RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
ERCC3-209ENST00000494464 PRG4Q92954 1404 aaPredicted RBP22.58■■□□□ 1.21
ERCC3-209ENST00000494464 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
ERCC3-209ENST00000494464 RAPGEF2Q9Y4G8 1499 aa22.48■■□□□ 1.19
ERCC3-209ENST00000494464 IQGAP2Q13576 1575 aa22.47■■□□□ 1.19
ERCC3-209ENST00000494464 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
ERCC3-209ENST00000494464 CTTNBP2Q8WZ74 1663 aa22.38■■□□□ 1.17
ERCC3-209ENST00000494464 PRXQ9BXM0 1461 aa22.36■■□□□ 1.17
ERCC3-209ENST00000494464 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
ERCC3-209ENST00000494464 UGGT2Q9NYU1 1516 aa22.35■■□□□ 1.17
ERCC3-209ENST00000494464 ADCY10Q96PN6 1610 aa22.35■■□□□ 1.17
ERCC3-209ENST00000494464 DISP1Q96F81 1524 aa22.3■■□□□ 1.16
ERCC3-209ENST00000494464 TNIKQ9UKE5 1360 aa22.29■■□□□ 1.16
ERCC3-209ENST00000494464 MAPKBP1O60336 1514 aa22.28■■□□□ 1.16
ERCC3-209ENST00000494464 KIAA0556O60303 1618 aa22.28■■□□□ 1.16
ERCC3-209ENST00000494464 EEA1Q15075 1411 aa22.28■■□□□ 1.16
ERCC3-209ENST00000494464 PTPRGP23470 1445 aa22.27■■□□□ 1.16
ERCC3-209ENST00000494464 KIF13AQ9H1H9 1805 aa22.25■■□□□ 1.15
ERCC3-209ENST00000494464 UHRF1BP1LA0JNW5 1464 aa22.19■■□□□ 1.14
ERCC3-209ENST00000494464 NPM1P06748 294 aaKnown RBP eCLIP22.18■■□□□ 1.14
ERCC3-209ENST00000494464 CSRNP3Q8WYN3 585 aa22.18■■□□□ 1.14
ERCC3-209ENST00000494464 ABCC2Q92887 1545 aa22.17■■□□□ 1.14
ERCC3-209ENST00000494464 GOLGA3Q08378 1498 aa22.17■■□□□ 1.14
ERCC3-209ENST00000494464 ABCC10Q5T3U5 1492 aa22.16■■□□□ 1.14
ERCC3-209ENST00000494464 DIP2BQ9P265 1576 aa22.16■■□□□ 1.14
ERCC3-209ENST00000494464 UACAQ9BZF9 1416 aa22.14■■□□□ 1.14
ERCC3-209ENST00000494464 KIF21BO75037 1637 aa22.1■■□□□ 1.13
ERCC3-209ENST00000494464 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
ERCC3-209ENST00000494464 KDM5BQ9UGL1 1544 aa22.08■■□□□ 1.13
ERCC3-209ENST00000494464 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.12
ERCC3-209ENST00000494464 SAMD9Q5K651 1589 aa22.05■■□□□ 1.12
ERCC3-209ENST00000494464 ZCCHC11Q5TAX3 1644 aaKnown RBP22.04■■□□□ 1.12
ERCC3-209ENST00000494464 ABCA8O94911 1581 aa22.04■■□□□ 1.12
ERCC3-209ENST00000494464 PLB1Q6P1J6 1458 aa22.03■■□□□ 1.12
ERCC3-209ENST00000494464 ASXL2Q76L83 1435 aa22.02■■□□□ 1.12
ERCC3-209ENST00000494464 FAM69CQ0P6D2 419 aa22.01■■□□□ 1.11
ERCC3-209ENST00000494464 GLI2P10070 1586 aa21.99■■□□□ 1.11
ERCC3-209ENST00000494464 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
ERCC3-209ENST00000494464 TSPOAP1O95153 1857 aa21.92■■□□□ 1.1
ERCC3-209ENST00000494464 EFCAB5A4FU69 1503 aa21.91■■□□□ 1.1
ERCC3-209ENST00000494464 EPRSP07814 1512 aaKnown RBP21.91■■□□□ 1.1
ERCC3-209ENST00000494464 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
ERCC3-209ENST00000494464 MAP3K4Q9Y6R4 1608 aa21.89■■□□□ 1.1
ERCC3-209ENST00000494464 PPRC1Q5VV67 1664 aaKnown RBP21.89■■□□□ 1.09
ERCC3-209ENST00000494464 RAPGEF6Q8TEU7 1601 aa21.87■■□□□ 1.09
ERCC3-209ENST00000494464 KDM6BO15054 1643 aa21.86■■□□□ 1.09
ERCC3-209ENST00000494464 P3H3Q8IVL6 736 aa21.85■■□□□ 1.09
ERCC3-209ENST00000494464 FHOD3Q2V2M9 1422 aa21.82■■□□□ 1.08
ERCC3-209ENST00000494464 CFAP43Q8NDM7 1665 aa21.8■■□□□ 1.08
ERCC3-209ENST00000494464 ATP10BO94823 1461 aa21.79■■□□□ 1.08
ERCC3-209ENST00000494464 NUP153P49790 1475 aaKnown RBP21.77■■□□□ 1.08
ERCC3-209ENST00000494464 TEX14Q8IWB6 1497 aa21.77■■□□□ 1.08
ERCC3-209ENST00000494464 UBTFP17480 764 aaKnown RBP21.74■■□□□ 1.07
ERCC3-209ENST00000494464 RANGAP1P46060 587 aaPredicted RBP21.74■■□□□ 1.07
ERCC3-209ENST00000494464 MAGI3Q5TCQ9 1506 aa21.71■■□□□ 1.07
ERCC3-209ENST00000494464 ARHGAP35Q9NRY4 1499 aa21.71■■□□□ 1.07
ERCC3-209ENST00000494464 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
ERCC3-209ENST00000494464 CD109Q6YHK3 1445 aa21.68■■□□□ 1.06
ERCC3-209ENST00000494464 ARID3CA6NKF2 412 aa21.66■■□□□ 1.06
ERCC3-209ENST00000494464 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
ERCC3-209ENST00000494464 FMN1Q68DA7 1419 aa21.65■■□□□ 1.06
ERCC3-209ENST00000494464 KCNH8Q96L42 1107 aa21.63■■□□□ 1.05
ERCC3-209ENST00000494464 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
ERCC3-209ENST00000494464 COL17A1Q9UMD9 1497 aaPredicted RBP21.63■■□□□ 1.05
ERCC3-209ENST00000494464 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.57■■□□□ 1.04
ERCC3-209ENST00000494464 HNRNPUL2Q1KMD3 747 aaKnown RBP21.57■■□□□ 1.04
ERCC3-209ENST00000494464 CDK13Q14004 1512 aaKnown RBP21.57■■□□□ 1.04
ERCC3-209ENST00000494464 ARAP3Q8WWN8 1544 aa21.53■■□□□ 1.04
ERCC3-209ENST00000494464 NEO1Q92859 1461 aa21.51■■□□□ 1.03
ERCC3-209ENST00000494464 PLEKHD1A6NEE1 506 aa21.51■■□□□ 1.03
ERCC3-209ENST00000494464 LRRIQ1Q96JM4 1722 aa21.51■■□□□ 1.03
ERCC3-209ENST00000494464 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.51■■□□□ 1.03
ERCC3-209ENST00000494464 PHLDB1Q86UU1 1377 aa21.5■■□□□ 1.03
ERCC3-209ENST00000494464 PCF11O94913 1555 aaKnown RBP21.5■■□□□ 1.03
ERCC3-209ENST00000494464 TTC37Q6PGP7 1564 aa21.49■■□□□ 1.03
ERCC3-209ENST00000494464 CFAP74Q9C0B2 1584 aa21.48■■□□□ 1.03
ERCC3-209ENST00000494464 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
ERCC3-209ENST00000494464 CLIP1P30622 1438 aa21.46■■□□□ 1.03
ERCC3-209ENST00000494464 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
ERCC3-209ENST00000494464 CCDC18Q5T9S5 1454 aa21.43■■□□□ 1.02
ERCC3-209ENST00000494464 FYCO1Q9BQS8 1478 aa21.43■■□□□ 1.02
ERCC3-209ENST00000494464 KIF14Q15058 1648 aa21.42■■□□□ 1.02
ERCC3-209ENST00000494464 ATP1B4Q9UN42 357 aaPredicted RBP21.4■■□□□ 1.02
ERCC3-209ENST00000494464 FRMPD1Q5SYB0 1578 aa21.4■■□□□ 1.02
ERCC3-209ENST00000494464 TROQ12816 1431 aaPredicted RBP21.4■■□□□ 1.02
ERCC3-209ENST00000494464 FANCAO15360 1455 aa21.39■■□□□ 1.02
ERCC3-209ENST00000494464 CDK11AQ9UQ88 783 aaPredicted RBP21.39■■□□□ 1.02
ERCC3-209ENST00000494464 MYO5CQ9NQX4 1742 aa21.39■■□□□ 1.01
ERCC3-209ENST00000494464 RICTORQ6R327 1708 aa21.36■■□□□ 1.01
ERCC3-209ENST00000494464 ADGRL1O94910 1474 aa21.36■■□□□ 1.01
ERCC3-209ENST00000494464 KDM4FA0A1W2PPD8 638 aa21.36■■□□□ 1.01
ERCC3-209ENST00000494464 PLCH2O75038 1416 aa21.35■■□□□ 1.01
ERCC3-209ENST00000494464 AKNAQ7Z591 1439 aa21.34■■□□□ 1.01
ERCC3-209ENST00000494464 DENND4BO75064 1496 aaPredicted RBP21.32■■□□□ 1
ERCC3-209ENST00000494464 CEP162Q5TB80 1403 aa21.31■■□□□ 1
ERCC3-209ENST00000494464 ZMYM4Q5VZL5 1548 aa21.3■■□□□ 1
ERCC3-209ENST00000494464 ARHGEF40Q8TER5 1519 aa21.29■■□□□ 1
ERCC3-209ENST00000494464 RAPGEF3O95398 923 aa21.28■■□□□ 1
ERCC3-209ENST00000494464 PREX2Q70Z35 1606 aa21.27■□□□□ 0.99
ERCC3-209ENST00000494464 CDC42BPBQ9Y5S2 1711 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms