RNA–Protein interactions for RNA: ENST00000494060.1

DEPDC5-219, Transcript of DEP domain containing 5, humanhuman

TSL 5

Gene DEPDC5, Length 750 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-219ENST00000494060 AEBP2Q6ZN18 517 aaPredicted RBP35.58■■■■□ 3.29
DEPDC5-219ENST00000494060 CHIC1Q5VXU3 224 aa33.08■■■□□ 2.89
DEPDC5-219ENST00000494060 SENP3Q9H4L4 574 aaPredicted RBP30.23■■■□□ 2.43
DEPDC5-219ENST00000494060 PHF23Q9BUL5 403 aaPredicted RBP29.86■■■□□ 2.37
DEPDC5-219ENST00000494060 FOXD1Q16676 465 aa28.4■■■□□ 2.14
DEPDC5-219ENST00000494060 POTEDQ86YR6 584 aa27.17■■□□□ 1.94
DEPDC5-219ENST00000494060 MSH5O43196 834 aa26.63■■□□□ 1.85
DEPDC5-219ENST00000494060 PIAS4Q8N2W9 510 aaPredicted RBP26.3■■□□□ 1.8
DEPDC5-219ENST00000494060 PPP6R1Q9UPN7 881 aa26.18■■□□□ 1.78
DEPDC5-219ENST00000494060 PLPPR3Q6T4P5 718 aa26.08■■□□□ 1.77
DEPDC5-219ENST00000494060 ADRA2BP18089 450 aa26.01■■□□□ 1.75
DEPDC5-219ENST00000494060 MAPK8IP2Q13387 824 aaPredicted RBP24.12■■□□□ 1.45
DEPDC5-219ENST00000494060 DMRT2Q9Y5R5 561 aa23.93■■□□□ 1.42
DEPDC5-219ENST00000494060 SCAF1Q9H7N4 1312 aaKnown RBP23.56■■□□□ 1.36
DEPDC5-219ENST00000494060 CACNB1Q02641 598 aaPredicted RBP23.28■■□□□ 1.32
DEPDC5-219ENST00000494060 NISCHQ9Y2I1 1504 aa23.25■■□□□ 1.31
DEPDC5-219ENST00000494060 DCAF8L1A6NGE4 600 aa22.97■■□□□ 1.27
DEPDC5-219ENST00000494060 PPP4R3CPQ6ZMV5 832 aa22.85■■□□□ 1.25
DEPDC5-219ENST00000494060 HOXD11P31277 338 aaPredicted RBP22.83■■□□□ 1.25
DEPDC5-219ENST00000494060 RNF39Q9H2S5 420 aa22.77■■□□□ 1.24
DEPDC5-219ENST00000494060 CNKSR2Q8WXI2 1034 aa22.5■■□□□ 1.19
DEPDC5-219ENST00000494060 RNF216Q9NWF9 866 aaPredicted RBP22.46■■□□□ 1.19
DEPDC5-219ENST00000494060 C1QBPQ07021 282 aaKnown RBP22.31■■□□□ 1.16
DEPDC5-219ENST00000494060 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
DEPDC5-219ENST00000494060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.7■■□□□ 1.06
DEPDC5-219ENST00000494060 NCBP3Q53F19 620 aaKnown RBP21.65■■□□□ 1.06
DEPDC5-219ENST00000494060 NPM3O75607 178 aaKnown RBP21.51■■□□□ 1.03
DEPDC5-219ENST00000494060 U3KPZ7 1027 aaPredicted RBP21.28■■□□□ 1
DEPDC5-219ENST00000494060 SPINK5Q9NQ38 1064 aaPredicted RBP21.19■□□□□ 0.98
DEPDC5-219ENST00000494060 DSG3P32926 999 aa21.14■□□□□ 0.97
DEPDC5-219ENST00000494060 POTEHQ6S545 545 aa21.12■□□□□ 0.97
DEPDC5-219ENST00000494060 CAPN15O75808 1086 aa21.07■□□□□ 0.96
DEPDC5-219ENST00000494060 CCDC180Q9P1Z9 1646 aa20.76■□□□□ 0.91
DEPDC5-219ENST00000494060 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
DEPDC5-219ENST00000494060 ABCC9O60706 1549 aa20.7■□□□□ 0.9
DEPDC5-219ENST00000494060 ABCB7O75027 752 aa20.61■□□□□ 0.89
DEPDC5-219ENST00000494060 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
DEPDC5-219ENST00000494060 KCNA4P22459 653 aa20.61■□□□□ 0.89
DEPDC5-219ENST00000494060 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
DEPDC5-219ENST00000494060 APLP2Q06481 763 aa20.34■□□□□ 0.85
DEPDC5-219ENST00000494060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
DEPDC5-219ENST00000494060 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
DEPDC5-219ENST00000494060 SAMD1Q6SPF0 538 aaPredicted RBP20.15■□□□□ 0.82
DEPDC5-219ENST00000494060 RBM42Q9BTD8 480 aaKnown RBP20.01■□□□□ 0.79
DEPDC5-219ENST00000494060 CHRDL2Q6WN34 429 aa19.94■□□□□ 0.78
DEPDC5-219ENST00000494060 POLA2Q14181 598 aa19.93■□□□□ 0.78
DEPDC5-219ENST00000494060 MYCNP04198 464 aaPredicted RBP19.8■□□□□ 0.76
DEPDC5-219ENST00000494060 ATF5Q9Y2D1 282 aaPredicted RBP19.61■□□□□ 0.73
DEPDC5-219ENST00000494060 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
DEPDC5-219ENST00000494060 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
DEPDC5-219ENST00000494060 NACADO15069 1562 aa19.5■□□□□ 0.71
DEPDC5-219ENST00000494060 SP7Q8TDD2 431 aaPredicted RBP19.5■□□□□ 0.71
DEPDC5-219ENST00000494060 AKT1S1Q96B36 256 aa19.5■□□□□ 0.71
DEPDC5-219ENST00000494060 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
DEPDC5-219ENST00000494060 REM2Q8IYK8 340 aaPredicted RBP19.4■□□□□ 0.7
DEPDC5-219ENST00000494060 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
DEPDC5-219ENST00000494060 PIP4P2Q8N4L2 257 aa19.38■□□□□ 0.69
DEPDC5-219ENST00000494060 ZCCHC6Q5VYS8 1495 aaKnown RBP19.36■□□□□ 0.69
DEPDC5-219ENST00000494060 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
DEPDC5-219ENST00000494060 FOXD4L1Q9NU39 408 aa19.3■□□□□ 0.68
DEPDC5-219ENST00000494060 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
DEPDC5-219ENST00000494060 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
DEPDC5-219ENST00000494060 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
DEPDC5-219ENST00000494060 PITPNM1O00562 1244 aa19.22■□□□□ 0.67
DEPDC5-219ENST00000494060 FXR2P51116 673 aaKnown RBP eCLIP19.15■□□□□ 0.66
DEPDC5-219ENST00000494060 HAX1O00165 279 aa19.14■□□□□ 0.65
DEPDC5-219ENST00000494060 EVX2Q03828 476 aa19.04■□□□□ 0.64
DEPDC5-219ENST00000494060 UNC13AQ9UPW8 1703 aa19.04■□□□□ 0.64
DEPDC5-219ENST00000494060 ZBTB22O15209 634 aa19.01■□□□□ 0.63
DEPDC5-219ENST00000494060 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
DEPDC5-219ENST00000494060 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
DEPDC5-219ENST00000494060 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
DEPDC5-219ENST00000494060 SPDYE2BA6NHP3 402 aa18.74■□□□□ 0.59
DEPDC5-219ENST00000494060 SPDYE6P0CI01 402 aa18.74■□□□□ 0.59
DEPDC5-219ENST00000494060 SPDYE2Q495Y8 402 aa18.74■□□□□ 0.59
DEPDC5-219ENST00000494060 ATXN8OSP0DMR3 200 aa18.71■□□□□ 0.59
DEPDC5-219ENST00000494060 PRKAR2AP13861 404 aaKnown RBP18.68■□□□□ 0.58
DEPDC5-219ENST00000494060 FBLN2P98095 1184 aa18.63■□□□□ 0.57
DEPDC5-219ENST00000494060 MKRN4PQ13434 485 aaPredicted RBP18.63■□□□□ 0.57
DEPDC5-219ENST00000494060 CLEC11AQ9Y240 323 aa18.62■□□□□ 0.57
DEPDC5-219ENST00000494060 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
DEPDC5-219ENST00000494060 C19orf67A6NJJ6 358 aa18.56■□□□□ 0.56
DEPDC5-219ENST00000494060 SPDYE1Q8NFV5 336 aaPredicted RBP18.55■□□□□ 0.56
DEPDC5-219ENST00000494060 CC2D2AQ9P2K1 1620 aa18.55■□□□□ 0.56
DEPDC5-219ENST00000494060 SSUH2Q9Y2M2 353 aa18.5■□□□□ 0.55
DEPDC5-219ENST00000494060 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
DEPDC5-219ENST00000494060 GABBR2O75899 941 aa18.45■□□□□ 0.54
DEPDC5-219ENST00000494060 EIF4G1Q04637 1599 aaKnown RBP18.45■□□□□ 0.54
DEPDC5-219ENST00000494060 CHADLQ6NUI6 762 aa18.42■□□□□ 0.54
DEPDC5-219ENST00000494060 LHX8Q68G74 356 aa18.3■□□□□ 0.52
DEPDC5-219ENST00000494060 PRR29P0C7W0 189 aa18.19■□□□□ 0.5
DEPDC5-219ENST00000494060 POTEIP0CG38 1075 aa18.15■□□□□ 0.5
DEPDC5-219ENST00000494060 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
DEPDC5-219ENST00000494060 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
DEPDC5-219ENST00000494060 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
DEPDC5-219ENST00000494060 CD44P16070 742 aaKnown RBP18.03■□□□□ 0.48
DEPDC5-219ENST00000494060 FARP1Q9Y4F1 1045 aaPredicted RBP18.01■□□□□ 0.47
DEPDC5-219ENST00000494060 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
DEPDC5-219ENST00000494060 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
DEPDC5-219ENST00000494060 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms