RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 RIMBP3Q9UFD9 1639 aa20.72■□□□□ 0.91
TRA2A-209ENST00000494255 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
TRA2A-209ENST00000494255 KIAA0586Q9BVV6 1533 aa20.68■□□□□ 0.9
TRA2A-209ENST00000494255 SHROOM2Q13796 1616 aa20.65■□□□□ 0.9
TRA2A-209ENST00000494255 JPH4Q96JJ6 628 aa20.64■□□□□ 0.89
TRA2A-209ENST00000494255 IQGAP2Q13576 1575 aa20.61■□□□□ 0.89
TRA2A-209ENST00000494255 CTTNBP2Q8WZ74 1663 aa20.59■□□□□ 0.89
TRA2A-209ENST00000494255 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.89
TRA2A-209ENST00000494255 KIF21BO75037 1637 aa20.58■□□□□ 0.89
TRA2A-209ENST00000494255 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
TRA2A-209ENST00000494255 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
TRA2A-209ENST00000494255 CYB5RLQ6IPT4 315 aa20.54■□□□□ 0.88
TRA2A-209ENST00000494255 CARMIL2Q6F5E8 1435 aa20.49■□□□□ 0.87
TRA2A-209ENST00000494255 GOLGA3Q08378 1498 aa20.48■□□□□ 0.87
TRA2A-209ENST00000494255 UGGT2Q9NYU1 1516 aa20.48■□□□□ 0.87
TRA2A-209ENST00000494255 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
TRA2A-209ENST00000494255 UBTFP17480 764 aaKnown RBP20.44■□□□□ 0.86
TRA2A-209ENST00000494255 DISP1Q96F81 1524 aa20.42■□□□□ 0.86
TRA2A-209ENST00000494255 KIAA0556O60303 1618 aa20.4■□□□□ 0.86
TRA2A-209ENST00000494255 TNIKQ9UKE5 1360 aa20.39■□□□□ 0.85
TRA2A-209ENST00000494255 PTPRGP23470 1445 aa20.36■□□□□ 0.85
TRA2A-209ENST00000494255 TTBK1Q5TCY1 1321 aaPredicted RBP20.36■□□□□ 0.85
TRA2A-209ENST00000494255 RANGAP1P46060 587 aaPredicted RBP20.33■□□□□ 0.85
TRA2A-209ENST00000494255 SAMD9Q5K651 1589 aa20.3■□□□□ 0.84
TRA2A-209ENST00000494255 P3H3Q8IVL6 736 aa20.28■□□□□ 0.84
TRA2A-209ENST00000494255 EFCAB5A4FU69 1503 aa20.26■□□□□ 0.83
TRA2A-209ENST00000494255 ADCY10Q96PN6 1610 aa20.25■□□□□ 0.83
TRA2A-209ENST00000494255 UACAQ9BZF9 1416 aa20.23■□□□□ 0.83
TRA2A-209ENST00000494255 NPM1P06748 294 aaKnown RBP eCLIP20.22■□□□□ 0.83
TRA2A-209ENST00000494255 UHRF1BP1LA0JNW5 1464 aa20.2■□□□□ 0.82
TRA2A-209ENST00000494255 FHOD3Q2V2M9 1422 aa20.19■□□□□ 0.82
TRA2A-209ENST00000494255 ABCC2Q92887 1545 aa20.19■□□□□ 0.82
TRA2A-209ENST00000494255 PLB1Q6P1J6 1458 aa20.17■□□□□ 0.82
TRA2A-209ENST00000494255 ARHGAP35Q9NRY4 1499 aa20.16■□□□□ 0.82
TRA2A-209ENST00000494255 ABCA8O94911 1581 aa20.15■□□□□ 0.82
TRA2A-209ENST00000494255 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
TRA2A-209ENST00000494255 CLIP1P30622 1438 aa20.12■□□□□ 0.81
TRA2A-209ENST00000494255 RAPGEF6Q8TEU7 1601 aa20.1■□□□□ 0.81
TRA2A-209ENST00000494255 TRHP20396 242 aaPredicted RBP20.1■□□□□ 0.81
TRA2A-209ENST00000494255 KDM5BQ9UGL1 1544 aa20.09■□□□□ 0.81
TRA2A-209ENST00000494255 MAPKBP1O60336 1514 aa20.09■□□□□ 0.81
TRA2A-209ENST00000494255 FMN1Q68DA7 1419 aa20.08■□□□□ 0.8
TRA2A-209ENST00000494255 ZCCHC11Q5TAX3 1644 aaKnown RBP20.07■□□□□ 0.8
TRA2A-209ENST00000494255 CEP162Q5TB80 1403 aa20.06■□□□□ 0.8
TRA2A-209ENST00000494255 ASXL2Q76L83 1435 aa20.02■□□□□ 0.79
TRA2A-209ENST00000494255 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
TRA2A-209ENST00000494255 NUP153P49790 1475 aaKnown RBP20■□□□□ 0.79
TRA2A-209ENST00000494255 ATP10BO94823 1461 aa19.98■□□□□ 0.79
TRA2A-209ENST00000494255 HECW1Q76N89 1606 aa19.98■□□□□ 0.79
TRA2A-209ENST00000494255 ATP1B4Q9UN42 357 aaPredicted RBP19.97■□□□□ 0.79
TRA2A-209ENST00000494255 ABCC10Q5T3U5 1492 aa19.97■□□□□ 0.79
TRA2A-209ENST00000494255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.97■□□□□ 0.79
TRA2A-209ENST00000494255 HNRNPUL2Q1KMD3 747 aaKnown RBP19.97■□□□□ 0.79
TRA2A-209ENST00000494255 KIF13AQ9H1H9 1805 aa19.95■□□□□ 0.78
TRA2A-209ENST00000494255 DIP2BQ9P265 1576 aa19.95■□□□□ 0.78
TRA2A-209ENST00000494255 WDR7Q9Y4E6 1490 aa19.94■□□□□ 0.78
TRA2A-209ENST00000494255 FAM69CQ0P6D2 419 aa19.94■□□□□ 0.78
TRA2A-209ENST00000494255 PCF11O94913 1555 aaKnown RBP19.92■□□□□ 0.78
TRA2A-209ENST00000494255 CASKIN1Q8WXD9 1431 aa19.92■□□□□ 0.78
TRA2A-209ENST00000494255 FYCO1Q9BQS8 1478 aa19.9■□□□□ 0.78
TRA2A-209ENST00000494255 EPRSP07814 1512 aaKnown RBP19.89■□□□□ 0.77
TRA2A-209ENST00000494255 CDK13Q14004 1512 aaKnown RBP19.89■□□□□ 0.77
TRA2A-209ENST00000494255 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
TRA2A-209ENST00000494255 PLEKHD1A6NEE1 506 aa19.87■□□□□ 0.77
TRA2A-209ENST00000494255 GLI2P10070 1586 aa19.87■□□□□ 0.77
TRA2A-209ENST00000494255 CCDC18Q5T9S5 1454 aa19.85■□□□□ 0.77
TRA2A-209ENST00000494255 CDK11AQ9UQ88 783 aaPredicted RBP19.84■□□□□ 0.77
TRA2A-209ENST00000494255 LRRIQ1Q96JM4 1722 aa19.83■□□□□ 0.77
TRA2A-209ENST00000494255 VPS8Q8N3P4 1428 aa19.81■□□□□ 0.76
TRA2A-209ENST00000494255 TSPOAP1O95153 1857 aa19.8■□□□□ 0.76
TRA2A-209ENST00000494255 MAP3K4Q9Y6R4 1608 aa19.79■□□□□ 0.76
TRA2A-209ENST00000494255 CFAP43Q8NDM7 1665 aa19.78■□□□□ 0.76
TRA2A-209ENST00000494255 ABCA9Q8IUA7 1624 aa19.74■□□□□ 0.75
TRA2A-209ENST00000494255 CD109Q6YHK3 1445 aa19.74■□□□□ 0.75
TRA2A-209ENST00000494255 TROQ12816 1431 aaPredicted RBP19.74■□□□□ 0.75
TRA2A-209ENST00000494255 TEX14Q8IWB6 1497 aa19.71■□□□□ 0.75
TRA2A-209ENST00000494255 PPRC1Q5VV67 1664 aaKnown RBP19.71■□□□□ 0.75
TRA2A-209ENST00000494255 KIF14Q15058 1648 aa19.7■□□□□ 0.74
TRA2A-209ENST00000494255 MAGI3Q5TCQ9 1506 aa19.69■□□□□ 0.74
TRA2A-209ENST00000494255 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.749e-16■■■■□ 20.9
TRA2A-209ENST00000494255 MTUS2Q5JR59 1369 aa19.67■□□□□ 0.74
TRA2A-209ENST00000494255 TTC37Q6PGP7 1564 aa19.66■□□□□ 0.74
TRA2A-209ENST00000494255 TIAM1Q13009 1591 aa19.65■□□□□ 0.74
TRA2A-209ENST00000494255 APLP2Q06481 763 aa19.64■□□□□ 0.73
TRA2A-209ENST00000494255 EHBP1L1Q8N3D4 1523 aa19.63■□□□□ 0.73
TRA2A-209ENST00000494255 KDM6BO15054 1643 aa19.61■□□□□ 0.73
TRA2A-209ENST00000494255 MAP3K1Q13233 1512 aa19.61■□□□□ 0.73
TRA2A-209ENST00000494255 MYO5CQ9NQX4 1742 aa19.61■□□□□ 0.73
TRA2A-209ENST00000494255 PLCH2O75038 1416 aa19.58■□□□□ 0.73
TRA2A-209ENST00000494255 CFAP74Q9C0B2 1584 aa19.58■□□□□ 0.72
TRA2A-209ENST00000494255 NEO1Q92859 1461 aa19.57■□□□□ 0.72
TRA2A-209ENST00000494255 PHLDB1Q86UU1 1377 aa19.57■□□□□ 0.72
TRA2A-209ENST00000494255 ARAP3Q8WWN8 1544 aa19.56■□□□□ 0.72
TRA2A-209ENST00000494255 FANCAO15360 1455 aa19.56■□□□□ 0.72
TRA2A-209ENST00000494255 LRRC9Q6ZRR7 1453 aa19.56■□□□□ 0.72
TRA2A-209ENST00000494255 SUPT6HQ7KZ85 1726 aaKnown RBP19.54■□□□□ 0.72
TRA2A-209ENST00000494255 EFCAB2Q5VUJ9 269 aa19.53■□□□□ 0.72
TRA2A-209ENST00000494255 ARHGAP5Q13017 1502 aa19.53■□□□□ 0.72
TRA2A-209ENST00000494255 PREX2Q70Z35 1606 aa19.52■□□□□ 0.72
TRA2A-209ENST00000494255 CCNB3Q8WWL7 1395 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms