RNA–Protein interactions for RNA: ENST00000493082.5

BRD9-210, Transcript of bromodomain containing 9, humanhuman

TSL 5

Gene BRD9, Length 750 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-210ENST00000493082 SHROOM2Q13796 1616 aa21.72■■□□□ 1.07
BRD9-210ENST00000493082 IQGAP2Q13576 1575 aa21.7■■□□□ 1.06
BRD9-210ENST00000493082 GOLGA3Q08378 1498 aa21.69■■□□□ 1.06
BRD9-210ENST00000493082 KIAA0586Q9BVV6 1533 aa21.69■■□□□ 1.06
BRD9-210ENST00000493082 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
BRD9-210ENST00000493082 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
BRD9-210ENST00000493082 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
BRD9-210ENST00000493082 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
BRD9-210ENST00000493082 DNAJC5Q9H3Z4 198 aa21.64■■□□□ 1.05
BRD9-210ENST00000493082 ARHGEF11O15085 1522 aa21.62■■□□□ 1.05
BRD9-210ENST00000493082 JPH4Q96JJ6 628 aa21.57■■□□□ 1.04
BRD9-210ENST00000493082 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
BRD9-210ENST00000493082 PRG4Q92954 1404 aaPredicted RBP21.55■■□□□ 1.04
BRD9-210ENST00000493082 UGGT2Q9NYU1 1516 aa21.55■■□□□ 1.04
BRD9-210ENST00000493082 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
BRD9-210ENST00000493082 KIAA0556O60303 1618 aa21.51■■□□□ 1.03
BRD9-210ENST00000493082 DISP1Q96F81 1524 aa21.51■■□□□ 1.03
BRD9-210ENST00000493082 RANGAP1P46060 587 aaPredicted RBP21.51■■□□□ 1.03
BRD9-210ENST00000493082 ARAP1Q96P48 1450 aa21.49■■□□□ 1.03
BRD9-210ENST00000493082 SAMD9Q5K651 1589 aa21.48■■□□□ 1.03
BRD9-210ENST00000493082 TNIKQ9UKE5 1360 aa21.43■■□□□ 1.02
BRD9-210ENST00000493082 CARMIL2Q6F5E8 1435 aa21.4■■□□□ 1.02
BRD9-210ENST00000493082 P3H3Q8IVL6 736 aa21.4■■□□□ 1.02
BRD9-210ENST00000493082 TTBK1Q5TCY1 1321 aaPredicted RBP21.39■■□□□ 1.01
BRD9-210ENST00000493082 EFCAB5A4FU69 1503 aa21.37■■□□□ 1.01
BRD9-210ENST00000493082 ARHGAP35Q9NRY4 1499 aa21.37■■□□□ 1.01
BRD9-210ENST00000493082 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
BRD9-210ENST00000493082 CYB5RLQ6IPT4 315 aa21.34■■□□□ 1.01
BRD9-210ENST00000493082 CEP162Q5TB80 1403 aa21.31■■□□□ 1
BRD9-210ENST00000493082 PTPRGP23470 1445 aa21.29■■□□□ 1
BRD9-210ENST00000493082 CLIP1P30622 1438 aa21.29■■□□□ 1
BRD9-210ENST00000493082 ADCY10Q96PN6 1610 aa21.29■■□□□ 1
BRD9-210ENST00000493082 PLB1Q6P1J6 1458 aa21.25■□□□□ 0.99
BRD9-210ENST00000493082 ABCA8O94911 1581 aa21.24■□□□□ 0.99
BRD9-210ENST00000493082 RAPGEF6Q8TEU7 1601 aa21.22■□□□□ 0.99
BRD9-210ENST00000493082 LRRIQ1Q96JM4 1722 aa21.21■□□□□ 0.99
BRD9-210ENST00000493082 UACAQ9BZF9 1416 aa21.19■□□□□ 0.98
BRD9-210ENST00000493082 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
BRD9-210ENST00000493082 PCF11O94913 1555 aaKnown RBP21.18■□□□□ 0.98
BRD9-210ENST00000493082 ZCCHC11Q5TAX3 1644 aaKnown RBP21.15■□□□□ 0.98
BRD9-210ENST00000493082 UHRF1BP1LA0JNW5 1464 aa21.14■□□□□ 0.98
BRD9-210ENST00000493082 FMN1Q68DA7 1419 aa21.11■□□□□ 0.97
BRD9-210ENST00000493082 NUP153P49790 1475 aaKnown RBP21.1■□□□□ 0.97
BRD9-210ENST00000493082 ARID3CA6NKF2 412 aa21.1■□□□□ 0.97
BRD9-210ENST00000493082 HECW1Q76N89 1606 aa21.09■□□□□ 0.97
BRD9-210ENST00000493082 KDM5BQ9UGL1 1544 aa21.06■□□□□ 0.96
BRD9-210ENST00000493082 CDK13Q14004 1512 aaKnown RBP21.05■□□□□ 0.96
BRD9-210ENST00000493082 ATP10BO94823 1461 aa21.03■□□□□ 0.96
BRD9-210ENST00000493082 CASKIN1Q8WXD9 1431 aa21.03■□□□□ 0.96
BRD9-210ENST00000493082 ATP1B4Q9UN42 357 aaPredicted RBP21.02■□□□□ 0.96
BRD9-210ENST00000493082 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
BRD9-210ENST00000493082 VPS8Q8N3P4 1428 aa21■□□□□ 0.95
BRD9-210ENST00000493082 EPRSP07814 1512 aaKnown RBP20.99■□□□□ 0.95
BRD9-210ENST00000493082 KIF13AQ9H1H9 1805 aa20.99■□□□□ 0.95
BRD9-210ENST00000493082 MAPKBP1O60336 1514 aa20.99■□□□□ 0.95
BRD9-210ENST00000493082 NPM1P06748 294 aaKnown RBP eCLIP20.96■□□□□ 0.95
BRD9-210ENST00000493082 CFAP43Q8NDM7 1665 aa20.95■□□□□ 0.94
BRD9-210ENST00000493082 ASXL2Q76L83 1435 aa20.95■□□□□ 0.94
BRD9-210ENST00000493082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.91■□□□□ 0.94
BRD9-210ENST00000493082 HNRNPUL2Q1KMD3 747 aaKnown RBP20.91■□□□□ 0.94
BRD9-210ENST00000493082 MAGI3Q5TCQ9 1506 aa20.91■□□□□ 0.94
BRD9-210ENST00000493082 DIP2BQ9P265 1576 aa20.9■□□□□ 0.94
BRD9-210ENST00000493082 CCDC18Q5T9S5 1454 aa20.89■□□□□ 0.94
BRD9-210ENST00000493082 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
BRD9-210ENST00000493082 TIAM1Q13009 1591 aa20.87■□□□□ 0.93
BRD9-210ENST00000493082 TSPOAP1O95153 1857 aa20.87■□□□□ 0.93
BRD9-210ENST00000493082 KIF14Q15058 1648 aa20.86■□□□□ 0.93
BRD9-210ENST00000493082 ABCC10Q5T3U5 1492 aa20.83■□□□□ 0.93
BRD9-210ENST00000493082 KCNH8Q96L42 1107 aa20.8■□□□□ 0.92
BRD9-210ENST00000493082 TTC37Q6PGP7 1564 aa20.79■□□□□ 0.92
BRD9-210ENST00000493082 MAP3K4Q9Y6R4 1608 aa20.78■□□□□ 0.92
BRD9-210ENST00000493082 PPRC1Q5VV67 1664 aaKnown RBP20.78■□□□□ 0.92
BRD9-210ENST00000493082 GLI2P10070 1586 aa20.78■□□□□ 0.92
BRD9-210ENST00000493082 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
BRD9-210ENST00000493082 PLEKHD1A6NEE1 506 aa20.77■□□□□ 0.92
BRD9-210ENST00000493082 TRHP20396 242 aaPredicted RBP20.77■□□□□ 0.92
BRD9-210ENST00000493082 ABCA9Q8IUA7 1624 aa20.77■□□□□ 0.92
BRD9-210ENST00000493082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.76■□□□□ 0.91
BRD9-210ENST00000493082 FAM69CQ0P6D2 419 aa20.75■□□□□ 0.91
BRD9-210ENST00000493082 MAP3K1Q13233 1512 aa20.74■□□□□ 0.91
BRD9-210ENST00000493082 EHBP1L1Q8N3D4 1523 aa20.74■□□□□ 0.91
BRD9-210ENST00000493082 KANK4Q5T7N3 995 aaPredicted RBP20.72■□□□□ 0.91
BRD9-210ENST00000493082 LRRC9Q6ZRR7 1453 aa20.72■□□□□ 0.91
BRD9-210ENST00000493082 CDC42BPAQ5VT25 1732 aa20.72■□□□□ 0.91
BRD9-210ENST00000493082 MYO5CQ9NQX4 1742 aa20.72■□□□□ 0.91
BRD9-210ENST00000493082 SUPT6HQ7KZ85 1726 aaKnown RBP20.71■□□□□ 0.91
BRD9-210ENST00000493082 MTUS2Q5JR59 1369 aa20.71■□□□□ 0.91
BRD9-210ENST00000493082 CDK11AQ9UQ88 783 aaPredicted RBP20.7■□□□□ 0.9
BRD9-210ENST00000493082 CDC42BPBQ9Y5S2 1711 aa20.69■□□□□ 0.9
BRD9-210ENST00000493082 APLP2Q06481 763 aa20.65■□□□□ 0.9
BRD9-210ENST00000493082 PREX2Q70Z35 1606 aa20.64■□□□□ 0.9
BRD9-210ENST00000493082 PPARGC1BQ86YN6 1023 aaKnown RBP20.64■□□□□ 0.89
BRD9-210ENST00000493082 CD109Q6YHK3 1445 aa20.63■□□□□ 0.89
BRD9-210ENST00000493082 NCOA2Q15596 1464 aa20.62■□□□□ 0.89
BRD9-210ENST00000493082 ITSN2Q9NZM3 1697 aa20.6■□□□□ 0.89
BRD9-210ENST00000493082 ARHGAP5Q13017 1502 aa20.55■□□□□ 0.88
BRD9-210ENST00000493082 GPATCH8Q9UKJ3 1502 aaKnown RBP20.55■□□□□ 0.88
BRD9-210ENST00000493082 PLCH2O75038 1416 aa20.54■□□□□ 0.88
BRD9-210ENST00000493082 CFAP74Q9C0B2 1584 aa20.53■□□□□ 0.88
BRD9-210ENST00000493082 CCNB3Q8WWL7 1395 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms