RNA–Protein interactions for RNA: ENST00000495183.5

HLA-A-207, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-207ENST00000495183 EHMT2Q96KQ7 1210 aa40.17■■■■■ 4.02
HLA-A-207ENST00000495183 JPH4Q96JJ6 628 aa40.08■■■■■ 4.01
HLA-A-207ENST00000495183 GOLGA3Q08378 1498 aa40.06■■■■■ 4
HLA-A-207ENST00000495183 IQGAP2Q13576 1575 aa40.02■■■■■ 4
HLA-A-207ENST00000495183 CTTNBP2Q8WZ74 1663 aa40.01■■■■■ 4
HLA-A-207ENST00000495183 SHROOM2Q13796 1616 aa40■■■■□ 3.99
HLA-A-207ENST00000495183 UBTFP17480 764 aaKnown RBP40■■■■□ 3.99
HLA-A-207ENST00000495183 ARHGEF11O15085 1522 aa39.98■■■■□ 3.99
HLA-A-207ENST00000495183 PRG4Q92954 1404 aaPredicted RBP39.94■■■■□ 3.98
HLA-A-207ENST00000495183 RIMBP3CA6NJZ7 1639 aa39.9■■■■□ 3.98
HLA-A-207ENST00000495183 RIMBP3BA6NNM3 1639 aa39.9■■■■□ 3.98
HLA-A-207ENST00000495183 RIMBP3Q9UFD9 1639 aa39.9■■■■□ 3.98
HLA-A-207ENST00000495183 ERCC6L2Q5T890 1561 aa39.86■■■■□ 3.97
HLA-A-207ENST00000495183 UGGT2Q9NYU1 1516 aa39.82■■■■□ 3.97
HLA-A-207ENST00000495183 RANGAP1P46060 587 aaPredicted RBP39.77■■■■□ 3.96
HLA-A-207ENST00000495183 CARMIL2Q6F5E8 1435 aa39.75■■■■□ 3.95
HLA-A-207ENST00000495183 LOC105371045A0A1W2PR82 267 aa39.74■■■■□ 3.95
HLA-A-207ENST00000495183 DISP1Q96F81 1524 aa39.71■■■■□ 3.95
HLA-A-207ENST00000495183 ARAP1Q96P48 1450 aa39.7■■■■□ 3.95
HLA-A-207ENST00000495183 CYB5RLQ6IPT4 315 aa39.67■■■■□ 3.94
HLA-A-207ENST00000495183 TNIKQ9UKE5 1360 aa39.66■■■■□ 3.94
HLA-A-207ENST00000495183 KIAA0556O60303 1618 aa39.63■■■■□ 3.93
HLA-A-207ENST00000495183 P3H3Q8IVL6 736 aa39.59■■■■□ 3.93
HLA-A-207ENST00000495183 TTBK1Q5TCY1 1321 aaPredicted RBP39.59■■■■□ 3.93
HLA-A-207ENST00000495183 SAMD9Q5K651 1589 aa39.54■■■■□ 3.92
HLA-A-207ENST00000495183 PTPRGP23470 1445 aa39.53■■■■□ 3.92
HLA-A-207ENST00000495183 EFCAB5A4FU69 1503 aa39.47■■■■□ 3.91
HLA-A-207ENST00000495183 ARHGAP35Q9NRY4 1499 aa39.41■■■■□ 3.9
HLA-A-207ENST00000495183 FHOD3Q2V2M9 1422 aa39.4■■■■□ 3.9
HLA-A-207ENST00000495183 CLIP1P30622 1438 aa39.38■■■■□ 3.89
HLA-A-207ENST00000495183 CEP162Q5TB80 1403 aa39.33■■■■□ 3.89
HLA-A-207ENST00000495183 UACAQ9BZF9 1416 aa39.27■■■■□ 3.88
HLA-A-207ENST00000495183 PLB1Q6P1J6 1458 aa39.24■■■■□ 3.87
HLA-A-207ENST00000495183 ADCY10Q96PN6 1610 aa39.2■■■■□ 3.87
HLA-A-207ENST00000495183 ABCA8O94911 1581 aa39.16■■■■□ 3.86
HLA-A-207ENST00000495183 UHRF1BP1LA0JNW5 1464 aa39.16■■■■□ 3.86
HLA-A-207ENST00000495183 ABCC2Q92887 1545 aa39.16■■■■□ 3.86
HLA-A-207ENST00000495183 FMN1Q68DA7 1419 aa39.15■■■■□ 3.86
HLA-A-207ENST00000495183 NPM1P06748 294 aaKnown RBP eCLIP39.1■■■■□ 3.85
HLA-A-207ENST00000495183 RAPGEF6Q8TEU7 1601 aa39.07■■■■□ 3.84
HLA-A-207ENST00000495183 ARID3CA6NKF2 412 aa39■■■■□ 3.83
HLA-A-207ENST00000495183 ATP1B4Q9UN42 357 aaPredicted RBP38.99■■■■□ 3.83
HLA-A-207ENST00000495183 KDM5BQ9UGL1 1544 aa38.98■■■■□ 3.83
HLA-A-207ENST00000495183 NUP153P49790 1475 aaKnown RBP38.96■■■■□ 3.83
HLA-A-207ENST00000495183 ZCCHC11Q5TAX3 1644 aaKnown RBP38.9■■■■□ 3.82
HLA-A-207ENST00000495183 CASKIN1Q8WXD9 1431 aa38.9■■■■□ 3.82
HLA-A-207ENST00000495183 ATP10BO94823 1461 aa38.89■■■■□ 3.82
HLA-A-207ENST00000495183 PCF11O94913 1555 aaKnown RBP38.88■■■■□ 3.81
HLA-A-207ENST00000495183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.86■■■■□ 3.81
HLA-A-207ENST00000495183 HNRNPUL2Q1KMD3 747 aaKnown RBP38.86■■■■□ 3.81
HLA-A-207ENST00000495183 HECW1Q76N89 1606 aa38.86■■■■□ 3.81
HLA-A-207ENST00000495183 MAPKBP1O60336 1514 aa38.83■■■■□ 3.81
HLA-A-207ENST00000495183 FYCO1Q9BQS8 1478 aa38.82■■■■□ 3.8
HLA-A-207ENST00000495183 VPS8Q8N3P4 1428 aa38.81■■■■□ 3.8
HLA-A-207ENST00000495183 ASXL2Q76L83 1435 aa38.79■■■■□ 3.8
HLA-A-207ENST00000495183 EPRSP07814 1512 aaKnown RBP38.78■■■■□ 3.8
HLA-A-207ENST00000495183 CDK13Q14004 1512 aaKnown RBP38.75■■■■□ 3.79
HLA-A-207ENST00000495183 TRHP20396 242 aaPredicted RBP38.69■■■■□ 3.78
HLA-A-207ENST00000495183 LRRIQ1Q96JM4 1722 aa38.68■■■■□ 3.78
HLA-A-207ENST00000495183 CCDC18Q5T9S5 1454 aa38.67■■■■□ 3.78
HLA-A-207ENST00000495183 WDR7Q9Y4E6 1490 aa38.66■■■■□ 3.78
HLA-A-207ENST00000495183 PLEKHD1A6NEE1 506 aa38.65■■■■□ 3.78
HLA-A-207ENST00000495183 ABCC10Q5T3U5 1492 aa38.61■■■■□ 3.77
HLA-A-207ENST00000495183 KCNH8Q96L42 1107 aa38.61■■■■□ 3.77
HLA-A-207ENST00000495183 CDK11AQ9UQ88 783 aaPredicted RBP38.61■■■■□ 3.77
HLA-A-207ENST00000495183 FAM69CQ0P6D2 419 aa38.58■■■■□ 3.77
HLA-A-207ENST00000495183 DIP2BQ9P265 1576 aa38.54■■■■□ 3.76
HLA-A-207ENST00000495183 KIF13AQ9H1H9 1805 aa38.48■■■■□ 3.75
HLA-A-207ENST00000495183 TROQ12816 1431 aaPredicted RBP38.45■■■■□ 3.75
HLA-A-207ENST00000495183 APLP2Q06481 763 aa38.44■■■■□ 3.74
HLA-A-207ENST00000495183 GLI2P10070 1586 aa38.43■■■■□ 3.74
HLA-A-207ENST00000495183 MAGI3Q5TCQ9 1506 aa38.42■■■■□ 3.74
HLA-A-207ENST00000495183 TIAM1Q13009 1591 aa38.41■■■■□ 3.74
HLA-A-207ENST00000495183 CFAP43Q8NDM7 1665 aa38.39■■■■□ 3.74
HLA-A-207ENST00000495183 MTUS2Q5JR59 1369 aa38.38■■■■□ 3.73
HLA-A-207ENST00000495183 MAP3K1Q13233 1512 aa38.36■■■■□ 3.73
HLA-A-207ENST00000495183 KIF14Q15058 1648 aa38.29■■■■□ 3.72
HLA-A-207ENST00000495183 ABCA9Q8IUA7 1624 aa38.29■■■■□ 3.72
HLA-A-207ENST00000495183 CD109Q6YHK3 1445 aa38.29■■■■□ 3.72
HLA-A-207ENST00000495183 MAP3K4Q9Y6R4 1608 aa38.28■■■■□ 3.72
HLA-A-207ENST00000495183 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.28■■■■□ 3.72
HLA-A-207ENST00000495183 KANK4Q5T7N3 995 aaPredicted RBP38.28■■■■□ 3.72
HLA-A-207ENST00000495183 EHBP1L1Q8N3D4 1523 aa38.26■■■■□ 3.72
HLA-A-207ENST00000495183 LRRC9Q6ZRR7 1453 aa38.26■■■■□ 3.72
HLA-A-207ENST00000495183 TSPOAP1O95153 1857 aa38.23■■■■□ 3.71
HLA-A-207ENST00000495183 TTC37Q6PGP7 1564 aa38.22■■■■□ 3.71
HLA-A-207ENST00000495183 PPRC1Q5VV67 1664 aaKnown RBP38.12■■■■□ 3.69
HLA-A-207ENST00000495183 SUPT6HQ7KZ85 1726 aaKnown RBP38.09■■■■□ 3.69
HLA-A-207ENST00000495183 TEX14Q8IWB6 1497 aa38.09■■■■□ 3.69
HLA-A-207ENST00000495183 PLCH2O75038 1416 aa38.08■■■■□ 3.69
HLA-A-207ENST00000495183 NCOA2Q15596 1464 aa38.07■■■■□ 3.69
HLA-A-207ENST00000495183 CCNB3Q8WWL7 1395 aa38.05■■■■□ 3.68
HLA-A-207ENST00000495183 MYO5CQ9NQX4 1742 aa38.05■■■■□ 3.68
HLA-A-207ENST00000495183 PPARGC1BQ86YN6 1023 aaKnown RBP38.02■■■■□ 3.68
HLA-A-207ENST00000495183 GPATCH8Q9UKJ3 1502 aaKnown RBP38■■■■□ 3.67
HLA-A-207ENST00000495183 FANCAO15360 1455 aa37.98■■■■□ 3.67
HLA-A-207ENST00000495183 CDC42BPAQ5VT25 1732 aa37.97■■■■□ 3.67
HLA-A-207ENST00000495183 EFCAB2Q5VUJ9 269 aa37.97■■■■□ 3.67
HLA-A-207ENST00000495183 ARHGAP5Q13017 1502 aa37.97■■■■□ 3.67
HLA-A-207ENST00000495183 ARAP3Q8WWN8 1544 aa37.96■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms