RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 SETD5Q9C0A6 1442 aa23.21■■□□□ 1.31
KLF4-204ENST00000493306 ANP32CO43423 234 aa23.2■■□□□ 1.3
KLF4-204ENST00000493306 TRIM52Q96A61 297 aa23.19■■□□□ 1.3
KLF4-204ENST00000493306 ARHGAP35Q9NRY4 1499 aa23.19■■□□□ 1.3
KLF4-204ENST00000493306 TIMELESSQ9UNS1 1208 aa23.17■■□□□ 1.3
KLF4-204ENST00000493306 KIF27Q86VH2 1401 aa23.17■■□□□ 1.3
KLF4-204ENST00000493306 SIN3AQ96ST3 1273 aa23.13■■□□□ 1.29
KLF4-204ENST00000493306 MAP3K1Q13233 1512 aa23.1■■□□□ 1.29
KLF4-204ENST00000493306 TIAM1Q13009 1591 aa23.1■■□□□ 1.29
KLF4-204ENST00000493306 MSH5O43196 834 aa23.07■■□□□ 1.28
KLF4-204ENST00000493306 FANCIQ9NVI1 1328 aa23.07■■□□□ 1.28
KLF4-204ENST00000493306 HIRIP3Q9BW71 556 aaPredicted RBP23.03■■□□□ 1.28
KLF4-204ENST00000493306 CUX1P39880 1505 aa23.03■■□□□ 1.28
KLF4-204ENST00000493306 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
KLF4-204ENST00000493306 FAM50AQ14320 339 aaKnown RBP23.02■■□□□ 1.27
KLF4-204ENST00000493306 LRRC9Q6ZRR7 1453 aa23.01■■□□□ 1.27
KLF4-204ENST00000493306 PHLDB1Q86UU1 1377 aa22.98■■□□□ 1.27
KLF4-204ENST00000493306 MYT1LQ9UL68 1186 aa22.91■■□□□ 1.26
KLF4-204ENST00000493306 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
KLF4-204ENST00000493306 HNRNPUQ00839 825 aaKnown RBP eCLIP22.9■■□□□ 1.26
KLF4-204ENST00000493306 FHAD1B1AJZ9 1412 aa22.88■■□□□ 1.25
KLF4-204ENST00000493306 CFAP43Q8NDM7 1665 aa22.87■■□□□ 1.25
KLF4-204ENST00000493306 ERICH6BQ5W0A0 696 aa22.86■■□□□ 1.25
KLF4-204ENST00000493306 IRX6P78412 446 aaPredicted RBP22.84■■□□□ 1.25
KLF4-204ENST00000493306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.8■■□□□ 1.24
KLF4-204ENST00000493306 IGF1RP08069 1367 aa22.8■■□□□ 1.24
KLF4-204ENST00000493306 PPP4R2Q9NY27 417 aa22.78■■□□□ 1.24
KLF4-204ENST00000493306 PCF11O94913 1555 aaKnown RBP22.77■■□□□ 1.24
KLF4-204ENST00000493306 CARMIL1Q5VZK9 1371 aa22.75■■□□□ 1.23
KLF4-204ENST00000493306 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
KLF4-204ENST00000493306 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
KLF4-204ENST00000493306 CFTRP13569 1480 aa22.73■■□□□ 1.23
KLF4-204ENST00000493306 CCDC18Q5T9S5 1454 aa22.72■■□□□ 1.23
KLF4-204ENST00000493306 UACAQ9BZF9 1416 aa22.7■■□□□ 1.22
KLF4-204ENST00000493306 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
KLF4-204ENST00000493306 DEKP35659 375 aaKnown RBP22.67■■□□□ 1.22
KLF4-204ENST00000493306 FYCO1Q9BQS8 1478 aa22.67■■□□□ 1.22
KLF4-204ENST00000493306 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
KLF4-204ENST00000493306 HFM1A2PYH4 1435 aa22.64■■□□□ 1.21
KLF4-204ENST00000493306 FGD6Q6ZV73 1430 aa22.64■■□□□ 1.21
KLF4-204ENST00000493306 PTPN23Q9H3S7 1636 aa22.6■■□□□ 1.21
KLF4-204ENST00000493306 CASKIN1Q8WXD9 1431 aa22.6■■□□□ 1.21
KLF4-204ENST00000493306 WASHC2AQ641Q2 1341 aa22.6■■□□□ 1.21
KLF4-204ENST00000493306 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
KLF4-204ENST00000493306 FHOD3Q2V2M9 1422 aa22.59■■□□□ 1.21
KLF4-204ENST00000493306 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
KLF4-204ENST00000493306 B4GALNT3Q6L9W6 998 aa22.59■■□□□ 1.21
KLF4-204ENST00000493306 NOP58Q9Y2X3 529 aaKnown RBP22.58■■□□□ 1.21
KLF4-204ENST00000493306 AQRO60306 1485 aaKnown RBP eCLIP22.58■■□□□ 1.21
KLF4-204ENST00000493306 HSPA5P11021 654 aaKnown RBP22.57■■□□□ 1.2
KLF4-204ENST00000493306 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
KLF4-204ENST00000493306 EFCAB5A4FU69 1503 aa22.56■■□□□ 1.2
KLF4-204ENST00000493306 CNTLNQ9NXG0 1405 aa22.56■■□□□ 1.2
KLF4-204ENST00000493306 NCOA2Q15596 1464 aa22.54■■□□□ 1.2
KLF4-204ENST00000493306 ZBED9Q6R2W3 1325 aa22.54■■□□□ 1.2
KLF4-204ENST00000493306 EIF4G2P78344 907 aaKnown RBP eCLIP22.53■■□□□ 1.2
KLF4-204ENST00000493306 NAIPQ13075 1403 aa22.52■■□□□ 1.2
KLF4-204ENST00000493306 PTPRKQ15262 1439 aa22.51■■□□□ 1.19
KLF4-204ENST00000493306 FAM9BQ8IZU0 186 aa22.51■■□□□ 1.19
KLF4-204ENST00000493306 FMN1Q68DA7 1419 aa22.5■■□□□ 1.19
KLF4-204ENST00000493306 MTUS2Q5JR59 1369 aa22.5■■□□□ 1.19
KLF4-204ENST00000493306 CCDC184Q52MB2 194 aa22.5■■□□□ 1.19
KLF4-204ENST00000493306 MRS2Q9HD23 443 aa22.49■■□□□ 1.19
KLF4-204ENST00000493306 NBR1Q14596 966 aa22.48■■□□□ 1.19
KLF4-204ENST00000493306 PRKRIP1Q9H875 184 aaPredicted RBP22.47■■□□□ 1.19
KLF4-204ENST00000493306 MYOM3Q5VTT5 1437 aa22.42■■□□□ 1.18
KLF4-204ENST00000493306 PAK3O75914 559 aaPredicted RBP22.42■■□□□ 1.18
KLF4-204ENST00000493306 ANP32AP39687 249 aaKnown RBP22.41■■□□□ 1.18
KLF4-204ENST00000493306 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
KLF4-204ENST00000493306 NCOA1Q15788 1441 aa22.39■■□□□ 1.18
KLF4-204ENST00000493306 RTL5Q5HYW3 569 aaPredicted RBP22.38■■□□□ 1.17
KLF4-204ENST00000493306 SNAPC4Q5SXM2 1469 aa22.38■■□□□ 1.17
KLF4-204ENST00000493306 CTTNBP2Q8WZ74 1663 aa22.37■■□□□ 1.17
KLF4-204ENST00000493306 HECW1Q76N89 1606 aa22.37■■□□□ 1.17
KLF4-204ENST00000493306 IPO9Q96P70 1041 aaKnown RBP22.36■■□□□ 1.17
KLF4-204ENST00000493306 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
KLF4-204ENST00000493306 SUPT6HQ7KZ85 1726 aaKnown RBP22.34■■□□□ 1.17
KLF4-204ENST00000493306 CCDC136Q96JN2 1154 aa22.33■■□□□ 1.16
KLF4-204ENST00000493306 SMG6Q86US8 1419 aaKnown RBP22.33■■□□□ 1.16
KLF4-204ENST00000493306 C11orf95C9JLR9 678 aaPredicted RBP22.32■■□□□ 1.16
KLF4-204ENST00000493306 ZBTB47Q9UFB7 747 aaPredicted RBP22.32■■□□□ 1.16
KLF4-204ENST00000493306 RRP7BPQ9NSQ0 103 aa22.31■■□□□ 1.16
KLF4-204ENST00000493306 GCC2Q8IWJ2 1684 aa22.31■■□□□ 1.16
KLF4-204ENST00000493306 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
KLF4-204ENST00000493306 CUL7Q14999 1698 aa22.3■■□□□ 1.16
KLF4-204ENST00000493306 L3MBTL2Q969R5 705 aa22.3■■□□□ 1.16
KLF4-204ENST00000493306 EHBP1L1Q8N3D4 1523 aa22.29■■□□□ 1.16
KLF4-204ENST00000493306 AKNAQ7Z591 1439 aa22.28■■□□□ 1.16
KLF4-204ENST00000493306 DENND4BO75064 1496 aaPredicted RBP22.28■■□□□ 1.16
KLF4-204ENST00000493306 NUDCQ9Y266 331 aa22.27■■□□□ 1.16
KLF4-204ENST00000493306 THOC2Q8NI27 1593 aaKnown RBP22.26■■□□□ 1.15
KLF4-204ENST00000493306 LRRIQ1Q96JM4 1722 aa22.25■■□□□ 1.15
KLF4-204ENST00000493306 CHIC2Q9UKJ5 165 aa22.25■■□□□ 1.15
KLF4-204ENST00000493306 ABCA10Q8WWZ4 1543 aa22.25■■□□□ 1.15
KLF4-204ENST00000493306 MPHOSPH9Q99550 1183 aa22.24■■□□□ 1.15
KLF4-204ENST00000493306 RNF123Q5XPI4 1314 aa22.24■■□□□ 1.15
KLF4-204ENST00000493306 POLR1AO95602 1720 aaPredicted RBP22.24■■□□□ 1.15
KLF4-204ENST00000493306 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
KLF4-204ENST00000493306 KIF7Q2M1P5 1343 aa22.23■■□□□ 1.15
KLF4-204ENST00000493306 UGGT2Q9NYU1 1516 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms