RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 RIMBP3Q9UFD9 1639 aa14.6□□□□□ -0.07
GPATCH4-207ENST00000494414 GRIN2AQ12879 1464 aa14.59□□□□□ -0.07
GPATCH4-207ENST00000494414 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
GPATCH4-207ENST00000494414 FHAD1B1AJZ9 1412 aa14.58□□□□□ -0.08
GPATCH4-207ENST00000494414 NUP160Q12769 1436 aa14.58□□□□□ -0.08
GPATCH4-207ENST00000494414 CEP170Q5SW79 1584 aa14.57□□□□□ -0.08
GPATCH4-207ENST00000494414 SHROOM2Q13796 1616 aa14.57□□□□□ -0.08
GPATCH4-207ENST00000494414 ARHGEF11O15085 1522 aa14.56□□□□□ -0.08
GPATCH4-207ENST00000494414 RNF216Q9NWF9 866 aaPredicted RBP14.55□□□□□ -0.08
GPATCH4-207ENST00000494414 RUSC2Q8N2Y8 1516 aa14.53□□□□□ -0.08
GPATCH4-207ENST00000494414 KIF27Q86VH2 1401 aa14.53□□□□□ -0.08
GPATCH4-207ENST00000494414 IGF1RP08069 1367 aa14.47□□□□□ -0.09
GPATCH4-207ENST00000494414 ARAP1Q96P48 1450 aa14.46□□□□□ -0.09
GPATCH4-207ENST00000494414 HOXD11P31277 338 aaPredicted RBP14.46□□□□□ -0.09
GPATCH4-207ENST00000494414 POTEDQ86YR6 584 aa14.46□□□□□ -0.09
GPATCH4-207ENST00000494414 CHMP7Q8WUX9 453 aaPredicted RBP14.42□□□□□ -0.1
GPATCH4-207ENST00000494414 ERCC6L2Q5T890 1561 aa14.4□□□□□ -0.1
GPATCH4-207ENST00000494414 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
GPATCH4-207ENST00000494414 KIAA0586Q9BVV6 1533 aa14.36□□□□□ -0.11
GPATCH4-207ENST00000494414 FBLN2P98095 1184 aa14.36□□□□□ -0.11
GPATCH4-207ENST00000494414 PRXQ9BXM0 1461 aa14.36□□□□□ -0.11
GPATCH4-207ENST00000494414 CARMIL1Q5VZK9 1371 aa14.34□□□□□ -0.11
GPATCH4-207ENST00000494414 RAPGEF2Q9Y4G8 1499 aa14.32□□□□□ -0.12
GPATCH4-207ENST00000494414 IQGAP2Q13576 1575 aa14.32□□□□□ -0.12
GPATCH4-207ENST00000494414 EEA1Q15075 1411 aa14.31□□□□□ -0.12
GPATCH4-207ENST00000494414 DCAF8L1A6NGE4 600 aa14.3□□□□□ -0.12
GPATCH4-207ENST00000494414 UGGT2Q9NYU1 1516 aa14.29□□□□□ -0.12
GPATCH4-207ENST00000494414 TRIM41Q8WV44 630 aa14.27□□□□□ -0.13
GPATCH4-207ENST00000494414 KIF21BO75037 1637 aa14.26□□□□□ -0.13
GPATCH4-207ENST00000494414 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
GPATCH4-207ENST00000494414 PRG4Q92954 1404 aaPredicted RBP14.24□□□□□ -0.13
GPATCH4-207ENST00000494414 DISP1Q96F81 1524 aa14.23□□□□□ -0.13
GPATCH4-207ENST00000494414 KIAA0556O60303 1618 aa14.23□□□□□ -0.13
GPATCH4-207ENST00000494414 ADCY10Q96PN6 1610 aa14.2□□□□□ -0.14
GPATCH4-207ENST00000494414 JPH4Q96JJ6 628 aa14.19□□□□□ -0.14
GPATCH4-207ENST00000494414 SAMD9Q5K651 1589 aa14.18□□□□□ -0.14
GPATCH4-207ENST00000494414 CYB5RLQ6IPT4 315 aa14.14□□□□□ -0.15
GPATCH4-207ENST00000494414 MAPKBP1O60336 1514 aa14.14□□□□□ -0.15
GPATCH4-207ENST00000494414 UHRF1BP1LA0JNW5 1464 aa14.12□□□□□ -0.15
GPATCH4-207ENST00000494414 KIF13AQ9H1H9 1805 aa14.12□□□□□ -0.15
GPATCH4-207ENST00000494414 CARMIL2Q6F5E8 1435 aa14.11□□□□□ -0.15
GPATCH4-207ENST00000494414 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
GPATCH4-207ENST00000494414 TNIKQ9UKE5 1360 aa14.09□□□□□ -0.15
GPATCH4-207ENST00000494414 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
GPATCH4-207ENST00000494414 ABCC2Q92887 1545 aa14.09□□□□□ -0.15
GPATCH4-207ENST00000494414 ABCA8O94911 1581 aa14.08□□□□□ -0.16
GPATCH4-207ENST00000494414 EFCAB5A4FU69 1503 aa14.05□□□□□ -0.16
GPATCH4-207ENST00000494414 DIP2BQ9P265 1576 aa14.05□□□□□ -0.16
GPATCH4-207ENST00000494414 KDM5BQ9UGL1 1544 aa14.04□□□□□ -0.16
GPATCH4-207ENST00000494414 PTPRGP23470 1445 aa14.03□□□□□ -0.16
GPATCH4-207ENST00000494414 ZCCHC11Q5TAX3 1644 aaKnown RBP14.03□□□□□ -0.16
GPATCH4-207ENST00000494414 UACAQ9BZF9 1416 aa14.01□□□□□ -0.17
GPATCH4-207ENST00000494414 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
GPATCH4-207ENST00000494414 GLI2P10070 1586 aa13.97□□□□□ -0.17
GPATCH4-207ENST00000494414 PLB1Q6P1J6 1458 aa13.97□□□□□ -0.17
GPATCH4-207ENST00000494414 RAPGEF6Q8TEU7 1601 aa13.97□□□□□ -0.17
GPATCH4-207ENST00000494414 PPRC1Q5VV67 1664 aaKnown RBP13.95□□□□□ -0.18
GPATCH4-207ENST00000494414 MAP3K4Q9Y6R4 1608 aa13.93□□□□□ -0.18
GPATCH4-207ENST00000494414 ARHGAP35Q9NRY4 1499 aa13.92□□□□□ -0.18
GPATCH4-207ENST00000494414 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.9□□□□□ -0.187e-7■■□□□ 12.5
GPATCH4-207ENST00000494414 NUP153P49790 1475 aaKnown RBP13.89□□□□□ -0.19
GPATCH4-207ENST00000494414 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
GPATCH4-207ENST00000494414 ASXL2Q76L83 1435 aa13.89□□□□□ -0.19
GPATCH4-207ENST00000494414 LRRIQ1Q96JM4 1722 aa13.88□□□□□ -0.19
GPATCH4-207ENST00000494414 FHOD3Q2V2M9 1422 aa13.88□□□□□ -0.19
GPATCH4-207ENST00000494414 EPRSP07814 1512 aaKnown RBP13.87□□□□□ -0.19
GPATCH4-207ENST00000494414 FAM9AQ8IZU1 332 aaPredicted RBP13.87□□□□□ -0.19
GPATCH4-207ENST00000494414 CFAP43Q8NDM7 1665 aa13.87□□□□□ -0.19
GPATCH4-207ENST00000494414 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
GPATCH4-207ENST00000494414 ATP10BO94823 1461 aa13.85□□□□□ -0.19
GPATCH4-207ENST00000494414 HECW1Q76N89 1606 aa13.83□□□□□ -0.2
GPATCH4-207ENST00000494414 ABCA9Q8IUA7 1624 aa13.83□□□□□ -0.2
GPATCH4-207ENST00000494414 PCF11O94913 1555 aaKnown RBP13.8□□□□□ -0.2
GPATCH4-207ENST00000494414 SLC4A2P04920 1241 aa13.8□□□□□ -0.2
GPATCH4-207ENST00000494414 TSPOAP1O95153 1857 aa13.8□□□□□ -0.2
GPATCH4-207ENST00000494414 FMN1Q68DA7 1419 aa13.8□□□□□ -0.2
GPATCH4-207ENST00000494414 NPM1P06748 294 aaKnown RBP eCLIP13.78□□□□□ -0.2
GPATCH4-207ENST00000494414 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
GPATCH4-207ENST00000494414 MAGI3Q5TCQ9 1506 aa13.77□□□□□ -0.21
GPATCH4-207ENST00000494414 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
GPATCH4-207ENST00000494414 CDK13Q14004 1512 aaKnown RBP13.74□□□□□ -0.21
GPATCH4-207ENST00000494414 KDM6BO15054 1643 aa13.74□□□□□ -0.21
GPATCH4-207ENST00000494414 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
GPATCH4-207ENST00000494414 CASKIN1Q8WXD9 1431 aa13.73□□□□□ -0.21
GPATCH4-207ENST00000494414 CLIP1P30622 1438 aa13.73□□□□□ -0.21
GPATCH4-207ENST00000494414 UBTFP17480 764 aaKnown RBP13.72□□□□□ -0.21
GPATCH4-207ENST00000494414 FAM69CQ0P6D2 419 aa13.72□□□□□ -0.21
GPATCH4-207ENST00000494414 P3H3Q8IVL6 736 aa13.72□□□□□ -0.21
GPATCH4-207ENST00000494414 TTC37Q6PGP7 1564 aa13.71□□□□□ -0.21
GPATCH4-207ENST00000494414 TTBK1Q5TCY1 1321 aaPredicted RBP13.71□□□□□ -0.21
GPATCH4-207ENST00000494414 TEX14Q8IWB6 1497 aa13.71□□□□□ -0.21
GPATCH4-207ENST00000494414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.22
GPATCH4-207ENST00000494414 CCDC18Q5T9S5 1454 aa13.69□□□□□ -0.22
GPATCH4-207ENST00000494414 ZBTB22O15209 634 aa13.69□□□□□ -0.22
GPATCH4-207ENST00000494414 CEP162Q5TB80 1403 aa13.69□□□□□ -0.22
GPATCH4-207ENST00000494414 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
GPATCH4-207ENST00000494414 KIF14Q15058 1648 aa13.68□□□□□ -0.22
GPATCH4-207ENST00000494414 CFAP74Q9C0B2 1584 aa13.66□□□□□ -0.22
GPATCH4-207ENST00000494414 MYO5CQ9NQX4 1742 aa13.66□□□□□ -0.22
GPATCH4-207ENST00000494414 COL17A1Q9UMD9 1497 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms