RNA–Protein interactions for RNA: ENST00000495175.6

TRIT1-213, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best)

Gene TRIT1, Length 1,156 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-213ENST00000495175 SHROOM2Q13796 1616 aa18.58■□□□□ 0.56
TRIT1-213ENST00000495175 KIAA0586Q9BVV6 1533 aa18.55■□□□□ 0.56
TRIT1-213ENST00000495175 CTTNBP2Q8WZ74 1663 aa18.51■□□□□ 0.55
TRIT1-213ENST00000495175 IQGAP2Q13576 1575 aa18.48■□□□□ 0.55
TRIT1-213ENST00000495175 ARHGEF11O15085 1522 aa18.48■□□□□ 0.55
TRIT1-213ENST00000495175 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
TRIT1-213ENST00000495175 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.55
TRIT1-213ENST00000495175 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
TRIT1-213ENST00000495175 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
TRIT1-213ENST00000495175 GOLGA3Q08378 1498 aa18.46■□□□□ 0.54
TRIT1-213ENST00000495175 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
TRIT1-213ENST00000495175 JPH4Q96JJ6 628 aa18.41■□□□□ 0.54
TRIT1-213ENST00000495175 PRG4Q92954 1404 aaPredicted RBP18.39■□□□□ 0.53
TRIT1-213ENST00000495175 DISP1Q96F81 1524 aa18.39■□□□□ 0.53
TRIT1-213ENST00000495175 ARAP1Q96P48 1450 aa18.37■□□□□ 0.53
TRIT1-213ENST00000495175 KIAA0556O60303 1618 aa18.34■□□□□ 0.53
TRIT1-213ENST00000495175 SAMD9Q5K651 1589 aa18.34■□□□□ 0.53
TRIT1-213ENST00000495175 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
TRIT1-213ENST00000495175 TNIKQ9UKE5 1360 aa18.28■□□□□ 0.52
TRIT1-213ENST00000495175 CARMIL2Q6F5E8 1435 aa18.25■□□□□ 0.51
TRIT1-213ENST00000495175 UBTFP17480 764 aaKnown RBP18.25■□□□□ 0.51
TRIT1-213ENST00000495175 EFCAB5A4FU69 1503 aa18.24■□□□□ 0.51
TRIT1-213ENST00000495175 SENP3Q9H4L4 574 aaPredicted RBP18.23■□□□□ 0.51
TRIT1-213ENST00000495175 LOC105371045A0A1W2PR82 267 aa18.22■□□□□ 0.51
TRIT1-213ENST00000495175 ARHGAP35Q9NRY4 1499 aa18.21■□□□□ 0.51
TRIT1-213ENST00000495175 PTPRGP23470 1445 aa18.17■□□□□ 0.5
TRIT1-213ENST00000495175 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
TRIT1-213ENST00000495175 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
TRIT1-213ENST00000495175 ADCY10Q96PN6 1610 aa18.16■□□□□ 0.5
TRIT1-213ENST00000495175 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
TRIT1-213ENST00000495175 ABCA8O94911 1581 aa18.14■□□□□ 0.49
TRIT1-213ENST00000495175 CLIP1P30622 1438 aa18.12■□□□□ 0.49
TRIT1-213ENST00000495175 CEP162Q5TB80 1403 aa18.12■□□□□ 0.49
TRIT1-213ENST00000495175 UHRF1BP1LA0JNW5 1464 aa18.12■□□□□ 0.49
TRIT1-213ENST00000495175 P3H3Q8IVL6 736 aa18.11■□□□□ 0.49
TRIT1-213ENST00000495175 ABCC2Q92887 1545 aa18.1■□□□□ 0.49
TRIT1-213ENST00000495175 PLB1Q6P1J6 1458 aa18.1■□□□□ 0.49
TRIT1-213ENST00000495175 RANGAP1P46060 587 aaPredicted RBP18.1■□□□□ 0.49
TRIT1-213ENST00000495175 UACAQ9BZF9 1416 aa18.09■□□□□ 0.49
TRIT1-213ENST00000495175 RAPGEF6Q8TEU7 1601 aa18.05■□□□□ 0.48
TRIT1-213ENST00000495175 KDM5BQ9UGL1 1544 aa18.03■□□□□ 0.48
TRIT1-213ENST00000495175 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
TRIT1-213ENST00000495175 NUP153P49790 1475 aaKnown RBP18.01■□□□□ 0.47
TRIT1-213ENST00000495175 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
TRIT1-213ENST00000495175 ZCCHC11Q5TAX3 1644 aaKnown RBP17.99■□□□□ 0.47
TRIT1-213ENST00000495175 PCF11O94913 1555 aaKnown RBP17.99■□□□□ 0.47
TRIT1-213ENST00000495175 LRRIQ1Q96JM4 1722 aa17.98■□□□□ 0.47
TRIT1-213ENST00000495175 MAPKBP1O60336 1514 aa17.98■□□□□ 0.47
TRIT1-213ENST00000495175 ATP10BO94823 1461 aa17.95■□□□□ 0.46
TRIT1-213ENST00000495175 CASKIN1Q8WXD9 1431 aa17.95■□□□□ 0.46
TRIT1-213ENST00000495175 HECW1Q76N89 1606 aa17.94■□□□□ 0.46
TRIT1-213ENST00000495175 FYCO1Q9BQS8 1478 aa17.92■□□□□ 0.46
TRIT1-213ENST00000495175 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
TRIT1-213ENST00000495175 VPS8Q8N3P4 1428 aa17.89■□□□□ 0.45
TRIT1-213ENST00000495175 CDK13Q14004 1512 aaKnown RBP17.88■□□□□ 0.45
TRIT1-213ENST00000495175 ASXL2Q76L83 1435 aa17.88■□□□□ 0.45
TRIT1-213ENST00000495175 KIF13AQ9H1H9 1805 aa17.85■□□□□ 0.45
TRIT1-213ENST00000495175 DIP2BQ9P265 1576 aa17.85■□□□□ 0.45
TRIT1-213ENST00000495175 WDR7Q9Y4E6 1490 aa17.84■□□□□ 0.45
TRIT1-213ENST00000495175 ABCC10Q5T3U5 1492 aa17.83■□□□□ 0.45
TRIT1-213ENST00000495175 CCDC18Q5T9S5 1454 aa17.82■□□□□ 0.44
TRIT1-213ENST00000495175 ARID3CA6NKF2 412 aa17.82■□□□□ 0.44
TRIT1-213ENST00000495175 NPM1P06748 294 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRIT1-213ENST00000495175 MAGI3Q5TCQ9 1506 aa17.81■□□□□ 0.44
TRIT1-213ENST00000495175 GLI2P10070 1586 aa17.8■□□□□ 0.44
TRIT1-213ENST00000495175 CFAP43Q8NDM7 1665 aa17.79■□□□□ 0.44
TRIT1-213ENST00000495175 TIAM1Q13009 1591 aa17.75■□□□□ 0.43
TRIT1-213ENST00000495175 MAP3K1Q13233 1512 aa17.75■□□□□ 0.43
TRIT1-213ENST00000495175 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
TRIT1-213ENST00000495175 ABCA9Q8IUA7 1624 aa17.73■□□□□ 0.43
TRIT1-213ENST00000495175 TROQ12816 1431 aaPredicted RBP17.72■□□□□ 0.43
TRIT1-213ENST00000495175 PPRC1Q5VV67 1664 aaKnown RBP17.72■□□□□ 0.43
TRIT1-213ENST00000495175 ATP1B4Q9UN42 357 aaPredicted RBP17.72■□□□□ 0.43
TRIT1-213ENST00000495175 KIF14Q15058 1648 aa17.72■□□□□ 0.43
TRIT1-213ENST00000495175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■■■■■ 51.7
TRIT1-213ENST00000495175 TTC37Q6PGP7 1564 aa17.69■□□□□ 0.42
TRIT1-213ENST00000495175 PLEKHD1A6NEE1 506 aa17.68■□□□□ 0.42
TRIT1-213ENST00000495175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
TRIT1-213ENST00000495175 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
TRIT1-213ENST00000495175 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
TRIT1-213ENST00000495175 EHBP1L1Q8N3D4 1523 aa17.67■□□□□ 0.42
TRIT1-213ENST00000495175 LRRC9Q6ZRR7 1453 aa17.65■□□□□ 0.42
TRIT1-213ENST00000495175 KCNH8Q96L42 1107 aa17.64■□□□□ 0.41
TRIT1-213ENST00000495175 CDK11AQ9UQ88 783 aaPredicted RBP17.64■□□□□ 0.41
TRIT1-213ENST00000495175 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
TRIT1-213ENST00000495175 KANK4Q5T7N3 995 aaPredicted RBP17.61■□□□□ 0.41
TRIT1-213ENST00000495175 TSPOAP1O95153 1857 aa17.61■□□□□ 0.41
TRIT1-213ENST00000495175 CD109Q6YHK3 1445 aa17.6■□□□□ 0.41
TRIT1-213ENST00000495175 MTUS2Q5JR59 1369 aa17.59■□□□□ 0.41
TRIT1-213ENST00000495175 ARAP3Q8WWN8 1544 aa17.58■□□□□ 0.41
TRIT1-213ENST00000495175 CDC42BPAQ5VT25 1732 aa17.58■□□□□ 0.4
TRIT1-213ENST00000495175 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.4
TRIT1-213ENST00000495175 PREX2Q70Z35 1606 aa17.58■□□□□ 0.4
TRIT1-213ENST00000495175 SUPT6HQ7KZ85 1726 aaKnown RBP17.57■□□□□ 0.4
TRIT1-213ENST00000495175 PLCH2O75038 1416 aa17.56■□□□□ 0.4
TRIT1-213ENST00000495175 CDC42BPBQ9Y5S2 1711 aa17.56■□□□□ 0.4
TRIT1-213ENST00000495175 NCOA2Q15596 1464 aa17.56■□□□□ 0.4
TRIT1-213ENST00000495175 GPATCH8Q9UKJ3 1502 aaKnown RBP17.54■□□□□ 0.4
TRIT1-213ENST00000495175 TEX14Q8IWB6 1497 aa17.52■□□□□ 0.4
TRIT1-213ENST00000495175 NEO1Q92859 1461 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms