RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
RER1-208ENST00000493207 ARHGEF11O15085 1522 aa28■■■□□ 2.07
RER1-208ENST00000493207 SHROOM2Q13796 1616 aa27.96■■■□□ 2.07
RER1-208ENST00000493207 KIAA0586Q9BVV6 1533 aa27.95■■■□□ 2.06
RER1-208ENST00000493207 CTTNBP2Q8WZ74 1663 aa27.91■■■□□ 2.06
RER1-208ENST00000493207 KIF21BO75037 1637 aa27.9■■■□□ 2.06
RER1-208ENST00000493207 IQGAP2Q13576 1575 aa27.88■■■□□ 2.05
RER1-208ENST00000493207 JPH4Q96JJ6 628 aa27.86■■■□□ 2.05
RER1-208ENST00000493207 ERCC6L2Q5T890 1561 aa27.85■■■□□ 2.05
RER1-208ENST00000493207 PRG4Q92954 1404 aaPredicted RBP27.83■■■□□ 2.05
RER1-208ENST00000493207 ARAP1Q96P48 1450 aa27.79■■■□□ 2.04
RER1-208ENST00000493207 EHMT2Q96KQ7 1210 aa27.76■■■□□ 2.03
RER1-208ENST00000493207 GOLGA3Q08378 1498 aa27.73■■■□□ 2.03
RER1-208ENST00000493207 UGGT2Q9NYU1 1516 aa27.71■■■□□ 2.03
RER1-208ENST00000493207 CYB5RLQ6IPT4 315 aa27.7■■■□□ 2.02
RER1-208ENST00000493207 DISP1Q96F81 1524 aa27.65■■■□□ 2.02
RER1-208ENST00000493207 CARMIL2Q6F5E8 1435 aa27.65■■■□□ 2.02
RER1-208ENST00000493207 UBTFP17480 764 aaKnown RBP27.63■■■□□ 2.01
RER1-208ENST00000493207 KIAA0556O60303 1618 aa27.62■■■□□ 2.01
RER1-208ENST00000493207 RANGAP1P46060 587 aaPredicted RBP27.54■■■□□ 2
RER1-208ENST00000493207 TNIKQ9UKE5 1360 aa27.54■■■□□ 2
RER1-208ENST00000493207 TTBK1Q5TCY1 1321 aaPredicted RBP27.52■■■□□ 2
RER1-208ENST00000493207 SAMD9Q5K651 1589 aa27.52■■■□□ 2
RER1-208ENST00000493207 PTPRGP23470 1445 aa27.5■■□□□ 1.99
RER1-208ENST00000493207 P3H3Q8IVL6 736 aa27.45■■□□□ 1.98
RER1-208ENST00000493207 EFCAB5A4FU69 1503 aa27.41■■□□□ 1.98
RER1-208ENST00000493207 ADCY10Q96PN6 1610 aa27.41■■□□□ 1.98
RER1-208ENST00000493207 FHOD3Q2V2M9 1422 aa27.35■■□□□ 1.97
RER1-208ENST00000493207 LOC105371045A0A1W2PR82 267 aa27.35■■□□□ 1.97
RER1-208ENST00000493207 UACAQ9BZF9 1416 aa27.33■■□□□ 1.97
RER1-208ENST00000493207 ARHGAP35Q9NRY4 1499 aa27.32■■□□□ 1.96
RER1-208ENST00000493207 PLB1Q6P1J6 1458 aa27.31■■□□□ 1.96
RER1-208ENST00000493207 ABCC2Q92887 1545 aa27.3■■□□□ 1.96
RER1-208ENST00000493207 UHRF1BP1LA0JNW5 1464 aa27.29■■□□□ 1.96
RER1-208ENST00000493207 ABCA8O94911 1581 aa27.27■■□□□ 1.96
RER1-208ENST00000493207 CLIP1P30622 1438 aa27.24■■□□□ 1.95
RER1-208ENST00000493207 NPM1P06748 294 aaKnown RBP eCLIP27.23■■□□□ 1.95
RER1-208ENST00000493207 RAPGEF6Q8TEU7 1601 aa27.22■■□□□ 1.95
RER1-208ENST00000493207 CEP162Q5TB80 1403 aa27.18■■□□□ 1.94
RER1-208ENST00000493207 ZCCHC11Q5TAX3 1644 aaKnown RBP27.18■■□□□ 1.94
RER1-208ENST00000493207 KDM5BQ9UGL1 1544 aa27.16■■□□□ 1.94
RER1-208ENST00000493207 FMN1Q68DA7 1419 aa27.15■■□□□ 1.94
RER1-208ENST00000493207 MAPKBP1O60336 1514 aa27.14■■□□□ 1.94
RER1-208ENST00000493207 NUP153P49790 1475 aaKnown RBP27.08■■□□□ 1.93
RER1-208ENST00000493207 ARID3CA6NKF2 412 aa27.08■■□□□ 1.93
RER1-208ENST00000493207 TRHP20396 242 aaPredicted RBP27.07■■□□□ 1.92
RER1-208ENST00000493207 ASXL2Q76L83 1435 aa27.05■■□□□ 1.92
RER1-208ENST00000493207 ATP10BO94823 1461 aa27.04■■□□□ 1.92
RER1-208ENST00000493207 HECW1Q76N89 1606 aa27.04■■□□□ 1.92
RER1-208ENST00000493207 PCF11O94913 1555 aaKnown RBP27.02■■□□□ 1.92
RER1-208ENST00000493207 KIF13AQ9H1H9 1805 aa27.01■■□□□ 1.91
RER1-208ENST00000493207 ATP1B4Q9UN42 357 aaPredicted RBP27■■□□□ 1.91
RER1-208ENST00000493207 DIP2BQ9P265 1576 aa26.98■■□□□ 1.91
RER1-208ENST00000493207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.97■■□□□ 1.91
RER1-208ENST00000493207 HNRNPUL2Q1KMD3 747 aaKnown RBP26.97■■□□□ 1.91
RER1-208ENST00000493207 ABCC10Q5T3U5 1492 aa26.97■■□□□ 1.91
RER1-208ENST00000493207 LRRIQ1Q96JM4 1722 aa26.96■■□□□ 1.91
RER1-208ENST00000493207 CASKIN1Q8WXD9 1431 aa26.96■■□□□ 1.91
RER1-208ENST00000493207 WDR7Q9Y4E6 1490 aa26.95■■□□□ 1.91
RER1-208ENST00000493207 CDK13Q14004 1512 aaKnown RBP26.95■■□□□ 1.9
RER1-208ENST00000493207 EPRSP07814 1512 aaKnown RBP26.93■■□□□ 1.9
RER1-208ENST00000493207 FYCO1Q9BQS8 1478 aa26.93■■□□□ 1.9
RER1-208ENST00000493207 FAM69CQ0P6D2 419 aa26.91■■□□□ 1.9
RER1-208ENST00000493207 GLI2P10070 1586 aa26.85■■□□□ 1.89
RER1-208ENST00000493207 KCNH8Q96L42 1107 aa26.84■■□□□ 1.89
RER1-208ENST00000493207 CCDC18Q5T9S5 1454 aa26.84■■□□□ 1.89
RER1-208ENST00000493207 VPS8Q8N3P4 1428 aa26.82■■□□□ 1.88
RER1-208ENST00000493207 PLEKHD1A6NEE1 506 aa26.81■■□□□ 1.88
RER1-208ENST00000493207 TSPOAP1O95153 1857 aa26.81■■□□□ 1.88
RER1-208ENST00000493207 MAP3K4Q9Y6R4 1608 aa26.78■■□□□ 1.88
RER1-208ENST00000493207 CDK11AQ9UQ88 783 aaPredicted RBP26.75■■□□□ 1.87
RER1-208ENST00000493207 CFAP43Q8NDM7 1665 aa26.75■■□□□ 1.87
RER1-208ENST00000493207 ABCA9Q8IUA7 1624 aa26.72■■□□□ 1.87
RER1-208ENST00000493207 PPRC1Q5VV67 1664 aaKnown RBP26.71■■□□□ 1.87
RER1-208ENST00000493207 MAGI3Q5TCQ9 1506 aa26.7■■□□□ 1.86
RER1-208ENST00000493207 TROQ12816 1431 aaPredicted RBP26.69■■□□□ 1.86
RER1-208ENST00000493207 CD109Q6YHK3 1445 aa26.67■■□□□ 1.86
RER1-208ENST00000493207 KIF14Q15058 1648 aa26.67■■□□□ 1.86
RER1-208ENST00000493207 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.66■■□□□ 1.864e-13■■■□□ 16.9
RER1-208ENST00000493207 TTC37Q6PGP7 1564 aa26.65■■□□□ 1.86
RER1-208ENST00000493207 TIAM1Q13009 1591 aa26.63■■□□□ 1.85
RER1-208ENST00000493207 TEX14Q8IWB6 1497 aa26.59■■□□□ 1.85
RER1-208ENST00000493207 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.84
RER1-208ENST00000493207 EHBP1L1Q8N3D4 1523 aa26.56■■□□□ 1.84
RER1-208ENST00000493207 MYO5CQ9NQX4 1742 aa26.55■■□□□ 1.84
RER1-208ENST00000493207 MAP3K1Q13233 1512 aa26.55■■□□□ 1.84
RER1-208ENST00000493207 APLP2Q06481 763 aa26.51■■□□□ 1.83
RER1-208ENST00000493207 LRRC9Q6ZRR7 1453 aa26.49■■□□□ 1.83
RER1-208ENST00000493207 KDM6BO15054 1643 aa26.49■■□□□ 1.83
RER1-208ENST00000493207 SUPT6HQ7KZ85 1726 aaKnown RBP26.47■■□□□ 1.83
RER1-208ENST00000493207 PLCH2O75038 1416 aa26.47■■□□□ 1.83
RER1-208ENST00000493207 CDC42BPAQ5VT25 1732 aa26.46■■□□□ 1.83
RER1-208ENST00000493207 CFAP74Q9C0B2 1584 aa26.46■■□□□ 1.83
RER1-208ENST00000493207 KANK4Q5T7N3 995 aaPredicted RBP26.45■■□□□ 1.82
RER1-208ENST00000493207 PREX2Q70Z35 1606 aa26.45■■□□□ 1.82
RER1-208ENST00000493207 CDC42BPBQ9Y5S2 1711 aa26.45■■□□□ 1.82
RER1-208ENST00000493207 FANCAO15360 1455 aa26.44■■□□□ 1.82
RER1-208ENST00000493207 NEO1Q92859 1461 aa26.43■■□□□ 1.82
RER1-208ENST00000493207 ARAP3Q8WWN8 1544 aa26.43■■□□□ 1.82
RER1-208ENST00000493207 ARHGAP5Q13017 1502 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms