RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ITGAEP38570 1179 aa15.75■□□□□ 0.11
SAMM50-206ENST00000494795 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
SAMM50-206ENST00000494795 TARBP1Q13395 1621 aaKnown RBP15.74■□□□□ 0.11
SAMM50-206ENST00000494795 ZNF608Q9ULD9 1512 aaPredicted RBP15.72■□□□□ 0.11
SAMM50-206ENST00000494795 MRC2Q9UBG0 1479 aa15.68■□□□□ 0.1
SAMM50-206ENST00000494795 PCF11O94913 1555 aaKnown RBP15.68■□□□□ 0.1
SAMM50-206ENST00000494795 CUL7Q14999 1698 aa15.68■□□□□ 0.1
SAMM50-206ENST00000494795 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
SAMM50-206ENST00000494795 TIAM1Q13009 1591 aa15.64■□□□□ 0.09
SAMM50-206ENST00000494795 PHLDB1Q86UU1 1377 aa15.64■□□□□ 0.09
SAMM50-206ENST00000494795 CTTNBP2Q8WZ74 1663 aa15.63■□□□□ 0.09
SAMM50-206ENST00000494795 ARID3CA6NKF2 412 aa15.63■□□□□ 0.09
SAMM50-206ENST00000494795 KCNA4P22459 653 aa15.63■□□□□ 0.09
SAMM50-206ENST00000494795 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
SAMM50-206ENST00000494795 LRRC9Q6ZRR7 1453 aa15.61■□□□□ 0.09
SAMM50-206ENST00000494795 RRBP1Q9P2E9 1410 aaKnown RBP15.6■□□□□ 0.09
SAMM50-206ENST00000494795 CCNB3Q8WWL7 1395 aa15.6■□□□□ 0.09
SAMM50-206ENST00000494795 PBRM1Q86U86 1689 aa15.59■□□□□ 0.09
SAMM50-206ENST00000494795 FAM50AQ14320 339 aaKnown RBP15.56■□□□□ 0.08
SAMM50-206ENST00000494795 FHAD1B1AJZ9 1412 aa15.56■□□□□ 0.08
SAMM50-206ENST00000494795 WDR62O43379 1518 aa15.56■□□□□ 0.08
SAMM50-206ENST00000494795 SNAPC4Q5SXM2 1469 aa15.54■□□□□ 0.08
SAMM50-206ENST00000494795 LRRIQ1Q96JM4 1722 aa15.53■□□□□ 0.08
SAMM50-206ENST00000494795 CASKIN1Q8WXD9 1431 aa15.53■□□□□ 0.08
SAMM50-206ENST00000494795 ADAMTS12P58397 1594 aa15.52■□□□□ 0.08
SAMM50-206ENST00000494795 EFCAB5A4FU69 1503 aa15.52■□□□□ 0.08
SAMM50-206ENST00000494795 DHX57Q6P158 1386 aaKnown RBP15.52■□□□□ 0.08
SAMM50-206ENST00000494795 GRIN2BQ13224 1484 aa15.52■□□□□ 0.07
SAMM50-206ENST00000494795 FBLN2P98095 1184 aa15.52■□□□□ 0.07
SAMM50-206ENST00000494795 SAMD9Q5K651 1589 aa15.51■□□□□ 0.07
SAMM50-206ENST00000494795 SLC24A1O60721 1099 aa15.51■□□□□ 0.07
SAMM50-206ENST00000494795 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
SAMM50-206ENST00000494795 CFAP43Q8NDM7 1665 aa15.5■□□□□ 0.07
SAMM50-206ENST00000494795 FYCO1Q9BQS8 1478 aa15.5■□□□□ 0.07
SAMM50-206ENST00000494795 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
SAMM50-206ENST00000494795 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
SAMM50-206ENST00000494795 MAP3K1Q13233 1512 aa15.48■□□□□ 0.07
SAMM50-206ENST00000494795 FMN1Q68DA7 1419 aa15.47■□□□□ 0.07
SAMM50-206ENST00000494795 RAB3GAP2Q9H2M9 1393 aa15.45■□□□□ 0.06
SAMM50-206ENST00000494795 MAGI3Q5TCQ9 1506 aa15.45■□□□□ 0.06
SAMM50-206ENST00000494795 IQGAP2Q13576 1575 aa15.44■□□□□ 0.06
SAMM50-206ENST00000494795 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
SAMM50-206ENST00000494795 DIEXFQ68CQ4 756 aaKnown RBP15.41■□□□□ 0.06
SAMM50-206ENST00000494795 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
SAMM50-206ENST00000494795 CDK13Q14004 1512 aaKnown RBP15.41■□□□□ 0.06
SAMM50-206ENST00000494795 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
SAMM50-206ENST00000494795 PTPRKQ15262 1439 aa15.39■□□□□ 0.05
SAMM50-206ENST00000494795 DISP1Q96F81 1524 aa15.37■□□□□ 0.05
SAMM50-206ENST00000494795 ZNF316A6NFI3 1004 aaPredicted RBP15.37■□□□□ 0.05
SAMM50-206ENST00000494795 NCOA2Q15596 1464 aa15.36■□□□□ 0.05
SAMM50-206ENST00000494795 FGD6Q6ZV73 1430 aa15.36■□□□□ 0.05
SAMM50-206ENST00000494795 ADRA2BP18089 450 aa15.36■□□□□ 0.05
SAMM50-206ENST00000494795 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
SAMM50-206ENST00000494795 CEP170Q5SW79 1584 aa15.35■□□□□ 0.05
SAMM50-206ENST00000494795 SETD5Q9C0A6 1442 aa15.34■□□□□ 0.05
SAMM50-206ENST00000494795 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
SAMM50-206ENST00000494795 CHIC2Q9UKJ5 165 aa15.33■□□□□ 0.04
SAMM50-206ENST00000494795 MAPKBP1O60336 1514 aa15.32■□□□□ 0.04
SAMM50-206ENST00000494795 EPRSP07814 1512 aaKnown RBP15.32■□□□□ 0.04
SAMM50-206ENST00000494795 UGGT2Q9NYU1 1516 aa15.32■□□□□ 0.04
SAMM50-206ENST00000494795 NEUROD1Q13562 356 aa15.3■□□□□ 0.04
SAMM50-206ENST00000494795 KIAA0556O60303 1618 aa15.3■□□□□ 0.04
SAMM50-206ENST00000494795 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
SAMM50-206ENST00000494795 PLB1Q6P1J6 1458 aa15.28■□□□□ 0.04
SAMM50-206ENST00000494795 JPH4Q96JJ6 628 aa15.28■□□□□ 0.04
SAMM50-206ENST00000494795 MYOM3Q5VTT5 1437 aa15.28■□□□□ 0.04
SAMM50-206ENST00000494795 MAGI1Q96QZ7 1491 aaPredicted RBP15.28■□□□□ 0.04
SAMM50-206ENST00000494795 ZNF644Q9H582 1327 aaPredicted RBP15.27■□□□□ 0.04
SAMM50-206ENST00000494795 RRP7BPQ9NSQ0 103 aa15.27■□□□□ 0.04
SAMM50-206ENST00000494795 NUP153P49790 1475 aaKnown RBP15.27■□□□□ 0.03
SAMM50-206ENST00000494795 HECW1Q76N89 1606 aa15.25■□□□□ 0.03
SAMM50-206ENST00000494795 SUPT6HQ7KZ85 1726 aaKnown RBP15.24■□□□□ 0.03
SAMM50-206ENST00000494795 EHBP1L1Q8N3D4 1523 aa15.24■□□□□ 0.03
SAMM50-206ENST00000494795 ARHGEF11O15085 1522 aa15.23■□□□□ 0.03
SAMM50-206ENST00000494795 MIER1Q8N108 512 aa15.23■□□□□ 0.03
SAMM50-206ENST00000494795 PRG4Q92954 1404 aaPredicted RBP15.22■□□□□ 0.03
SAMM50-206ENST00000494795 CLSPNQ9HAW4 1339 aa15.22■□□□□ 0.03
SAMM50-206ENST00000494795 CCDC18Q5T9S5 1454 aa15.21■□□□□ 0.03
SAMM50-206ENST00000494795 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.03
SAMM50-206ENST00000494795 NUP160Q12769 1436 aa15.21■□□□□ 0.03
SAMM50-206ENST00000494795 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.18■□□□□ 0.02
SAMM50-206ENST00000494795 NAIPQ13075 1403 aa15.18■□□□□ 0.02
SAMM50-206ENST00000494795 RAPGEF6Q8TEU7 1601 aa15.18■□□□□ 0.02
SAMM50-206ENST00000494795 HIRIP3Q9BW71 556 aaPredicted RBP15.18■□□□□ 0.02
SAMM50-206ENST00000494795 KDM6BO15054 1643 aa15.17■□□□□ 0.02
SAMM50-206ENST00000494795 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
SAMM50-206ENST00000494795 HFM1A2PYH4 1435 aa15.15■□□□□ 0.02
SAMM50-206ENST00000494795 FOXD1Q16676 465 aa15.15■□□□□ 0.02
SAMM50-206ENST00000494795 ZNF777Q9ULD5 760 aaPredicted RBP15.14■□□□□ 0.01
SAMM50-206ENST00000494795 KIF14Q15058 1648 aa15.12■□□□□ 0.01
SAMM50-206ENST00000494795 TCOF1Q13428 1488 aaKnown RBP15.1■□□□□ 0.01
SAMM50-206ENST00000494795 ERCC6L2Q5T890 1561 aa15.1■□□□□ 0.01
SAMM50-206ENST00000494795 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
SAMM50-206ENST00000494795 CHD1O14646 1710 aa15.1■□□□□ 0.01
SAMM50-206ENST00000494795 TRIM52Q96A61 297 aa15.09■□□□□ 0.01
SAMM50-206ENST00000494795 CARMIL2Q6F5E8 1435 aa15.09■□□□□ 0.01
SAMM50-206ENST00000494795 DENND4BO75064 1496 aaPredicted RBP15.09■□□□□ 0.01
SAMM50-206ENST00000494795 ATP10BO94823 1461 aa15.06■□□□□ 0
SAMM50-206ENST00000494795 ABCC5O15440 1437 aa15.06■□□□□ 0
SAMM50-206ENST00000494795 CFDP1Q9UEE9 299 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms