RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 PDS5BQ9NTI5 1447 aa8.83□□□□□ -1
RUNX1-217ENST00000494829 CCER1Q8TC90 406 aaPredicted RBP8.81□□□□□ -1
RUNX1-217ENST00000494829 FHOD3Q2V2M9 1422 aa8.81□□□□□ -1
RUNX1-217ENST00000494829 AQRO60306 1485 aaKnown RBP eCLIP8.8□□□□□ -1
RUNX1-217ENST00000494829 GAPVD1Q14C86 1478 aa8.8□□□□□ -1
RUNX1-217ENST00000494829 PCF11O94913 1555 aaKnown RBP8.8□□□□□ -1
RUNX1-217ENST00000494829 CUL7Q14999 1698 aa8.8□□□□□ -1
RUNX1-217ENST00000494829 CTTNBP2Q8WZ74 1663 aa8.8□□□□□ -1
RUNX1-217ENST00000494829 ZNF608Q9ULD9 1512 aaPredicted RBP8.8□□□□□ -1
RUNX1-217ENST00000494829 LRRIQ1Q96JM4 1722 aa8.79□□□□□ -1
RUNX1-217ENST00000494829 PBRM1Q86U86 1689 aa8.78□□□□□ -1
RUNX1-217ENST00000494829 TIAM1Q13009 1591 aa8.77□□□□□ -1.01
RUNX1-217ENST00000494829 MRC2Q9UBG0 1479 aa8.77□□□□□ -1.01
RUNX1-217ENST00000494829 ZEB1P37275 1124 aaPredicted RBP8.76□□□□□ -1.01
RUNX1-217ENST00000494829 PPP4R3CPQ6ZMV5 832 aa8.75□□□□□ -1.01
RUNX1-217ENST00000494829 APLP2Q06481 763 aa8.74□□□□□ -1.01
RUNX1-217ENST00000494829 WDR62O43379 1518 aa8.74□□□□□ -1.01
RUNX1-217ENST00000494829 RRBP1Q9P2E9 1410 aaKnown RBP8.74□□□□□ -1.01
RUNX1-217ENST00000494829 CFAP43Q8NDM7 1665 aa8.74□□□□□ -1.01
RUNX1-217ENST00000494829 SAMD9Q5K651 1589 aa8.74□□□□□ -1.01
RUNX1-217ENST00000494829 PHLDB1Q86UU1 1377 aa8.73□□□□□ -1.01
RUNX1-217ENST00000494829 SNAPC4Q5SXM2 1469 aa8.73□□□□□ -1.01
RUNX1-217ENST00000494829 LRRC9Q6ZRR7 1453 aa8.73□□□□□ -1.01
RUNX1-217ENST00000494829 THOC2Q8NI27 1593 aaKnown RBP8.73□□□□□ -1.01
RUNX1-217ENST00000494829 ADAMTS12P58397 1594 aa8.72□□□□□ -1.01
RUNX1-217ENST00000494829 EIF4G3O43432 1585 aaKnown RBP8.7□□□□□ -1.02
RUNX1-217ENST00000494829 EFCAB5A4FU69 1503 aa8.7□□□□□ -1.02
RUNX1-217ENST00000494829 ATP1B4Q9UN42 357 aaPredicted RBP8.69□□□□□ -1.02
RUNX1-217ENST00000494829 ITGAEP38570 1179 aa8.69□□□□□ -1.02
RUNX1-217ENST00000494829 MAP3K1Q13233 1512 aa8.69□□□□□ -1.02
RUNX1-217ENST00000494829 MAGI3Q5TCQ9 1506 aa8.69□□□□□ -1.02
RUNX1-217ENST00000494829 CCNB3Q8WWL7 1395 aa8.68□□□□□ -1.02
RUNX1-217ENST00000494829 CASKIN1Q8WXD9 1431 aa8.68□□□□□ -1.02
RUNX1-217ENST00000494829 FYCO1Q9BQS8 1478 aa8.67□□□□□ -1.02
RUNX1-217ENST00000494829 DHX57Q6P158 1386 aaKnown RBP8.67□□□□□ -1.02
RUNX1-217ENST00000494829 GRIN2BQ13224 1484 aa8.67□□□□□ -1.02
RUNX1-217ENST00000494829 FHAD1B1AJZ9 1412 aa8.67□□□□□ -1.02
RUNX1-217ENST00000494829 IFT140Q96RY7 1462 aa8.66□□□□□ -1.02
RUNX1-217ENST00000494829 ERCC6Q03468 1493 aa8.66□□□□□ -1.02
RUNX1-217ENST00000494829 IQGAP2Q13576 1575 aa8.64□□□□□ -1.03
RUNX1-217ENST00000494829 ARID3CA6NKF2 412 aa8.63□□□□□ -1.03
RUNX1-217ENST00000494829 DISP1Q96F81 1524 aa8.62□□□□□ -1.03
RUNX1-217ENST00000494829 CEP170Q5SW79 1584 aa8.62□□□□□ -1.03
RUNX1-217ENST00000494829 PTPRKQ15262 1439 aa8.62□□□□□ -1.03
RUNX1-217ENST00000494829 CDK13Q14004 1512 aaKnown RBP8.62□□□□□ -1.03
RUNX1-217ENST00000494829 FMN1Q68DA7 1419 aa8.61□□□□□ -1.03
RUNX1-217ENST00000494829 MAPKBP1O60336 1514 aa8.61□□□□□ -1.03
RUNX1-217ENST00000494829 GRIN2AQ12879 1464 aa8.61□□□□□ -1.03
RUNX1-217ENST00000494829 RAB3GAP2Q9H2M9 1393 aa8.61□□□□□ -1.03
RUNX1-217ENST00000494829 NCBP3Q53F19 620 aaKnown RBP8.61□□□□□ -1.03
RUNX1-217ENST00000494829 FAM50AQ14320 339 aaKnown RBP8.6□□□□□ -1.03
RUNX1-217ENST00000494829 UGGT2Q9NYU1 1516 aa8.59□□□□□ -1.03
RUNX1-217ENST00000494829 SLC4A1APQ9BWU0 796 aaKnown RBP8.59□□□□□ -1.03
RUNX1-217ENST00000494829 KIAA0556O60303 1618 aa8.59□□□□□ -1.04
RUNX1-217ENST00000494829 NCOA2Q15596 1464 aa8.58□□□□□ -1.04
RUNX1-217ENST00000494829 ARHGEF11O15085 1522 aa8.58□□□□□ -1.04
RUNX1-217ENST00000494829 PIAS4Q8N2W9 510 aaPredicted RBP8.58□□□□□ -1.04
RUNX1-217ENST00000494829 FGD6Q6ZV73 1430 aa8.57□□□□□ -1.04
RUNX1-217ENST00000494829 NPM3O75607 178 aaKnown RBP8.57□□□□□ -1.04
RUNX1-217ENST00000494829 EPRSP07814 1512 aaKnown RBP8.57□□□□□ -1.04
RUNX1-217ENST00000494829 KIAA0586Q9BVV6 1533 aa8.56□□□□□ -1.04
RUNX1-217ENST00000494829 MTUS2Q5JR59 1369 aa8.55□□□□□ -1.04
RUNX1-217ENST00000494829 NUP153P49790 1475 aaKnown RBP8.55□□□□□ -1.04
RUNX1-217ENST00000494829 FBLN2P98095 1184 aa8.54□□□□□ -1.04
RUNX1-217ENST00000494829 SYNJ2O15056 1496 aa8.54□□□□□ -1.04
RUNX1-217ENST00000494829 HECW1Q76N89 1606 aa8.54□□□□□ -1.04
RUNX1-217ENST00000494829 MAGI1Q96QZ7 1491 aaPredicted RBP8.54□□□□□ -1.04
RUNX1-217ENST00000494829 SUPT6HQ7KZ85 1726 aaKnown RBP8.54□□□□□ -1.04
RUNX1-217ENST00000494829 KDM6BO15054 1643 aa8.54□□□□□ -1.04
RUNX1-217ENST00000494829 SETD5Q9C0A6 1442 aa8.54□□□□□ -1.04
RUNX1-217ENST00000494829 PLB1Q6P1J6 1458 aa8.53□□□□□ -1.04
RUNX1-217ENST00000494829 EHBP1L1Q8N3D4 1523 aa8.53□□□□□ -1.04
RUNX1-217ENST00000494829 DIEXFQ68CQ4 756 aaKnown RBP8.53□□□□□ -1.04
RUNX1-217ENST00000494829 SIN3AQ96ST3 1273 aa8.53□□□□□ -1.04
RUNX1-217ENST00000494829 MYOM3Q5VTT5 1437 aa8.53□□□□□ -1.04
RUNX1-217ENST00000494829 PTPN23Q9H3S7 1636 aa8.52□□□□□ -1.04
RUNX1-217ENST00000494829 ZNF316A6NFI3 1004 aaPredicted RBP8.52□□□□□ -1.05
RUNX1-217ENST00000494829 NUP160Q12769 1436 aa8.52□□□□□ -1.05
RUNX1-217ENST00000494829 CHMP7Q8WUX9 453 aaPredicted RBP8.52□□□□□ -1.05
RUNX1-217ENST00000494829 RAPGEF6Q8TEU7 1601 aa8.51□□□□□ -1.05
RUNX1-217ENST00000494829 DENND4BO75064 1496 aaPredicted RBP8.5□□□□□ -1.05
RUNX1-217ENST00000494829 CCDC18Q5T9S5 1454 aa8.5□□□□□ -1.05
RUNX1-217ENST00000494829 ZNF644Q9H582 1327 aaPredicted RBP8.5□□□□□ -1.05
RUNX1-217ENST00000494829 CHD1O14646 1710 aa8.49□□□□□ -1.05
RUNX1-217ENST00000494829 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.49□□□□□ -1.05
RUNX1-217ENST00000494829 PRG4Q92954 1404 aaPredicted RBP8.49□□□□□ -1.05
RUNX1-217ENST00000494829 KIF14Q15058 1648 aa8.49□□□□□ -1.05
RUNX1-217ENST00000494829 NAIPQ13075 1403 aa8.49□□□□□ -1.05
RUNX1-217ENST00000494829 CNKSR2Q8WXI2 1034 aa8.48□□□□□ -1.05
RUNX1-217ENST00000494829 ERCC6L2Q5T890 1561 aa8.48□□□□□ -1.05
RUNX1-217ENST00000494829 JPH4Q96JJ6 628 aa8.48□□□□□ -1.05
RUNX1-217ENST00000494829 CHIC2Q9UKJ5 165 aa8.48□□□□□ -1.05
RUNX1-217ENST00000494829 TCOF1Q13428 1488 aaKnown RBP8.48□□□□□ -1.05
RUNX1-217ENST00000494829 CLSPNQ9HAW4 1339 aa8.46□□□□□ -1.05
RUNX1-217ENST00000494829 HFM1A2PYH4 1435 aa8.46□□□□□ -1.05
RUNX1-217ENST00000494829 MIER1Q8N108 512 aa8.46□□□□□ -1.06
RUNX1-217ENST00000494829 RRP7BPQ9NSQ0 103 aa8.46□□□□□ -1.06
RUNX1-217ENST00000494829 NEUROD1Q13562 356 aa8.45□□□□□ -1.06
RUNX1-217ENST00000494829 ABCA8O94911 1581 aa8.44□□□□□ -1.06
RUNX1-217ENST00000494829 ZBTB22O15209 634 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms