RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 CHD1O14646 1710 aa10.29□□□□□ -0.76
RTN4IP1-202ENST00000493619 SYNJ2O15056 1496 aa10.29□□□□□ -0.76
RTN4IP1-202ENST00000493619 CUX1P39880 1505 aa10.28□□□□□ -0.76
RTN4IP1-202ENST00000493619 WRNQ14191 1432 aaPredicted RBP eCLIP10.27□□□□□ -0.77
RTN4IP1-202ENST00000493619 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.27□□□□□ -0.77
RTN4IP1-202ENST00000493619 HNRNPUL2Q1KMD3 747 aaKnown RBP10.27□□□□□ -0.77
RTN4IP1-202ENST00000493619 AQRO60306 1485 aaKnown RBP eCLIP10.27□□□□□ -0.77
RTN4IP1-202ENST00000493619 TRIM41Q8WV44 630 aa10.26□□□□□ -0.77
RTN4IP1-202ENST00000493619 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
RTN4IP1-202ENST00000493619 GAPVD1Q14C86 1478 aa10.24□□□□□ -0.77
RTN4IP1-202ENST00000493619 SNAPC4Q5SXM2 1469 aa10.24□□□□□ -0.77
RTN4IP1-202ENST00000493619 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
RTN4IP1-202ENST00000493619 TOP2BQ02880 1626 aa10.24□□□□□ -0.77
RTN4IP1-202ENST00000493619 ABCA5Q8WWZ7 1642 aa10.24□□□□□ -0.77
RTN4IP1-202ENST00000493619 PBRM1Q86U86 1689 aa10.24□□□□□ -0.77
RTN4IP1-202ENST00000493619 CLASP1Q7Z460 1538 aa10.23□□□□□ -0.77
RTN4IP1-202ENST00000493619 TRHP20396 242 aaPredicted RBP10.23□□□□□ -0.77
RTN4IP1-202ENST00000493619 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
RTN4IP1-202ENST00000493619 RAD54L2Q9Y4B4 1467 aa10.22□□□□□ -0.77
RTN4IP1-202ENST00000493619 ERICH3Q5RHP9 1530 aa10.22□□□□□ -0.77
RTN4IP1-202ENST00000493619 TDRD9Q8NDG6 1382 aaKnown RBP10.21□□□□□ -0.78
RTN4IP1-202ENST00000493619 SAMD1Q6SPF0 538 aaPredicted RBP10.19□□□□□ -0.78
RTN4IP1-202ENST00000493619 FBLN2P98095 1184 aa10.18□□□□□ -0.78
RTN4IP1-202ENST00000493619 FHAD1B1AJZ9 1412 aa10.16□□□□□ -0.78
RTN4IP1-202ENST00000493619 ABCB7O75027 752 aa10.16□□□□□ -0.78
RTN4IP1-202ENST00000493619 POTEHQ6S545 545 aa10.16□□□□□ -0.78
RTN4IP1-202ENST00000493619 ARAP1Q96P48 1450 aa10.16□□□□□ -0.78
RTN4IP1-202ENST00000493619 ADAMTS12P58397 1594 aa10.15□□□□□ -0.78
RTN4IP1-202ENST00000493619 GRIN2AQ12879 1464 aa10.15□□□□□ -0.78
RTN4IP1-202ENST00000493619 SUPT5HO00267 1087 aaKnown RBP10.13□□□□□ -0.79
RTN4IP1-202ENST00000493619 CSRNP3Q8WYN3 585 aa10.13□□□□□ -0.79
RTN4IP1-202ENST00000493619 NUP160Q12769 1436 aa10.13□□□□□ -0.79
RTN4IP1-202ENST00000493619 CYB5RLQ6IPT4 315 aa10.12□□□□□ -0.79
RTN4IP1-202ENST00000493619 SHROOM2Q13796 1616 aa10.11□□□□□ -0.79
RTN4IP1-202ENST00000493619 CUL7Q14999 1698 aa10.1□□□□□ -0.79
RTN4IP1-202ENST00000493619 SLC4A1APQ9BWU0 796 aaKnown RBP10.07□□□□□ -0.8
RTN4IP1-202ENST00000493619 KIF27Q86VH2 1401 aa10.06□□□□□ -0.8
RTN4IP1-202ENST00000493619 MYCNP04198 464 aaPredicted RBP10.04□□□□□ -0.8
RTN4IP1-202ENST00000493619 CEP170Q5SW79 1584 aa10.04□□□□□ -0.8
RTN4IP1-202ENST00000493619 RUSC2Q8N2Y8 1516 aa10.02□□□□□ -0.81
RTN4IP1-202ENST00000493619 KIAA0586Q9BVV6 1533 aa10.01□□□□□ -0.81
RTN4IP1-202ENST00000493619 JPH4Q96JJ6 628 aa9.97□□□□□ -0.81
RTN4IP1-202ENST00000493619 CARMIL2Q6F5E8 1435 aa9.97□□□□□ -0.81
RTN4IP1-202ENST00000493619 MAPKBP1O60336 1514 aa9.97□□□□□ -0.81
RTN4IP1-202ENST00000493619 NPM1P06748 294 aaKnown RBP eCLIP9.96□□□□□ -0.82
RTN4IP1-202ENST00000493619 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
RTN4IP1-202ENST00000493619 PRG4Q92954 1404 aaPredicted RBP9.96□□□□□ -0.82
RTN4IP1-202ENST00000493619 POLA2Q14181 598 aa9.95□□□□□ -0.82
RTN4IP1-202ENST00000493619 IGF1RP08069 1367 aa9.94□□□□□ -0.82
RTN4IP1-202ENST00000493619 CARMIL1Q5VZK9 1371 aa9.9□□□□□ -0.82
RTN4IP1-202ENST00000493619 FAM9AQ8IZU1 332 aaPredicted RBP9.9□□□□□ -0.82
RTN4IP1-202ENST00000493619 IQGAP2Q13576 1575 aa9.89□□□□□ -0.83
RTN4IP1-202ENST00000493619 ABCC10Q5T3U5 1492 aa9.89□□□□□ -0.83
RTN4IP1-202ENST00000493619 UHRF1BP1LA0JNW5 1464 aa9.88□□□□□ -0.83
RTN4IP1-202ENST00000493619 FOXD4L1Q9NU39 408 aa9.88□□□□□ -0.83
RTN4IP1-202ENST00000493619 ERCC6L2Q5T890 1561 aa9.88□□□□□ -0.83
RTN4IP1-202ENST00000493619 TNIKQ9UKE5 1360 aa9.88□□□□□ -0.83
RTN4IP1-202ENST00000493619 RAPGEF2Q9Y4G8 1499 aa9.87□□□□□ -0.83
RTN4IP1-202ENST00000493619 GOLGA3Q08378 1498 aa9.86□□□□□ -0.83
RTN4IP1-202ENST00000493619 UGGT2Q9NYU1 1516 aa9.86□□□□□ -0.83
RTN4IP1-202ENST00000493619 PLB1Q6P1J6 1458 aa9.85□□□□□ -0.83
RTN4IP1-202ENST00000493619 PTPRGP23470 1445 aa9.85□□□□□ -0.83
RTN4IP1-202ENST00000493619 KIF13AQ9H1H9 1805 aa9.85□□□□□ -0.83
RTN4IP1-202ENST00000493619 ABCC2Q92887 1545 aa9.84□□□□□ -0.83
RTN4IP1-202ENST00000493619 ADCY10Q96PN6 1610 aa9.84□□□□□ -0.83
RTN4IP1-202ENST00000493619 DIP2BQ9P265 1576 aa9.84□□□□□ -0.83
RTN4IP1-202ENST00000493619 EEA1Q15075 1411 aa9.83□□□□□ -0.84
RTN4IP1-202ENST00000493619 GLI2P10070 1586 aa9.83□□□□□ -0.84
RTN4IP1-202ENST00000493619 CTTNBP2Q8WZ74 1663 aa9.81□□□□□ -0.84
RTN4IP1-202ENST00000493619 UACAQ9BZF9 1416 aa9.81□□□□□ -0.84
RTN4IP1-202ENST00000493619 SLC24A1O60721 1099 aa9.8□□□□□ -0.84
RTN4IP1-202ENST00000493619 ATF5Q9Y2D1 282 aaPredicted RBP9.8□□□□□ -0.84
RTN4IP1-202ENST00000493619 TEX14Q8IWB6 1497 aa9.79□□□□□ -0.84
RTN4IP1-202ENST00000493619 KDM5BQ9UGL1 1544 aa9.78□□□□□ -0.84
RTN4IP1-202ENST00000493619 KIAA0556O60303 1618 aa9.78□□□□□ -0.84
RTN4IP1-202ENST00000493619 FAM69CQ0P6D2 419 aa9.77□□□□□ -0.85
RTN4IP1-202ENST00000493619 CHRDL2Q6WN34 429 aa9.77□□□□□ -0.85
RTN4IP1-202ENST00000493619 DISP1Q96F81 1524 aa9.77□□□□□ -0.85
RTN4IP1-202ENST00000493619 KDM6BO15054 1643 aa9.76□□□□□ -0.85
RTN4IP1-202ENST00000493619 ZBTB12Q9Y330 459 aaPredicted RBP9.76□□□□□ -0.85
RTN4IP1-202ENST00000493619 PRXQ9BXM0 1461 aa9.76□□□□□ -0.85
RTN4IP1-202ENST00000493619 PHLDB1Q86UU1 1377 aa9.73□□□□□ -0.85
RTN4IP1-202ENST00000493619 ASXL2Q76L83 1435 aa9.73□□□□□ -0.85
RTN4IP1-202ENST00000493619 WDR7Q9Y4E6 1490 aa9.71□□□□□ -0.86
RTN4IP1-202ENST00000493619 MAP3K4Q9Y6R4 1608 aa9.71□□□□□ -0.86
RTN4IP1-202ENST00000493619 CFAP43Q8NDM7 1665 aa9.71□□□□□ -0.86
RTN4IP1-202ENST00000493619 AKT1S1Q96B36 256 aa9.7□□□□□ -0.86
RTN4IP1-202ENST00000493619 EPRSP07814 1512 aaKnown RBP9.7□□□□□ -0.86
RTN4IP1-202ENST00000493619 ZCCHC11Q5TAX3 1644 aaKnown RBP9.7□□□□□ -0.86
RTN4IP1-202ENST00000493619 ABCA8O94911 1581 aa9.68□□□□□ -0.86
RTN4IP1-202ENST00000493619 MAGI3Q5TCQ9 1506 aa9.68□□□□□ -0.86
RTN4IP1-202ENST00000493619 EFCAB5A4FU69 1503 aa9.67□□□□□ -0.86
RTN4IP1-202ENST00000493619 ZBTB22O15209 634 aa9.67□□□□□ -0.86
RTN4IP1-202ENST00000493619 SAMD9Q5K651 1589 aa9.66□□□□□ -0.86
RTN4IP1-202ENST00000493619 TSPOAP1O95153 1857 aa9.64□□□□□ -0.87
RTN4IP1-202ENST00000493619 KIF21BO75037 1637 aa9.64□□□□□ -0.87
RTN4IP1-202ENST00000493619 PPRC1Q5VV67 1664 aaKnown RBP9.63□□□□□ -0.87
RTN4IP1-202ENST00000493619 ATXN8OSP0DMR3 200 aa9.61□□□□□ -0.87
RTN4IP1-202ENST00000493619 CD109Q6YHK3 1445 aa9.61□□□□□ -0.87
RTN4IP1-202ENST00000493619 CFAP74Q9C0B2 1584 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms