RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.07
COL2A1-208ENST00000493991 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
COL2A1-208ENST00000493991 FHOD3Q2V2M9 1422 aa15.48■□□□□ 0.07
COL2A1-208ENST00000493991 KCNH8Q96L42 1107 aa15.48■□□□□ 0.07
COL2A1-208ENST00000493991 SENP3Q9H4L4 574 aaPredicted RBP15.47■□□□□ 0.07
COL2A1-208ENST00000493991 CDK11AQ9UQ88 783 aaPredicted RBP15.47■□□□□ 0.07
COL2A1-208ENST00000493991 KDM2AQ9Y2K7 1162 aa15.46■□□□□ 0.07
COL2A1-208ENST00000493991 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
COL2A1-208ENST00000493991 EIF4G1Q04637 1599 aaKnown RBP15.44■□□□□ 0.06
COL2A1-208ENST00000493991 IGF1RP08069 1367 aa15.44■□□□□ 0.06
COL2A1-208ENST00000493991 FKBP8Q14318 412 aa15.44■□□□□ 0.06
COL2A1-208ENST00000493991 SLC4A1APQ9BWU0 796 aaKnown RBP15.44■□□□□ 0.06
COL2A1-208ENST00000493991 NESP48681 1621 aa15.42■□□□□ 0.06
COL2A1-208ENST00000493991 FANCD2Q9BXW9 1451 aa15.39■□□□□ 0.05
COL2A1-208ENST00000493991 NCAPD3P42695 1498 aa15.39■□□□□ 0.05
COL2A1-208ENST00000493991 FAM9BQ8IZU0 186 aa15.38■□□□□ 0.05
COL2A1-208ENST00000493991 SALL2Q9Y467 1007 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-208ENST00000493991 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
COL2A1-208ENST00000493991 IRX6P78412 446 aaPredicted RBP15.36■□□□□ 0.05
COL2A1-208ENST00000493991 FGD5Q6ZNL6 1462 aa15.36■□□□□ 0.05
COL2A1-208ENST00000493991 CFDP1Q9UEE9 299 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-208ENST00000493991 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
COL2A1-208ENST00000493991 HNRNPUQ00839 825 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL2A1-208ENST00000493991 RGL3Q3MIN7 710 aa15.34■□□□□ 0.05
COL2A1-208ENST00000493991 ARAP1Q96P48 1450 aa15.31■□□□□ 0.04
COL2A1-208ENST00000493991 TSPY4P0CV99 314 aa15.3■□□□□ 0.04
COL2A1-208ENST00000493991 TSPY10P0CW01 314 aa15.3■□□□□ 0.04
COL2A1-208ENST00000493991 PLEKHD1A6NEE1 506 aa15.3■□□□□ 0.04
COL2A1-208ENST00000493991 KIF21BO75037 1637 aa15.29■□□□□ 0.04
COL2A1-208ENST00000493991 BCL11AQ9H165 835 aa15.29■□□□□ 0.04
COL2A1-208ENST00000493991 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
COL2A1-208ENST00000493991 UNC13AQ9UPW8 1703 aa15.28■□□□□ 0.04
COL2A1-208ENST00000493991 DHX57Q6P158 1386 aaKnown RBP15.28■□□□□ 0.04
COL2A1-208ENST00000493991 PDS5BQ9NTI5 1447 aa15.28■□□□□ 0.04
COL2A1-208ENST00000493991 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
COL2A1-208ENST00000493991 CUX1P39880 1505 aa15.27■□□□□ 0.04
COL2A1-208ENST00000493991 CHGAP10645 457 aaKnown RBP15.26■□□□□ 0.03
COL2A1-208ENST00000493991 CFTRP13569 1480 aa15.26■□□□□ 0.03
COL2A1-208ENST00000493991 SETD5Q9C0A6 1442 aa15.25■□□□□ 0.03
COL2A1-208ENST00000493991 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL2A1-208ENST00000493991 PHLDB1Q86UU1 1377 aa15.22■□□□□ 0.03
COL2A1-208ENST00000493991 EIF4G2P78344 907 aaKnown RBP eCLIP15.21■□□□□ 0.02
COL2A1-208ENST00000493991 ZNF644Q9H582 1327 aaPredicted RBP15.2■□□□□ 0.02
COL2A1-208ENST00000493991 MRS2Q9HD23 443 aa15.2■□□□□ 0.02
COL2A1-208ENST00000493991 ARHGAP35Q9NRY4 1499 aa15.19■□□□□ 0.02
COL2A1-208ENST00000493991 PLPPR3Q6T4P5 718 aa15.19■□□□□ 0.02
COL2A1-208ENST00000493991 PRXQ9BXM0 1461 aa15.18■□□□□ 0.02
COL2A1-208ENST00000493991 ANP32EQ9BTT0 268 aa15.18■□□□□ 0.02
COL2A1-208ENST00000493991 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
COL2A1-208ENST00000493991 JPH4Q96JJ6 628 aa15.14■□□□□ 0.01
COL2A1-208ENST00000493991 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
COL2A1-208ENST00000493991 PPP1R15AO75807 674 aaPredicted RBP15.13■□□□□ 0.01
COL2A1-208ENST00000493991 MPHOSPH9Q99550 1183 aa15.12■□□□□ 0.01
COL2A1-208ENST00000493991 FMN1Q68DA7 1419 aa15.12■□□□□ 0.01
COL2A1-208ENST00000493991 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
COL2A1-208ENST00000493991 GAPVD1Q14C86 1478 aa15.11■□□□□ 0.01
COL2A1-208ENST00000493991 HNRNPMP52272 730 aaKnown RBP eCLIP15.11■□□□□ 0.01
COL2A1-208ENST00000493991 HSPA5P11021 654 aaKnown RBP15.1■□□□□ 0.01
COL2A1-208ENST00000493991 L3MBTL2Q969R5 705 aa15.1■□□□□ 0.01
COL2A1-208ENST00000493991 TSHZ2Q9NRE2 1034 aa15.1■□□□□ 0.01
COL2A1-208ENST00000493991 PKD2Q13563 968 aa15.1■□□□□ 0.01
COL2A1-208ENST00000493991 NBR1Q14596 966 aa15.09■□□□□ 0.01
COL2A1-208ENST00000493991 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0
COL2A1-208ENST00000493991 TMC1Q8TDI8 760 aa15.07■□□□□ 0
COL2A1-208ENST00000493991 DCAF11Q8TEB1 546 aa15.07■□□□□ 0
COL2A1-208ENST00000493991 CARD11Q9BXL7 1154 aa15.06■□□□□ 0
COL2A1-208ENST00000493991 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
COL2A1-208ENST00000493991 TOPBP1Q92547 1522 aa15.03■□□□□ -0
COL2A1-208ENST00000493991 HMGXB3Q12766 1538 aa15.03■□□□□ -0
COL2A1-208ENST00000493991 LRRC9Q6ZRR7 1453 aa15.02□□□□□ -0.01
COL2A1-208ENST00000493991 NPM2Q86SE8 214 aaKnown RBP14.99□□□□□ -0.01
COL2A1-208ENST00000493991 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
COL2A1-208ENST00000493991 NUP155O75694 1391 aa14.97□□□□□ -0.01
COL2A1-208ENST00000493991 RTL5Q5HYW3 569 aaPredicted RBP14.96□□□□□ -0.01
COL2A1-208ENST00000493991 RBM19Q9Y4C8 960 aaKnown RBP14.95□□□□□ -0.02
COL2A1-208ENST00000493991 ERICH3Q5RHP9 1530 aa14.95□□□□□ -0.02
COL2A1-208ENST00000493991 FGD6Q6ZV73 1430 aa14.94□□□□□ -0.02
COL2A1-208ENST00000493991 CC2D1BQ5T0F9 858 aaKnown RBP14.94□□□□□ -0.02
COL2A1-208ENST00000493991 RRBP1Q9P2E9 1410 aaKnown RBP14.91□□□□□ -0.02
COL2A1-208ENST00000493991 CCDC18Q5T9S5 1454 aa14.91□□□□□ -0.02
COL2A1-208ENST00000493991 RTN4Q9NQC3 1192 aaKnown RBP14.9□□□□□ -0.02
COL2A1-208ENST00000493991 STAG3Q9UJ98 1225 aa14.9□□□□□ -0.02
COL2A1-208ENST00000493991 EIF5BO60841 1220 aaKnown RBP14.9□□□□□ -0.02
COL2A1-208ENST00000493991 CARMIL2Q6F5E8 1435 aa14.9□□□□□ -0.02
COL2A1-208ENST00000493991 TNNT2P45379 298 aaPredicted RBP14.89□□□□□ -0.03
COL2A1-208ENST00000493991 GGT6Q6P531 493 aa14.88□□□□□ -0.03
COL2A1-208ENST00000493991 NCOA2Q15596 1464 aa14.88□□□□□ -0.03
COL2A1-208ENST00000493991 TIMELESSQ9UNS1 1208 aa14.87□□□□□ -0.03
COL2A1-208ENST00000493991 CASKIN1Q8WXD9 1431 aa14.87□□□□□ -0.03
COL2A1-208ENST00000493991 SAFB2Q14151 953 aaKnown RBP eCLIP14.86□□□□□ -0.03
COL2A1-208ENST00000493991 NUTM2DQ5VT03 806 aaPredicted RBP14.86□□□□□ -0.03
COL2A1-208ENST00000493991 URB2Q14146 1524 aaKnown RBP14.86□□□□□ -0.03
COL2A1-208ENST00000493991 B4GALNT3Q6L9W6 998 aa14.86□□□□□ -0.03
COL2A1-208ENST00000493991 MYOM3Q5VTT5 1437 aa14.85□□□□□ -0.03
COL2A1-208ENST00000493991 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
COL2A1-208ENST00000493991 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
COL2A1-208ENST00000493991 CCDC136Q96JN2 1154 aa14.83□□□□□ -0.04
COL2A1-208ENST00000493991 ST20-MTHFSA0A0A6YYL1 179 aa14.83□□□□□ -0.04
COL2A1-208ENST00000493991 MLECQ14165 292 aa14.83□□□□□ -0.04
COL2A1-208ENST00000493991 PTPRGP23470 1445 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms