RNA–Protein interactions for RNA: ENST00000494738.5

CAPN10-216, Transcript of calpain 10, humanhuman

TSL 2

Gene CAPN10, Length 4,406 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN10-216ENST00000494738 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
CAPN10-216ENST00000494738 CNGB1Q14028 1251 aaPredicted RBP17.22■□□□□ 0.35
CAPN10-216ENST00000494738 CFDP1Q9UEE9 299 aaPredicted RBP17.18■□□□□ 0.34
CAPN10-216ENST00000494738 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
CAPN10-216ENST00000494738 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
CAPN10-216ENST00000494738 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
CAPN10-216ENST00000494738 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
CAPN10-216ENST00000494738 TRIM26Q12899 539 aaPredicted RBP17.15■□□□□ 0.34
CAPN10-216ENST00000494738 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
CAPN10-216ENST00000494738 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
CAPN10-216ENST00000494738 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
CAPN10-216ENST00000494738 PTPRGP23470 1445 aa17.07■□□□□ 0.32
CAPN10-216ENST00000494738 PLEKHG5O94827 1062 aa17.06■□□□□ 0.32
CAPN10-216ENST00000494738 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
CAPN10-216ENST00000494738 GGT6Q6P531 493 aa17.05■□□□□ 0.32
CAPN10-216ENST00000494738 CLIP1P30622 1438 aa17.04■□□□□ 0.32
CAPN10-216ENST00000494738 ERICH6Q7L0X2 663 aa17.04■□□□□ 0.32
CAPN10-216ENST00000494738 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
CAPN10-216ENST00000494738 EEA1Q15075 1411 aa17.01■□□□□ 0.31
CAPN10-216ENST00000494738 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
CAPN10-216ENST00000494738 CFTRP13569 1480 aa17■□□□□ 0.31
CAPN10-216ENST00000494738 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
CAPN10-216ENST00000494738 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
CAPN10-216ENST00000494738 IFT140Q96RY7 1462 aa16.95■□□□□ 0.3
CAPN10-216ENST00000494738 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
CAPN10-216ENST00000494738 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
CAPN10-216ENST00000494738 GRIN2BQ13224 1484 aa16.91■□□□□ 0.3
CAPN10-216ENST00000494738 CCNB3Q8WWL7 1395 aa16.89■□□□□ 0.29
CAPN10-216ENST00000494738 DIEXFQ68CQ4 756 aaKnown RBP16.89■□□□□ 0.29
CAPN10-216ENST00000494738 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
CAPN10-216ENST00000494738 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
CAPN10-216ENST00000494738 UNC13AQ9UPW8 1703 aa16.85■□□□□ 0.29
CAPN10-216ENST00000494738 HAP1P54257 671 aaPredicted RBP16.84■□□□□ 0.29
CAPN10-216ENST00000494738 PRG4Q92954 1404 aaPredicted RBP16.83■□□□□ 0.29
CAPN10-216ENST00000494738 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
CAPN10-216ENST00000494738 A0A0G2JS52 829 aa16.82■□□□□ 0.28
CAPN10-216ENST00000494738 KDM2AQ9Y2K7 1162 aa16.8■□□□□ 0.28
CAPN10-216ENST00000494738 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
CAPN10-216ENST00000494738 SLC24A1O60721 1099 aa16.79■□□□□ 0.28
CAPN10-216ENST00000494738 RGL3Q3MIN7 710 aa16.79■□□□□ 0.28
CAPN10-216ENST00000494738 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
CAPN10-216ENST00000494738 IGF1RP08069 1367 aa16.79■□□□□ 0.28
CAPN10-216ENST00000494738 POLA1P09884 1462 aaPredicted RBP16.78■□□□□ 0.28
CAPN10-216ENST00000494738 KIF3BO15066 747 aa16.76■□□□□ 0.27
CAPN10-216ENST00000494738 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
CAPN10-216ENST00000494738 DNAJC5Q9H3Z4 198 aa16.76■□□□□ 0.27
CAPN10-216ENST00000494738 FHOD3Q2V2M9 1422 aa16.75■□□□□ 0.27
CAPN10-216ENST00000494738 HNRNPMP52272 730 aaKnown RBP eCLIP16.75■□□□□ 0.27
CAPN10-216ENST00000494738 SPAG9O60271 1321 aaKnown RBP16.74■□□□□ 0.27
CAPN10-216ENST00000494738 ZBTB7CA1YPR0 619 aa16.73■□□□□ 0.27
CAPN10-216ENST00000494738 CEP162Q5TB80 1403 aa16.72■□□□□ 0.27
CAPN10-216ENST00000494738 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
CAPN10-216ENST00000494738 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
CAPN10-216ENST00000494738 WASHC2CQ9Y4E1 1318 aa16.67■□□□□ 0.26
CAPN10-216ENST00000494738 HDGFP51858 240 aaKnown RBP16.67■□□□□ 0.26
CAPN10-216ENST00000494738 FMN1Q68DA7 1419 aa16.67■□□□□ 0.26
CAPN10-216ENST00000494738 KANK1Q14678 1352 aa16.65■□□□□ 0.26
CAPN10-216ENST00000494738 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
CAPN10-216ENST00000494738 NEFLP07196 543 aa16.62■□□□□ 0.25
CAPN10-216ENST00000494738 RUSC2Q8N2Y8 1516 aa16.62■□□□□ 0.25
CAPN10-216ENST00000494738 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
CAPN10-216ENST00000494738 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
CAPN10-216ENST00000494738 RAPGEF3O95398 923 aa16.59■□□□□ 0.25
CAPN10-216ENST00000494738 POGKQ9P215 609 aa16.56■□□□□ 0.24
CAPN10-216ENST00000494738 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
CAPN10-216ENST00000494738 CUX1P39880 1505 aa16.54■□□□□ 0.24
CAPN10-216ENST00000494738 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
CAPN10-216ENST00000494738 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
CAPN10-216ENST00000494738 NUTM2DQ5VT03 806 aaPredicted RBP16.51■□□□□ 0.23
CAPN10-216ENST00000494738 SAFB2Q14151 953 aaKnown RBP eCLIP16.48■□□□□ 0.23
CAPN10-216ENST00000494738 KANK4Q5T7N3 995 aaPredicted RBP16.48■□□□□ 0.23
CAPN10-216ENST00000494738 NEFMP07197 916 aa16.48■□□□□ 0.23
CAPN10-216ENST00000494738 STK26Q9P289 416 aa16.48■□□□□ 0.23
CAPN10-216ENST00000494738 TONSLQ96HA7 1378 aa16.48■□□□□ 0.23
CAPN10-216ENST00000494738 RSPH4AQ5TD94 716 aa16.47■□□□□ 0.23
CAPN10-216ENST00000494738 MAGI1Q96QZ7 1491 aaPredicted RBP16.47■□□□□ 0.23
CAPN10-216ENST00000494738 TMC1Q8TDI8 760 aa16.46■□□□□ 0.23
CAPN10-216ENST00000494738 CCDC18Q5T9S5 1454 aa16.44■□□□□ 0.22
CAPN10-216ENST00000494738 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
CAPN10-216ENST00000494738 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
CAPN10-216ENST00000494738 CCDC9Q9Y3X0 531 aaKnown RBP16.4■□□□□ 0.22
CAPN10-216ENST00000494738 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
CAPN10-216ENST00000494738 UACAQ9BZF9 1416 aa16.4■□□□□ 0.22
CAPN10-216ENST00000494738 KIAA0586Q9BVV6 1533 aa16.39■□□□□ 0.21
CAPN10-216ENST00000494738 ABCA10Q8WWZ4 1543 aa16.39■□□□□ 0.21
CAPN10-216ENST00000494738 NUTM2FA1L443 756 aa16.37■□□□□ 0.21
CAPN10-216ENST00000494738 ANKRD30AQ9BXX3 1397 aa16.37■□□□□ 0.21
CAPN10-216ENST00000494738 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
CAPN10-216ENST00000494738 SOX12O15370 315 aa16.36■□□□□ 0.21
CAPN10-216ENST00000494738 NUP155O75694 1391 aa16.36■□□□□ 0.21
CAPN10-216ENST00000494738 CD109Q6YHK3 1445 aa16.36■□□□□ 0.21
CAPN10-216ENST00000494738 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
CAPN10-216ENST00000494738 PKD2Q13563 968 aa16.35■□□□□ 0.21
CAPN10-216ENST00000494738 ZNF644Q9H582 1327 aaPredicted RBP16.34■□□□□ 0.21
CAPN10-216ENST00000494738 PAK3O75914 559 aaPredicted RBP16.33■□□□□ 0.21
CAPN10-216ENST00000494738 ARHGAP35Q9NRY4 1499 aa16.33■□□□□ 0.2
CAPN10-216ENST00000494738 PIP4K2BP78356 416 aa16.31■□□□□ 0.2
CAPN10-216ENST00000494738 NPM2Q86SE8 214 aaKnown RBP16.31■□□□□ 0.2
CAPN10-216ENST00000494738 FOXD1Q16676 465 aa16.31■□□□□ 0.2
CAPN10-216ENST00000494738 VPS8Q8N3P4 1428 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms