RNA–Protein interactions for RNA: ENST00000494060.1

DEPDC5-219, Transcript of DEP domain containing 5, humanhuman

TSL 5

Gene DEPDC5, Length 750 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-219ENST00000494060 PEG3Q9GZU2 1588 aa17.9■□□□□ 0.46
DEPDC5-219ENST00000494060 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
DEPDC5-219ENST00000494060 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
DEPDC5-219ENST00000494060 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
DEPDC5-219ENST00000494060 ERCC6Q03468 1493 aa17.8■□□□□ 0.44
DEPDC5-219ENST00000494060 NESP48681 1621 aa17.76■□□□□ 0.43
DEPDC5-219ENST00000494060 CLCN6P51797 869 aa17.73■□□□□ 0.43
DEPDC5-219ENST00000494060 DCBLD2Q96PD2 775 aa17.73■□□□□ 0.43
DEPDC5-219ENST00000494060 ZNF579Q8NAF0 562 aaKnown RBP17.72■□□□□ 0.43
DEPDC5-219ENST00000494060 WIZO95785 1651 aa17.71■□□□□ 0.42
DEPDC5-219ENST00000494060 CREBZFQ9NS37 354 aa17.7■□□□□ 0.42
DEPDC5-219ENST00000494060 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
DEPDC5-219ENST00000494060 CUX2O14529 1486 aa17.69■□□□□ 0.42
DEPDC5-219ENST00000494060 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
DEPDC5-219ENST00000494060 GALR2O43603 387 aaPredicted RBP17.63■□□□□ 0.41
DEPDC5-219ENST00000494060 PLSCR2Q9NRY7 297 aa17.61■□□□□ 0.41
DEPDC5-219ENST00000494060 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
DEPDC5-219ENST00000494060 POTEB2H3BUK9 544 aa17.55■□□□□ 0.4
DEPDC5-219ENST00000494060 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
DEPDC5-219ENST00000494060 OTUD5Q96G74 571 aa17.54■□□□□ 0.4
DEPDC5-219ENST00000494060 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
DEPDC5-219ENST00000494060 PHF12Q96QT6 1004 aa17.47■□□□□ 0.39
DEPDC5-219ENST00000494060 STAG3Q9UJ98 1225 aa17.44■□□□□ 0.38
DEPDC5-219ENST00000494060 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
DEPDC5-219ENST00000494060 PELP1Q8IZL8 1130 aaKnown RBP17.41■□□□□ 0.38
DEPDC5-219ENST00000494060 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
DEPDC5-219ENST00000494060 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
DEPDC5-219ENST00000494060 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
DEPDC5-219ENST00000494060 MNX1P50219 401 aaPredicted RBP17.35■□□□□ 0.37
DEPDC5-219ENST00000494060 SPDYE4A6NLX3 237 aa17.33■□□□□ 0.36
DEPDC5-219ENST00000494060 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
DEPDC5-219ENST00000494060 CFTRP13569 1480 aa17.31■□□□□ 0.36
DEPDC5-219ENST00000494060 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
DEPDC5-219ENST00000494060 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
DEPDC5-219ENST00000494060 PRDM2Q13029 1718 aa17.27■□□□□ 0.36
DEPDC5-219ENST00000494060 POTEMA6NI47 508 aa17.25■□□□□ 0.35
DEPDC5-219ENST00000494060 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
DEPDC5-219ENST00000494060 POTEJP0CG39 1038 aa17.22■□□□□ 0.35
DEPDC5-219ENST00000494060 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
DEPDC5-219ENST00000494060 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
DEPDC5-219ENST00000494060 SUPT5HO00267 1087 aaKnown RBP17.2■□□□□ 0.34
DEPDC5-219ENST00000494060 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
DEPDC5-219ENST00000494060 POTEGQ6S5H5 508 aa17.19■□□□□ 0.34
DEPDC5-219ENST00000494060 MS4A3Q96HJ5 214 aa17.19■□□□□ 0.34
DEPDC5-219ENST00000494060 ASTLQ6HA08 431 aaPredicted RBP17.17■□□□□ 0.34
DEPDC5-219ENST00000494060 METRNQ9UJH8 293 aa17.15■□□□□ 0.34
DEPDC5-219ENST00000494060 ATMINO43313 823 aaPredicted RBP17.14■□□□□ 0.33
DEPDC5-219ENST00000494060 WDR62O43379 1518 aa17.14■□□□□ 0.33
DEPDC5-219ENST00000494060 SLC39A7Q92504 469 aa17.04■□□□□ 0.32
DEPDC5-219ENST00000494060 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
DEPDC5-219ENST00000494060 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
DEPDC5-219ENST00000494060 C7P10643 843 aa17.03■□□□□ 0.32
DEPDC5-219ENST00000494060 LCE2DQ5TA82 110 aaPredicted RBP17.02■□□□□ 0.32
DEPDC5-219ENST00000494060 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
DEPDC5-219ENST00000494060 TSPYL2Q9H2G4 693 aaPredicted RBP16.98■□□□□ 0.31
DEPDC5-219ENST00000494060 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
DEPDC5-219ENST00000494060 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
DEPDC5-219ENST00000494060 CCDC61Q9Y6R9 512 aa16.95■□□□□ 0.3
DEPDC5-219ENST00000494060 TOPBP1Q92547 1522 aa16.94■□□□□ 0.3
DEPDC5-219ENST00000494060 POTEFA5A3E0 1075 aa16.93■□□□□ 0.3
DEPDC5-219ENST00000494060 TRPC6Q9Y210 931 aa16.92■□□□□ 0.3
DEPDC5-219ENST00000494060 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
DEPDC5-219ENST00000494060 KIF12Q96FN5 646 aa16.89■□□□□ 0.29
DEPDC5-219ENST00000494060 MAMSTRQ6ZN01 415 aa16.88■□□□□ 0.29
DEPDC5-219ENST00000494060 IFT140Q96RY7 1462 aa16.87■□□□□ 0.29
DEPDC5-219ENST00000494060 PROM2Q8N271 834 aa16.87■□□□□ 0.29
DEPDC5-219ENST00000494060 FAM163AQ96GL9 167 aaPredicted RBP16.87■□□□□ 0.29
DEPDC5-219ENST00000494060 PCDH10Q9P2E7 1040 aa16.87■□□□□ 0.29
DEPDC5-219ENST00000494060 BMP2KQ9NSY1 1161 aaPredicted RBP16.84■□□□□ 0.29
DEPDC5-219ENST00000494060 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
DEPDC5-219ENST00000494060 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.28
DEPDC5-219ENST00000494060 POLA1P09884 1462 aaPredicted RBP16.79■□□□□ 0.28
DEPDC5-219ENST00000494060 SCUBE2Q9NQ36 999 aa16.78■□□□□ 0.28
DEPDC5-219ENST00000494060 CUX1P39880 1505 aa16.78■□□□□ 0.28
DEPDC5-219ENST00000494060 MAP3K13O43283 966 aa16.77■□□□□ 0.28
DEPDC5-219ENST00000494060 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
DEPDC5-219ENST00000494060 FGD5Q6ZNL6 1462 aa16.74■□□□□ 0.27
DEPDC5-219ENST00000494060 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
DEPDC5-219ENST00000494060 SOGA1O94964 1423 aa16.73■□□□□ 0.27
DEPDC5-219ENST00000494060 RASEFQ8IZ41 740 aa16.72■□□□□ 0.27
DEPDC5-219ENST00000494060 COLQQ9Y215 455 aaPredicted RBP16.72■□□□□ 0.27
DEPDC5-219ENST00000494060 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
DEPDC5-219ENST00000494060 RIMBP3CA6NJZ7 1639 aa16.71■□□□□ 0.27
DEPDC5-219ENST00000494060 RIMBP3BA6NNM3 1639 aa16.71■□□□□ 0.27
DEPDC5-219ENST00000494060 RIMBP3Q9UFD9 1639 aa16.71■□□□□ 0.27
DEPDC5-219ENST00000494060 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
DEPDC5-219ENST00000494060 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
DEPDC5-219ENST00000494060 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
DEPDC5-219ENST00000494060 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
DEPDC5-219ENST00000494060 TOP2BQ02880 1626 aa16.69■□□□□ 0.26
DEPDC5-219ENST00000494060 TIE1P35590 1138 aa16.68■□□□□ 0.26
DEPDC5-219ENST00000494060 ARHGEF11O15085 1522 aa16.67■□□□□ 0.26
DEPDC5-219ENST00000494060 TTLL13PA6NNM8 815 aa16.64■□□□□ 0.25
DEPDC5-219ENST00000494060 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
DEPDC5-219ENST00000494060 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
DEPDC5-219ENST00000494060 MIER1Q8N108 512 aa16.59■□□□□ 0.25
DEPDC5-219ENST00000494060 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
DEPDC5-219ENST00000494060 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
DEPDC5-219ENST00000494060 GAPVD1Q14C86 1478 aa16.55■□□□□ 0.24
DEPDC5-219ENST00000494060 SEC24BO95487 1268 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms