RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 ARHGAP35Q9NRY4 1499 aa20.8■□□□□ 0.92
SMTN-219ENST00000493335 SETD5Q9C0A6 1442 aa20.8■□□□□ 0.92
SMTN-219ENST00000493335 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
SMTN-219ENST00000493335 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
SMTN-219ENST00000493335 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
SMTN-219ENST00000493335 PPP1R15AO75807 674 aaPredicted RBP20.77■□□□□ 0.92
SMTN-219ENST00000493335 MAPKBP1O60336 1514 aa20.76■□□□□ 0.91
SMTN-219ENST00000493335 HNRNPUQ00839 825 aaKnown RBP eCLIP20.74■□□□□ 0.91
SMTN-219ENST00000493335 PHLDB1Q86UU1 1377 aa20.74■□□□□ 0.91
SMTN-219ENST00000493335 ERICH6Q7L0X2 663 aa20.71■□□□□ 0.91
SMTN-219ENST00000493335 CUX2O14529 1486 aa20.7■□□□□ 0.91
SMTN-219ENST00000493335 CUX1P39880 1505 aa20.69■□□□□ 0.9
SMTN-219ENST00000493335 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
SMTN-219ENST00000493335 CCER2I3L3R5 266 aa20.64■□□□□ 0.9
SMTN-219ENST00000493335 CNGB1Q14028 1251 aaPredicted RBP20.62■□□□□ 0.89
SMTN-219ENST00000493335 CDK11AQ9UQ88 783 aaPredicted RBP20.61■□□□□ 0.89
SMTN-219ENST00000493335 MSH5O43196 834 aa20.61■□□□□ 0.89
SMTN-219ENST00000493335 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
SMTN-219ENST00000493335 IGF1RP08069 1367 aa20.6■□□□□ 0.89
SMTN-219ENST00000493335 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
SMTN-219ENST00000493335 LRRC9Q6ZRR7 1453 aa20.59■□□□□ 0.89
SMTN-219ENST00000493335 TIAM1Q13009 1591 aa20.55■□□□□ 0.88
SMTN-219ENST00000493335 TIMELESSQ9UNS1 1208 aa20.52■□□□□ 0.88
SMTN-219ENST00000493335 FHOD3Q2V2M9 1422 aa20.51■□□□□ 0.87
SMTN-219ENST00000493335 FAM9BQ8IZU0 186 aa20.51■□□□□ 0.87
SMTN-219ENST00000493335 CHIC2Q9UKJ5 165 aa20.5■□□□□ 0.87
SMTN-219ENST00000493335 FHAD1B1AJZ9 1412 aa20.46■□□□□ 0.87
SMTN-219ENST00000493335 SENP3-EIF4A1A0A087X0R7 540 aa20.45■□□□□ 0.86
SMTN-219ENST00000493335 RRP7BPQ9NSQ0 103 aa20.45■□□□□ 0.86
SMTN-219ENST00000493335 B4GALNT3Q6L9W6 998 aa20.45■□□□□ 0.86
SMTN-219ENST00000493335 CCDC184Q52MB2 194 aa20.42■□□□□ 0.86
SMTN-219ENST00000493335 MTUS2Q5JR59 1369 aa20.42■□□□□ 0.86
SMTN-219ENST00000493335 HSPA5P11021 654 aaKnown RBP20.41■□□□□ 0.86
SMTN-219ENST00000493335 CFTRP13569 1480 aa20.4■□□□□ 0.86
SMTN-219ENST00000493335 NCAPD3P42695 1498 aa20.4■□□□□ 0.86
SMTN-219ENST00000493335 ARID3CA6NKF2 412 aa20.4■□□□□ 0.86
SMTN-219ENST00000493335 POLR3GLQ9BT43 218 aa20.39■□□□□ 0.85
SMTN-219ENST00000493335 MRS2Q9HD23 443 aa20.37■□□□□ 0.85
SMTN-219ENST00000493335 WASHC2AQ641Q2 1341 aa20.36■□□□□ 0.85
SMTN-219ENST00000493335 CCDC18Q5T9S5 1454 aa20.36■□□□□ 0.85
SMTN-219ENST00000493335 FOXD1Q16676 465 aa20.36■□□□□ 0.85
SMTN-219ENST00000493335 PCF11O94913 1555 aaKnown RBP20.35■□□□□ 0.85
SMTN-219ENST00000493335 NBR1Q14596 966 aa20.34■□□□□ 0.85
SMTN-219ENST00000493335 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
SMTN-219ENST00000493335 FANCIQ9NVI1 1328 aa20.33■□□□□ 0.84
SMTN-219ENST00000493335 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.84
SMTN-219ENST00000493335 PPP4R2Q9NY27 417 aa20.33■□□□□ 0.84
SMTN-219ENST00000493335 MAP3K1Q13233 1512 aa20.31■□□□□ 0.84
SMTN-219ENST00000493335 FGD6Q6ZV73 1430 aa20.3■□□□□ 0.84
SMTN-219ENST00000493335 PTPRKQ15262 1439 aa20.29■□□□□ 0.84
SMTN-219ENST00000493335 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
SMTN-219ENST00000493335 UACAQ9BZF9 1416 aa20.26■□□□□ 0.83
SMTN-219ENST00000493335 ANO8Q9HCE9 1232 aaPredicted RBP20.26■□□□□ 0.83
SMTN-219ENST00000493335 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.836e-8■■■■■ 63.8
SMTN-219ENST00000493335 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
SMTN-219ENST00000493335 C11orf95C9JLR9 678 aaPredicted RBP20.24■□□□□ 0.83
SMTN-219ENST00000493335 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
SMTN-219ENST00000493335 L3MBTL2Q969R5 705 aa20.22■□□□□ 0.83
SMTN-219ENST00000493335 DEKP35659 375 aaKnown RBP20.21■□□□□ 0.83
SMTN-219ENST00000493335 ZNF326Q5BKZ1 582 aaKnown RBP20.21■□□□□ 0.83
SMTN-219ENST00000493335 PRKRIP1Q9H875 184 aaPredicted RBP20.21■□□□□ 0.83
SMTN-219ENST00000493335 CASKIN1Q8WXD9 1431 aa20.2■□□□□ 0.82
SMTN-219ENST00000493335 HFM1A2PYH4 1435 aa20.19■□□□□ 0.82
SMTN-219ENST00000493335 NAIPQ13075 1403 aa20.19■□□□□ 0.82
SMTN-219ENST00000493335 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
SMTN-219ENST00000493335 FYCO1Q9BQS8 1478 aa20.18■□□□□ 0.82
SMTN-219ENST00000493335 CC2D2AQ9P2K1 1620 aa20.18■□□□□ 0.82
SMTN-219ENST00000493335 FMN1Q68DA7 1419 aa20.16■□□□□ 0.82
SMTN-219ENST00000493335 MPHOSPH9Q99550 1183 aa20.15■□□□□ 0.82
SMTN-219ENST00000493335 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.81
SMTN-219ENST00000493335 CFAP43Q8NDM7 1665 aa20.14■□□□□ 0.81
SMTN-219ENST00000493335 NOP58Q9Y2X3 529 aaKnown RBP20.13■□□□□ 0.81
SMTN-219ENST00000493335 CCDC136Q96JN2 1154 aa20.13■□□□□ 0.81
SMTN-219ENST00000493335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMTN-219ENST00000493335 NCOA2Q15596 1464 aa20.11■□□□□ 0.81
SMTN-219ENST00000493335 PTPN23Q9H3S7 1636 aa20.1■□□□□ 0.81
SMTN-219ENST00000493335 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
SMTN-219ENST00000493335 ERICH6BQ5W0A0 696 aa20.09■□□□□ 0.81
SMTN-219ENST00000493335 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
SMTN-219ENST00000493335 MYOM3Q5VTT5 1437 aa20.09■□□□□ 0.81
SMTN-219ENST00000493335 ZBED9Q6R2W3 1325 aa20.09■□□□□ 0.81
SMTN-219ENST00000493335 NBPF8Q3BBV2 869 aa20.08■□□□□ 0.81
SMTN-219ENST00000493335 CCDC7Q96M83 1385 aa20.08■□□□□ 0.8
SMTN-219ENST00000493335 NPM2Q86SE8 214 aaKnown RBP20.07■□□□□ 0.8
SMTN-219ENST00000493335 SALL2Q9Y467 1007 aaPredicted RBP20.06■□□□□ 0.8
SMTN-219ENST00000493335 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
SMTN-219ENST00000493335 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
SMTN-219ENST00000493335 AKNAQ7Z591 1439 aa20.05■□□□□ 0.8
SMTN-219ENST00000493335 NESP48681 1621 aa20.05■□□□□ 0.8
SMTN-219ENST00000493335 ANP32AP39687 249 aaKnown RBP20.05■□□□□ 0.8
SMTN-219ENST00000493335 KIF7Q2M1P5 1343 aa20.04■□□□□ 0.8
SMTN-219ENST00000493335 MYT1LQ9UL68 1186 aa20.04■□□□□ 0.8
SMTN-219ENST00000493335 RTL5Q5HYW3 569 aaPredicted RBP20.02■□□□□ 0.8
SMTN-219ENST00000493335 EFCAB5A4FU69 1503 aa20■□□□□ 0.79
SMTN-219ENST00000493335 KDM5BQ9UGL1 1544 aa19.99■□□□□ 0.79
SMTN-219ENST00000493335 ZBTB47Q9UFB7 747 aaPredicted RBP19.99■□□□□ 0.79
SMTN-219ENST00000493335 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
SMTN-219ENST00000493335 SNAPC4Q5SXM2 1469 aa19.98■□□□□ 0.79
SMTN-219ENST00000493335 TMC1Q8TDI8 760 aa19.96■□□□□ 0.79
SMTN-219ENST00000493335 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms