RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 ZNF316A6NFI3 1004 aaPredicted RBP18.44■□□□□ 0.54
PHF3-205ENST00000494284 WDR97A6NE52 1622 aa18.42■□□□□ 0.54
PHF3-205ENST00000494284 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
PHF3-205ENST00000494284 FAM50AQ14320 339 aaKnown RBP18.4■□□□□ 0.54
PHF3-205ENST00000494284 ARID3CA6NKF2 412 aa18.4■□□□□ 0.54
PHF3-205ENST00000494284 PHLDB1Q86UU1 1377 aa18.38■□□□□ 0.53
PHF3-205ENST00000494284 CCNB3Q8WWL7 1395 aa18.38■□□□□ 0.53
PHF3-205ENST00000494284 PCF11O94913 1555 aaKnown RBP18.37■□□□□ 0.53
PHF3-205ENST00000494284 DHX57Q6P158 1386 aaKnown RBP18.37■□□□□ 0.53
PHF3-205ENST00000494284 GTF3C3Q9Y5Q9 886 aa18.37■□□□□ 0.53
PHF3-205ENST00000494284 CUL7Q14999 1698 aa18.35■□□□□ 0.53
PHF3-205ENST00000494284 TIAM1Q13009 1591 aa18.35■□□□□ 0.53
PHF3-205ENST00000494284 RRBP1Q9P2E9 1410 aaKnown RBP18.35■□□□□ 0.53
PHF3-205ENST00000494284 MIER1Q8N108 512 aa18.34■□□□□ 0.53
PHF3-205ENST00000494284 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
PHF3-205ENST00000494284 AQRO60306 1485 aaKnown RBP eCLIP18.34■□□□□ 0.53
PHF3-205ENST00000494284 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.53
PHF3-205ENST00000494284 LRRC9Q6ZRR7 1453 aa18.31■□□□□ 0.52
PHF3-205ENST00000494284 TARBP1Q13395 1621 aaKnown RBP18.31■□□□□ 0.52
PHF3-205ENST00000494284 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
PHF3-205ENST00000494284 CENPBP07199 599 aaPredicted RBP18.28■□□□□ 0.52
PHF3-205ENST00000494284 RAB3GAP2Q9H2M9 1393 aa18.25■□□□□ 0.51
PHF3-205ENST00000494284 CTTNBP2Q8WZ74 1663 aa18.25■□□□□ 0.51
PHF3-205ENST00000494284 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
PHF3-205ENST00000494284 FHAD1B1AJZ9 1412 aa18.22■□□□□ 0.51
PHF3-205ENST00000494284 SIN3AQ96ST3 1273 aa18.2■□□□□ 0.5
PHF3-205ENST00000494284 PBRM1Q86U86 1689 aa18.18■□□□□ 0.5
PHF3-205ENST00000494284 WDR62O43379 1518 aa18.18■□□□□ 0.5
PHF3-205ENST00000494284 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
PHF3-205ENST00000494284 LRRIQ1Q96JM4 1722 aa18.16■□□□□ 0.5
PHF3-205ENST00000494284 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
PHF3-205ENST00000494284 CFAP43Q8NDM7 1665 aa18.15■□□□□ 0.5
PHF3-205ENST00000494284 EFCAB5A4FU69 1503 aa18.15■□□□□ 0.5
PHF3-205ENST00000494284 SNAPC4Q5SXM2 1469 aa18.15■□□□□ 0.5
PHF3-205ENST00000494284 MTUS2Q5JR59 1369 aa18.13■□□□□ 0.49
PHF3-205ENST00000494284 FYCO1Q9BQS8 1478 aa18.13■□□□□ 0.49
PHF3-205ENST00000494284 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
PHF3-205ENST00000494284 FBLN2P98095 1184 aa18.12■□□□□ 0.49
PHF3-205ENST00000494284 HIRIP3Q9BW71 556 aaPredicted RBP18.1■□□□□ 0.49
PHF3-205ENST00000494284 MAP3K1Q13233 1512 aa18.1■□□□□ 0.49
PHF3-205ENST00000494284 MAPKBP1O60336 1514 aa18.09■□□□□ 0.49
PHF3-205ENST00000494284 SETD5Q9C0A6 1442 aa18.09■□□□□ 0.49
PHF3-205ENST00000494284 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
PHF3-205ENST00000494284 GRIN2BQ13224 1484 aa18.09■□□□□ 0.49
PHF3-205ENST00000494284 FMN1Q68DA7 1419 aa18.09■□□□□ 0.49
PHF3-205ENST00000494284 ADAMTS12P58397 1594 aa18.08■□□□□ 0.48
PHF3-205ENST00000494284 PTPRKQ15262 1439 aa18.07■□□□□ 0.48
PHF3-205ENST00000494284 SAMD9Q5K651 1589 aa18.07■□□□□ 0.48
PHF3-205ENST00000494284 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
PHF3-205ENST00000494284 MAGI3Q5TCQ9 1506 aa18.06■□□□□ 0.48
PHF3-205ENST00000494284 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
PHF3-205ENST00000494284 FGD6Q6ZV73 1430 aa18.03■□□□□ 0.48
PHF3-205ENST00000494284 RRP7BPQ9NSQ0 103 aa18.02■□□□□ 0.48
PHF3-205ENST00000494284 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
PHF3-205ENST00000494284 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
PHF3-205ENST00000494284 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
PHF3-205ENST00000494284 IQGAP2Q13576 1575 aa17.98■□□□□ 0.47
PHF3-205ENST00000494284 KCNH8Q96L42 1107 aa17.93■□□□□ 0.46
PHF3-205ENST00000494284 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
PHF3-205ENST00000494284 ZNF644Q9H582 1327 aaPredicted RBP17.92■□□□□ 0.46
PHF3-205ENST00000494284 MYOM3Q5VTT5 1437 aa17.91■□□□□ 0.46
PHF3-205ENST00000494284 FOXD1Q16676 465 aa17.9■□□□□ 0.46
PHF3-205ENST00000494284 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
PHF3-205ENST00000494284 GRIN2AQ12879 1464 aa17.89■□□□□ 0.45
PHF3-205ENST00000494284 CCDC18Q5T9S5 1454 aa17.88■□□□□ 0.45
PHF3-205ENST00000494284 MAGI1Q96QZ7 1491 aaPredicted RBP17.87■□□□□ 0.45
PHF3-205ENST00000494284 DISP1Q96F81 1524 aa17.86■□□□□ 0.45
PHF3-205ENST00000494284 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
PHF3-205ENST00000494284 KIAA0586Q9BVV6 1533 aa17.86■□□□□ 0.45
PHF3-205ENST00000494284 UGGT2Q9NYU1 1516 aa17.86■□□□□ 0.45
PHF3-205ENST00000494284 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
PHF3-205ENST00000494284 TRIM52Q96A61 297 aa17.85■□□□□ 0.45
PHF3-205ENST00000494284 NAIPQ13075 1403 aa17.84■□□□□ 0.45
PHF3-205ENST00000494284 PTPN23Q9H3S7 1636 aa17.84■□□□□ 0.45
PHF3-205ENST00000494284 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.45
PHF3-205ENST00000494284 KDM6BO15054 1643 aa17.83■□□□□ 0.45
PHF3-205ENST00000494284 SYNJ2O15056 1496 aa17.83■□□□□ 0.44
PHF3-205ENST00000494284 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
PHF3-205ENST00000494284 PLB1Q6P1J6 1458 aa17.82■□□□□ 0.44
PHF3-205ENST00000494284 HECW1Q76N89 1606 aa17.81■□□□□ 0.44
PHF3-205ENST00000494284 ZNF777Q9ULD5 760 aaPredicted RBP17.81■□□□□ 0.44
PHF3-205ENST00000494284 HFM1A2PYH4 1435 aa17.8■□□□□ 0.44
PHF3-205ENST00000494284 CEP170Q5SW79 1584 aa17.8■□□□□ 0.44
PHF3-205ENST00000494284 KIAA0556O60303 1618 aa17.79■□□□□ 0.44
PHF3-205ENST00000494284 NUP153P49790 1475 aaKnown RBP17.79■□□□□ 0.44
PHF3-205ENST00000494284 PRG4Q92954 1404 aaPredicted RBP17.79■□□□□ 0.44
PHF3-205ENST00000494284 PPP1R15AO75807 674 aaPredicted RBP17.77■□□□□ 0.44
PHF3-205ENST00000494284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.77■□□□□ 0.44
PHF3-205ENST00000494284 ARHGEF11O15085 1522 aa17.77■□□□□ 0.43
PHF3-205ENST00000494284 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
PHF3-205ENST00000494284 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
PHF3-205ENST00000494284 UACAQ9BZF9 1416 aa17.73■□□□□ 0.43
PHF3-205ENST00000494284 DENND4BO75064 1496 aaPredicted RBP17.72■□□□□ 0.43
PHF3-205ENST00000494284 NUP160Q12769 1436 aa17.71■□□□□ 0.43
PHF3-205ENST00000494284 RAPGEF6Q8TEU7 1601 aa17.69■□□□□ 0.42
PHF3-205ENST00000494284 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
PHF3-205ENST00000494284 KIF14Q15058 1648 aa17.66■□□□□ 0.42
PHF3-205ENST00000494284 BCANQ96GW7 911 aa17.65■□□□□ 0.42
PHF3-205ENST00000494284 CFDP1Q9UEE9 299 aaPredicted RBP17.65■□□□□ 0.42
PHF3-205ENST00000494284 TCOF1Q13428 1488 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms