aa19.5■□□□□ 0.71
CSNK1E-213ENST00000495232 LOC105371045A0A1W2PR82 267 aa19.48■□□□□ 0.71
CSNK1E-213ENST00000495232 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
CSNK1E-213ENST00000495232 ABCA8O94911 1581 aa19.47■□□□□ 0.71
CSNK1E-213ENST00000495232 CLIP1P30622 1438 aa19.44■□□□□ 0.7
CSNK1E-213ENST00000495232 RAPGEF6Q8TEU7 1601 aa19.43■□□□□ 0.7
CSNK1E-213ENST00000495232 FMN1Q68DA7 1419 aa19.42■□□□□ 0.7
CSNK1E-213ENST00000495232 MAPKBP1O60336 1514 aa19.42■□□□□ 0.7
CSNK1E-213ENST00000495232 KDM5BQ9UGL1 1544 aa19.42■□□□□ 0.7
CSNK1E-213ENST00000495232 ZCCHC11Q5TAX3 1644 aaKnown RBP19.4■□□□□ 0.7
CSNK1E-213ENST00000495232 ARID3CA6NKF2 412 aa19.38■□□□□ 0.69
CSNK1E-213ENST00000495232 CEP162Q5TB80 1403 aa19.38■□□□□ 0.69
CSNK1E-213ENST00000495232 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
CSNK1E-213ENST00000495232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.37■□□□□ 0.69
CSNK1E-213ENST00000495232 HNRNPUL2Q1KMD3 747 aaKnown RBP19.37■□□□□ 0.69
CSNK1E-213ENST00000495232 ASXL2Q76L83 1435 aa19.36■□□□□ 0.69
CSNK1E-213ENST00000495232 FAM69CQ0P6D2 419 aa19.33■□□□□ 0.68
CSNK1E-213ENST00000495232 ATP10BO94823 1461 aa19.33■□□□□ 0.68
CSNK1E-213ENST00000495232 NUP153P49790 1475 aaKnown RBP19.33■□□□□ 0.68
CSNK1E-213ENST00000495232 ABCC10Q5T3U5 1492 aa19.33■□□□□ 0.68
CSNK1E-213ENST00000495232 HECW1Q76N89 1606 aa19.31■□□□□ 0.68
CSNK1E-213ENST00000495232 WDR7Q9Y4E6 1490 aa19.29■□□□□ 0.68
CSNK1E-213ENST00000495232 KIF13AQ9H1H9 1805 aa19.29■□□□□ 0.68
CSNK1E-213ENST00000495232 DIP2BQ9P265 1576 aa19.28■□□□□ 0.68
CSNK1E-213ENST00000495232 KCNH8Q96L42 1107 aa19.26■□□□□ 0.67
CSNK1E-213ENST00000495232 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
CSNK1E-213ENST00000495232 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
CSNK1E-213ENST00000495232 PCF11O94913 1555 aaKnown RBP19.24■□□□□ 0.67
CSNK1E-213ENST00000495232 EPRSP07814 1512 aaKnown RBP19.24■□□□□ 0.67
CSNK1E-213ENST00000495232 CDK11AQ9UQ88 783 aaPredicted RBP19.23■□□□□ 0.67
CSNK1E-213ENST00000495232 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
CSNK1E-213ENST00000495232 CDK13Q14004 1512 aaKnown RBP19.22■□□□□ 0.67
CSNK1E-213ENST00000495232 GLI2P10070 1586 aa19.21■□□□□ 0.67
CSNK1E-213ENST00000495232 CCDC18Q5T9S5 1454 aa19.19■□□□□ 0.66
CSNK1E-213ENST00000495232 TSPOAP1O95153 1857 aa19.18■□□□□ 0.66
CSNK1E-213ENST00000495232 LRRIQ1Q96JM4 1722 aa19.15■□□□□ 0.66
CSNK1E-213ENST00000495232 VPS8Q8N3P4 1428 aa19.14■□□□□ 0.65
CSNK1E-213ENST00000495232 MAP3K4Q9Y6R4 1608 aa19.13■□□□□ 0.65
CSNK1E-213ENST00000495232 CFAP43Q8NDM7 1665 aa19.13■□□□□ 0.65
CSNK1E-213ENST00000495232 CD109Q6YHK3 1445 aa19.12■□□□□ 0.65
CSNK1E-213ENST00000495232 TEX14Q8IWB6 1497 aa19.09■□□□□ 0.65
CSNK1E-213ENST00000495232 TROQ12816 1431 aaPredicted RBP19.08■□□□□ 0.65
CSNK1E-213ENST00000495232 ABCA9Q8IUA7 1624 aa19.08■□□□□ 0.65
CSNK1E-213ENST00000495232 KIF14Q15058 1648 aa19.06■□□□□ 0.64
CSNK1E-213ENST00000495232 PPRC1Q5VV67 1664 aaKnown RBP19.05■□□□□ 0.64
CSNK1E-213ENST00000495232 APLP2Q06481 763 aa19.04■□□□□ 0.64
CSNK1E-213ENST00000495232 MAGI3Q5TCQ9 1506 aa19.04■□□□□ 0.64
CSNK1E-213ENST00000495232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.04■□□□□ 0.64
CSNK1E-213ENST00000495232 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
CSNK1E-213ENST00000495232 TTC37Q6PGP7 1564 aa19■□□□□ 0.63
CSNK1E-213ENST00000495232 KDM6BO15054 1643 aa18.99■□□□□ 0.63
CSNK1E-213ENST00000495232 TIAM1Q13009 1591 aa18.98■□□□□ 0.63
CSNK1E-213ENST00000495232 EHBP1L1Q8N3D4 1523 aa18.96■□□□□ 0.63
CSNK1E-213ENST00000495232 MYO5CQ9NQX4 1742 aa18.96■□□□□ 0.63
CSNK1E-213ENST00000495232 PHLDB1Q86UU1 1377 aa18.94■□□□□ 0.62
CSNK1E-213ENST00000495232 CFAP74Q9C0B2 1584 aa18.94■□□□□ 0.62
CSNK1E-213ENST00000495232 PLCH2O75038 1416 aa18.94■□□□□ 0.62
CSNK1E-213ENST00000495232 NEO1Q92859 1461 aa18.94■□□□□ 0.62
CSNK1E-213ENST00000495232 MAP3K1Q13233 1512 aa18.94■□□□□ 0.62
CSNK1E-213ENST00000495232 FANCAO15360 1455 aa18.93■□□□□ 0.62
CSNK1E-213ENST00000495232 EFCAB2Q5VUJ9 269 aa18.91■□□□□ 0.62
CSNK1E-213ENST00000495232 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
CSNK1E-213ENST00000495232 ARHGAP5Q13017 1502 aa18.9■□□□□ 0.62
CSNK1E-213ENST00000495232 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
CSNK1E-213ENST00000495232 SUPT6HQ7KZ85 1726 aaKnown RBP18.89■□□□□ 0.61
CSNK1E-213ENST00000495232 CCNB3Q8WWL7 1395 aa18.89■□□□□ 0.61
CSNK1E-213ENST00000495232 AKNAQ7Z591 1439 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms