RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 URB2Q14146 1524 aaKnown RBP6.64□□□□□ -1.35
TRA2B-215ENST00000492417 MTUS2Q5JR59 1369 aa6.64□□□□□ -1.35
TRA2B-215ENST00000492417 SYNJ1O43426 1573 aa6.64□□□□□ -1.35
TRA2B-215ENST00000492417 CEP162Q5TB80 1403 aa6.64□□□□□ -1.35
TRA2B-215ENST00000492417 RAPGEF2Q9Y4G8 1499 aa6.63□□□□□ -1.35
TRA2B-215ENST00000492417 ZNF608Q9ULD9 1512 aaPredicted RBP6.63□□□□□ -1.35
TRA2B-215ENST00000492417 IFT140Q96RY7 1462 aa6.63□□□□□ -1.35
TRA2B-215ENST00000492417 TNIKQ9UKE5 1360 aa6.62□□□□□ -1.35
TRA2B-215ENST00000492417 CARMIL2Q6F5E8 1435 aa6.61□□□□□ -1.35
TRA2B-215ENST00000492417 GRIN2BQ13224 1484 aa6.61□□□□□ -1.35
TRA2B-215ENST00000492417 DNMBPQ6XZF7 1577 aa6.6□□□□□ -1.35
TRA2B-215ENST00000492417 SNAPC4Q5SXM2 1469 aa6.6□□□□□ -1.35
TRA2B-215ENST00000492417 FHOD3Q2V2M9 1422 aa6.6□□□□□ -1.35
TRA2B-215ENST00000492417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.59□□□□□ -1.352e-9■□□□□ 10.7
TRA2B-215ENST00000492417 ESF1Q9H501 851 aaKnown RBP6.59□□□□□ -1.36
TRA2B-215ENST00000492417 CFDP1Q9UEE9 299 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-215ENST00000492417 PTPRGP23470 1445 aa6.58□□□□□ -1.36
TRA2B-215ENST00000492417 ARID4BQ4LE39 1312 aaPredicted RBP6.58□□□□□ -1.36
TRA2B-215ENST00000492417 TSPY4P0CV99 314 aa6.57□□□□□ -1.36
TRA2B-215ENST00000492417 TSPY10P0CW01 314 aa6.57□□□□□ -1.36
TRA2B-215ENST00000492417 SENP3Q9H4L4 574 aaPredicted RBP6.57□□□□□ -1.36
TRA2B-215ENST00000492417 FHAD1B1AJZ9 1412 aa6.57□□□□□ -1.36
TRA2B-215ENST00000492417 KIF21AQ7Z4S6 1674 aa6.56□□□□□ -1.36
TRA2B-215ENST00000492417 NEUROD1Q13562 356 aa6.56□□□□□ -1.36
TRA2B-215ENST00000492417 TOP2BQ02880 1626 aa6.56□□□□□ -1.36
TRA2B-215ENST00000492417 MLECQ14165 292 aa6.56□□□□□ -1.36
TRA2B-215ENST00000492417 RRP7BPQ9NSQ0 103 aa6.56□□□□□ -1.36
TRA2B-215ENST00000492417 KANK4Q5T7N3 995 aaPredicted RBP6.55□□□□□ -1.36
TRA2B-215ENST00000492417 PRG4Q92954 1404 aaPredicted RBP6.54□□□□□ -1.36
TRA2B-215ENST00000492417 CHGAP10645 457 aaKnown RBP6.54□□□□□ -1.36
TRA2B-215ENST00000492417 ZNF326Q5BKZ1 582 aaKnown RBP6.54□□□□□ -1.36
TRA2B-215ENST00000492417 POLR3GLQ9BT43 218 aa6.54□□□□□ -1.36
TRA2B-215ENST00000492417 CENPBP07199 599 aaPredicted RBP6.54□□□□□ -1.36
TRA2B-215ENST00000492417 BCANQ96GW7 911 aa6.54□□□□□ -1.36
TRA2B-215ENST00000492417 FAM69CQ0P6D2 419 aa6.53□□□□□ -1.36
TRA2B-215ENST00000492417 ABCA10Q8WWZ4 1543 aa6.53□□□□□ -1.36
TRA2B-215ENST00000492417 CNGB1Q14028 1251 aaPredicted RBP6.52□□□□□ -1.37
TRA2B-215ENST00000492417 STAG3Q9UJ98 1225 aa6.5□□□□□ -1.37
TRA2B-215ENST00000492417 CCNB3Q8WWL7 1395 aa6.5□□□□□ -1.37
TRA2B-215ENST00000492417 FMN1Q68DA7 1419 aa6.49□□□□□ -1.37
TRA2B-215ENST00000492417 SYNJ2O15056 1496 aa6.49□□□□□ -1.37
TRA2B-215ENST00000492417 HNRNPMP52272 730 aaKnown RBP eCLIP6.48□□□□□ -1.372e-8■■■■□ 20.6
TRA2B-215ENST00000492417 SLC24A1O60721 1099 aa6.48□□□□□ -1.37
TRA2B-215ENST00000492417 EFCAB2Q5VUJ9 269 aa6.48□□□□□ -1.37
TRA2B-215ENST00000492417 GRIN2AQ12879 1464 aa6.47□□□□□ -1.37
TRA2B-215ENST00000492417 GGT6Q6P531 493 aa6.47□□□□□ -1.37
TRA2B-215ENST00000492417 ERICH6Q7L0X2 663 aa6.47□□□□□ -1.37
TRA2B-215ENST00000492417 VPS8Q8N3P4 1428 aa6.47□□□□□ -1.37
TRA2B-215ENST00000492417 WDR62O43379 1518 aa6.46□□□□□ -1.37
TRA2B-215ENST00000492417 MAGI1Q96QZ7 1491 aaPredicted RBP6.46□□□□□ -1.37
TRA2B-215ENST00000492417 PRXQ9BXM0 1461 aa6.46□□□□□ -1.37
TRA2B-215ENST00000492417 SLC4A1APQ9BWU0 796 aaKnown RBP6.46□□□□□ -1.38
TRA2B-215ENST00000492417 PRDM2Q13029 1718 aa6.44□□□□□ -1.38
TRA2B-215ENST00000492417 KIAA0586Q9BVV6 1533 aa6.44□□□□□ -1.38
TRA2B-215ENST00000492417 ZEB1P37275 1124 aaPredicted RBP6.43□□□□□ -1.38
TRA2B-215ENST00000492417 ZNF644Q9H582 1327 aaPredicted RBP6.43□□□□□ -1.38
TRA2B-215ENST00000492417 ERICH3Q5RHP9 1530 aa6.43□□□□□ -1.38
TRA2B-215ENST00000492417 BIVM-ERCC5R4GMW8 1640 aa6.43□□□□□ -1.38
TRA2B-215ENST00000492417 KDM2AQ9Y2K7 1162 aa6.43□□□□□ -1.38
TRA2B-215ENST00000492417 EIF4G3O43432 1585 aaKnown RBP6.43□□□□□ -1.38
TRA2B-215ENST00000492417 RGL3Q3MIN7 710 aa6.42□□□□□ -1.38
TRA2B-215ENST00000492417 ARHGAP35Q9NRY4 1499 aa6.41□□□□□ -1.38
TRA2B-215ENST00000492417 PLB1Q6P1J6 1458 aa6.41□□□□□ -1.38
TRA2B-215ENST00000492417 ARAP1Q96P48 1450 aa6.41□□□□□ -1.38
TRA2B-215ENST00000492417 KIF3BO15066 747 aa6.41□□□□□ -1.38
TRA2B-215ENST00000492417 AFAP1Q8N556 730 aa6.4□□□□□ -1.38
TRA2B-215ENST00000492417 SPAG9O60271 1321 aaKnown RBP6.4□□□□□ -1.38
TRA2B-215ENST00000492417 RAPGEF3O95398 923 aa6.4□□□□□ -1.39
TRA2B-215ENST00000492417 IQGAP2Q13576 1575 aa6.39□□□□□ -1.39
TRA2B-215ENST00000492417 UACAQ9BZF9 1416 aa6.39□□□□□ -1.39
TRA2B-215ENST00000492417 FOXD1Q16676 465 aa6.39□□□□□ -1.39
TRA2B-215ENST00000492417 CCDC18Q5T9S5 1454 aa6.39□□□□□ -1.39
TRA2B-215ENST00000492417 THOC2Q8NI27 1593 aaKnown RBP6.39□□□□□ -1.39
TRA2B-215ENST00000492417 KIF21BO75037 1637 aa6.38□□□□□ -1.39
TRA2B-215ENST00000492417 PPP1R15AO75807 674 aaPredicted RBP6.38□□□□□ -1.39
TRA2B-215ENST00000492417 CUL7Q14999 1698 aa6.36□□□□□ -1.39
TRA2B-215ENST00000492417 HRCP23327 699 aa6.36□□□□□ -1.39
TRA2B-215ENST00000492417 PLEKHG5O94827 1062 aa6.36□□□□□ -1.39
TRA2B-215ENST00000492417 CDK13Q14004 1512 aaKnown RBP6.35□□□□□ -1.39
TRA2B-215ENST00000492417 TARBP1Q13395 1621 aaKnown RBP6.35□□□□□ -1.39
TRA2B-215ENST00000492417 DNAJC5Q9H3Z4 198 aa6.35□□□□□ -1.39
TRA2B-215ENST00000492417 ADAMTS12P58397 1594 aa6.35□□□□□ -1.39
TRA2B-215ENST00000492417 SIN3AQ96ST3 1273 aa6.34□□□□□ -1.39
TRA2B-215ENST00000492417 CASKIN1Q8WXD9 1431 aa6.34□□□□□ -1.39
TRA2B-215ENST00000492417 WASHC2CQ9Y4E1 1318 aa6.34□□□□□ -1.39
TRA2B-215ENST00000492417 NUTM2DQ5VT03 806 aaPredicted RBP6.34□□□□□ -1.39
TRA2B-215ENST00000492417 TONSLQ96HA7 1378 aa6.33□□□□□ -1.4
TRA2B-215ENST00000492417 C14orf37Q86TY3 774 aa6.33□□□□□ -1.4
TRA2B-215ENST00000492417 HIRIP3Q9BW71 556 aaPredicted RBP6.33□□□□□ -1.4
TRA2B-215ENST00000492417 PKD2Q13563 968 aa6.33□□□□□ -1.4
TRA2B-215ENST00000492417 PHLDB1Q86UU1 1377 aa6.33□□□□□ -1.4
TRA2B-215ENST00000492417 NUP155O75694 1391 aa6.32□□□□□ -1.4
TRA2B-215ENST00000492417 YTHDC1Q96MU7 727 aaKnown RBP6.32□□□□□ -1.4
TRA2B-215ENST00000492417 NUP160Q12769 1436 aa6.32□□□□□ -1.4
TRA2B-215ENST00000492417 KCNA4P22459 653 aa6.32□□□□□ -1.4
TRA2B-215ENST00000492417 ANKRD30AQ9BXX3 1397 aa6.31□□□□□ -1.4
TRA2B-215ENST00000492417 CD109Q6YHK3 1445 aa6.31□□□□□ -1.4
TRA2B-215ENST00000492417 ABCA5Q8WWZ7 1642 aa6.31□□□□□ -1.4
TRA2B-215ENST00000492417 PBRM1Q86U86 1689 aa6.31□□□□□ -1.4
TRA2B-215ENST00000492417 RSPH4AQ5TD94 716 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms