RNA–Protein interactions for RNA: ENST00000492663.1

MDH2-208, Transcript of malate dehydrogenase 2, humanhuman

TSL 2

Gene MDH2, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH2-208ENST00000492663 MAP3K1Q13233 1512 aa13.01□□□□□ -0.33
MDH2-208ENST00000492663 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
MDH2-208ENST00000492663 ANP32CO43423 234 aa13□□□□□ -0.33
MDH2-208ENST00000492663 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
MDH2-208ENST00000492663 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
MDH2-208ENST00000492663 ARAP1Q96P48 1450 aa12.96□□□□□ -0.34
MDH2-208ENST00000492663 PRXQ9BXM0 1461 aa12.96□□□□□ -0.34
MDH2-208ENST00000492663 CADPSQ9ULU8 1353 aa12.95□□□□□ -0.34
MDH2-208ENST00000492663 BIVM-ERCC5R4GMW8 1640 aa12.95□□□□□ -0.34
MDH2-208ENST00000492663 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
MDH2-208ENST00000492663 SETD5Q9C0A6 1442 aa12.95□□□□□ -0.34
MDH2-208ENST00000492663 BCANQ96GW7 911 aa12.94□□□□□ -0.34
MDH2-208ENST00000492663 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
MDH2-208ENST00000492663 RAB3GAP2Q9H2M9 1393 aa12.9□□□□□ -0.34
MDH2-208ENST00000492663 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
MDH2-208ENST00000492663 MAPKBP1O60336 1514 aa12.88□□□□□ -0.35
MDH2-208ENST00000492663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.85□□□□□ -0.35
MDH2-208ENST00000492663 KANK4Q5T7N3 995 aaPredicted RBP12.85□□□□□ -0.35
MDH2-208ENST00000492663 PPP4R2Q9NY27 417 aa12.85□□□□□ -0.35
MDH2-208ENST00000492663 KIF21AQ7Z4S6 1674 aa12.85□□□□□ -0.35
MDH2-208ENST00000492663 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
MDH2-208ENST00000492663 WDR62O43379 1518 aa12.84□□□□□ -0.35
MDH2-208ENST00000492663 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
MDH2-208ENST00000492663 KCNH8Q96L42 1107 aa12.82□□□□□ -0.36
MDH2-208ENST00000492663 MSH5O43196 834 aa12.81□□□□□ -0.36
MDH2-208ENST00000492663 TIAM1Q13009 1591 aa12.81□□□□□ -0.36
MDH2-208ENST00000492663 FANCD2Q9BXW9 1451 aa12.79□□□□□ -0.36
MDH2-208ENST00000492663 FHAD1B1AJZ9 1412 aa12.79□□□□□ -0.36
MDH2-208ENST00000492663 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
MDH2-208ENST00000492663 DEKP35659 375 aaKnown RBP12.76□□□□□ -0.37
MDH2-208ENST00000492663 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
MDH2-208ENST00000492663 TRIM52Q96A61 297 aa12.75□□□□□ -0.37
MDH2-208ENST00000492663 LRRC9Q6ZRR7 1453 aa12.74□□□□□ -0.37
MDH2-208ENST00000492663 TONSLQ96HA7 1378 aa12.74□□□□□ -0.37
MDH2-208ENST00000492663 ITGAEP38570 1179 aa12.74□□□□□ -0.37
MDH2-208ENST00000492663 RANGAP1P46060 587 aaPredicted RBP12.73□□□□□ -0.37
MDH2-208ENST00000492663 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
MDH2-208ENST00000492663 HNRNPUQ00839 825 aaKnown RBP eCLIP12.71□□□□□ -0.37
MDH2-208ENST00000492663 NOP58Q9Y2X3 529 aaKnown RBP12.71□□□□□ -0.37
MDH2-208ENST00000492663 RTL5Q5HYW3 569 aaPredicted RBP12.7□□□□□ -0.38
MDH2-208ENST00000492663 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
MDH2-208ENST00000492663 CFTRP13569 1480 aa12.68□□□□□ -0.38
MDH2-208ENST00000492663 SIN3AQ96ST3 1273 aa12.68□□□□□ -0.38
MDH2-208ENST00000492663 ANP32AP39687 249 aaKnown RBP12.67□□□□□ -0.38
MDH2-208ENST00000492663 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.384e-11■■■■□ 26.6
MDH2-208ENST00000492663 UACAQ9BZF9 1416 aa12.65□□□□□ -0.38
MDH2-208ENST00000492663 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.38
MDH2-208ENST00000492663 FBLN2P98095 1184 aa12.64□□□□□ -0.39
MDH2-208ENST00000492663 FAM50AQ14320 339 aaKnown RBP12.64□□□□□ -0.39
MDH2-208ENST00000492663 ZBED9Q6R2W3 1325 aa12.63□□□□□ -0.39
MDH2-208ENST00000492663 USP35Q9P2H5 1018 aa12.63□□□□□ -0.39
MDH2-208ENST00000492663 CUX1P39880 1505 aa12.62□□□□□ -0.39
MDH2-208ENST00000492663 URB2Q14146 1524 aaKnown RBP12.62□□□□□ -0.39
MDH2-208ENST00000492663 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
MDH2-208ENST00000492663 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
MDH2-208ENST00000492663 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
MDH2-208ENST00000492663 PHLDB1Q86UU1 1377 aa12.61□□□□□ -0.39
MDH2-208ENST00000492663 IPO9Q96P70 1041 aaKnown RBP12.6□□□□□ -0.39
MDH2-208ENST00000492663 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
MDH2-208ENST00000492663 ARHGEF11O15085 1522 aa12.6□□□□□ -0.39
MDH2-208ENST00000492663 PRDM2Q13029 1718 aa12.59□□□□□ -0.39
MDH2-208ENST00000492663 NCOA2Q15596 1464 aa12.59□□□□□ -0.39
MDH2-208ENST00000492663 RIMBP3CA6NJZ7 1639 aa12.59□□□□□ -0.39
MDH2-208ENST00000492663 RIMBP3BA6NNM3 1639 aa12.59□□□□□ -0.39
MDH2-208ENST00000492663 RIMBP3Q9UFD9 1639 aa12.59□□□□□ -0.39
MDH2-208ENST00000492663 HFM1A2PYH4 1435 aa12.59□□□□□ -0.39
MDH2-208ENST00000492663 CNTLNQ9NXG0 1405 aa12.59□□□□□ -0.39
MDH2-208ENST00000492663 CCDC18Q5T9S5 1454 aa12.58□□□□□ -0.4
MDH2-208ENST00000492663 CASKIN1Q8WXD9 1431 aa12.57□□□□□ -0.4
MDH2-208ENST00000492663 EIF4G2P78344 907 aaKnown RBP eCLIP12.57□□□□□ -0.4
MDH2-208ENST00000492663 ZNF608Q9ULD9 1512 aaPredicted RBP12.56□□□□□ -0.4
MDH2-208ENST00000492663 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
MDH2-208ENST00000492663 SMG6Q86US8 1419 aaKnown RBP12.55□□□□□ -0.4
MDH2-208ENST00000492663 IGF1RP08069 1367 aa12.55□□□□□ -0.4
MDH2-208ENST00000492663 FMN1Q68DA7 1419 aa12.54□□□□□ -0.4
MDH2-208ENST00000492663 FGD5Q6ZNL6 1462 aa12.54□□□□□ -0.4
MDH2-208ENST00000492663 PTPN23Q9H3S7 1636 aa12.54□□□□□ -0.4
MDH2-208ENST00000492663 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
MDH2-208ENST00000492663 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
MDH2-208ENST00000492663 PCF11O94913 1555 aaKnown RBP12.52□□□□□ -0.41
MDH2-208ENST00000492663 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
MDH2-208ENST00000492663 IRX6P78412 446 aaPredicted RBP12.5□□□□□ -0.41
MDH2-208ENST00000492663 CCDC136Q96JN2 1154 aa12.5□□□□□ -0.41
MDH2-208ENST00000492663 PRKRIP1Q9H875 184 aaPredicted RBP12.5□□□□□ -0.41
MDH2-208ENST00000492663 RNF123Q5XPI4 1314 aa12.5□□□□□ -0.41
MDH2-208ENST00000492663 AKNAQ7Z591 1439 aa12.5□□□□□ -0.41
MDH2-208ENST00000492663 ABCA5Q8WWZ7 1642 aa12.5□□□□□ -0.41
MDH2-208ENST00000492663 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
MDH2-208ENST00000492663 B4GALNT3Q6L9W6 998 aa12.49□□□□□ -0.41
MDH2-208ENST00000492663 HIRIP3Q9BW71 556 aaPredicted RBP12.49□□□□□ -0.41
MDH2-208ENST00000492663 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
MDH2-208ENST00000492663 WASHC2AQ641Q2 1341 aa12.48□□□□□ -0.41
MDH2-208ENST00000492663 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
MDH2-208ENST00000492663 TCERG1O14776 1098 aaKnown RBP12.48□□□□□ -0.41
MDH2-208ENST00000492663 HECW1Q76N89 1606 aa12.48□□□□□ -0.41
MDH2-208ENST00000492663 NCOA1Q15788 1441 aa12.47□□□□□ -0.41
MDH2-208ENST00000492663 CCDC7Q96M83 1385 aa12.47□□□□□ -0.41
MDH2-208ENST00000492663 MS4A1P11836 297 aa12.47□□□□□ -0.41
MDH2-208ENST00000492663 NBR1Q14596 966 aa12.47□□□□□ -0.41
MDH2-208ENST00000492663 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms